Gambusia affinis (western mosquitofish): 122837354
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Entry
122837354 CDS
T07758
Symbol
sox3
Name
(RefSeq) transcription factor Sox-3
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122837354 (sox3)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122837354 (sox3)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
122837354
NCBI-ProteinID:
XP_043983597
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Position
LG09:complement(23343004..23344859)
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AA seq
300 aa
AA seq
DB search
MYNMMETEIKTPLPQSNSGSAPGAKNNSASDQERVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LPGGLLAPGSNAVNNSVSVGQRMDGYAHMNGWTNSAYSLMQDQLAYPQHHSMNSPQIQQM
HRYEMAGLQYPMMSSAQTYMNAASTYSMSPAYTQQTTSAMGLSSMASVCKTEPSSPPPAI
TSHSQRACLGDLRDMISMYLPPGGDSAEHSSLQSSRLHSVHPHYQTAGTGVNGTLPLTHI
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaaccgagatcaagacccctctcccgcagtccaactcgggctcg
gcgccgggcgcaaagaacaacagcgccagcgaccaggagcgggtgaagcggccgatgaac
gcctttatggtctggtccaggggccagcggaggaagatggctcaagaaaaccccaaaatg
cacaactctgaaattagcaagcggctcggtgctgactggaaacttctgaccgacgccgaa
aaaaggccgttcattgacgaggccaagcgtctacgggcgatgcacatgaaggagcacccg
gattataaataccggccccgcaggaagaccaagaccttgctcaagaaagacaagtattct
ctgcccgggggactgctggcgccgggatccaacgccgttaacaactcggtgtcggtgggc
cagcggatggacggttacgcgcacatgaacggctggacaaacagcgcgtactccctgatg
caggaccagctggcctaccctcaacatcacagcatgaacagcccgcagatccagcagatg
caccggtacgagatggccggccttcagtacccgatgatgtcctctgcgcagacctacatg
aacgcggcgtccacctacagcatgtccccggcgtacacgcaacagaccaccagcgccatg
gggctgagctccatggcgtccgtgtgtaagacggagccgagctcgccgccgccggccatc
acgtcccactctcagcgggcgtgcttgggggacctgagggacatgatcagcatgtacctg
ccccccggcggggacagcgcggagcattcctccctgcagagcagccggttacacagcgtc
catccacactatcagaccgcagggactggcgtcaacgggacgctacctctcacccacatc
tga
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