Gambusia affinis (western mosquitofish): 122837219
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Entry
122837219 CDS
T07758
Symbol
gabra4
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-4
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04080
Neuroactive ligand-receptor interaction
gaf04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122837219 (gabra4)
04082 Neuroactive ligand signaling
122837219 (gabra4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122837219 (gabra4)
Ion channels [BR:
gaf04040
]
Ligand-gated channels
GABA-A
122837219 (gabra4)
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
122837219
NCBI-ProteinID:
XP_043983347
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Position
LG09:5327146..5366498
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AA seq
556 aa
AA seq
DB search
MLFAKKKEMVTATRPAFIRTLVYFFCLTTCAKTISGQARKDERIYPENFTRILDRLLDGY
DNRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLMYEGPVEILRL
NNLMVTKVWTPDTFFRNGKRSVAHNMTAPNKLFRIMKNGTILYTMRLTINAECPMKLVDF
PMDGHACPLKFGSYAYPKTEMIYTWTKGPQHSVEVPPESSSLVQYDLIGQTVSSETIKSI
TGEYVVMTVYFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTM
TTLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAQIERAKKKPGKCP
PVPQSTPVKVKDTEEVQQQVPDTNGSLRKRVNYVSHQDPAGQPRAQSTTNISGLGRGRRL
RALAGGANGSSSTLSRASPKSESLLSVASSSAQLVKGTPQPAASSPDVMAGTPGRPPASP
ASLQHLLGPKLERIQMMGNKLEPKQTPCSQPTAAGMGGTSKIDKYARILFPVSFGAFNMV
YWVVYLSKDTMVAKGG
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgctgttcgcaaagaagaaggagatggtgacggcgacgcgacccgcgttcattcggacc
ctggtctactttttctgtttgacgacttgtgcgaaaacaatctccggacaagcaaggaag
gatgagaggatttacccggagaattttactcggattttggaccgactcctggacggctac
gacaacaggctgcgacctggattcggaggtcctgtgacagaggtgaaaactgacatttat
gtgacgagctttgggccagtctcagacgttgaaatggaatacactatggatgtattcttt
cggcagacctgggttgatcggaggttgatgtacgagggtccagtggagatactgagactc
aacaatctgatggtgaccaaggtctggacaccggacactttcttcaggaacggcaagcgg
tcggtcgcccacaacatgaccgcgcccaacaagctcttccgcatcatgaagaacggcacc
atcctttacaccatgaggttgaccattaacgccgagtgtcccatgaagctggtggatttc
cccatggacggacatgcctgccccctcaagtttggaagctacgcctatcccaaaacggag
atgatctacacttggaccaaagggcctcagcattcggtggaggtccctcccgagtcctcc
agcctcgtccagtatgatctcatcggccagacggtttccagcgagaccattaaatcaatc
acaggtgaatatgtggtgatgacggtctacttccacttgaagcggaagatgggctacttc
atgattcagacctacatcccctgcataatgacagtgatcctctctcaagtgtccttctgg
ataaacaaggagtcggtcccggcgcggaccgtttttggcatcaccaccgtcctgaccatg
acgacactcagcatcagcgcccgccactctctccccaaggtctcgtacgcaactgccatg
gactggttcatcgccgtctgcttcgcctttgtcttctctgccctcatcgagtttgctgcc
gtcaactatttcaccaacgcacagattgagagggccaagaagaagccaggcaagtgtccc
cccgtgccccaaagcacgcccgtcaaggtgaaggacacagaggaagtgcagcagcaagtt
cccgacaccaacggttccctgaggaaacgggtgaactacgtctcacaccaagacccggcg
ggccagccgagagcccagtccaccaccaacatctcagggctgggaagaggaaggcggctg
agagctctggctggcggcgccaacggcagctcctccaccctctcccgcgccagccccaag
tccgagagcctgctgagcgtggcctcgtcctcggcgcagctggtgaagggcacgcctcag
cccgcggcgtccagcccggacgtgatggcggggacgccgggccggcctcccgccagcccg
gcatctctgcagcacctgctcgggcccaagctggagcgcatccagatgatgggcaacaag
ctggagccgaaacagacgccgtgctcccagccgaccgccgccggcatgggcggaaccagc
aaaattgacaaatacgcccggatcctgttcccagtgtcctttggggcgttcaacatggtc
tactgggtggtctacctgtcgaaagacacaatggtggccaaaggcgggtaa
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