Gambusia affinis (western mosquitofish): 122837376
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Entry
122837376 CDS
T07758
Symbol
nr3c1
Name
(RefSeq) glucocorticoid receptor
KO
K05771
glucocorticoid receptor
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122837376 (nr3c1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122837376 (nr3c1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
gaf03310
]
122837376 (nr3c1)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
122837376 (nr3c1)
Nuclear receptors [BR:
gaf03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
122837376 (nr3c1)
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
GCR
Motif
Other DBs
NCBI-GeneID:
122837376
NCBI-ProteinID:
XP_043983634
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Position
LG09:complement(11904838..11932303)
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AA seq
767 aa
AA seq
DB search
MDQGGVKKIAYRRNDHLSKLVYTESPEEGGLLKVAPHSAMSITSPPSVVLPSSPLMQPGQ
VTNGLSNSPLPEELASAPATIGSSVDSSETRGLTKDQRPEELQLFQTQTFNTFGHQVLPQ
LDASMADITQSSMDSLIGGSDPNLFAVKTEDFSVDKGEQDPNDLDHAFDHIGKDVEMNQK
LFNETSLDLLQEFDLTASPSDFYVGDDDAFLSTLAEDSFLAVGEMRGTTERDVKPSVVES
VGTTRVCDSSKASSPLESKSKSPSLTPTTTFPAVVKKEKDTGFIQLCTPGVIKKEKTSSG
YCQMSGSSPISICGVSTSGGQSFHFGINARNSDALQEKDQKPVSGLFLPVTTISGAWNRN
QADSAAIRRASEVFSSSPSFSSSFASSISRQEGGTPTSTTQGKSGTHKICLVCSDEASGC
HYGVLTCGSCKVFFKRAVEGQHNYLCAGRNDCIIDKIRRKNCPACRFRKCLMAGMNLEAR
KTKKLNRLKGNQNSSPPEMMPSPPVEARSLVPKCMPQLVPTMLSLLKAIEPDAIYAGYDG
TLPDTSTRLMTTLNRLGGRQVISAVKWAKALPGFRNLHLDDQMTLLQCSWLFLMSFSLGW
RSYQQCNGNMLCFAPDLVINEERMKLPYMAEQFEQMLKISSEFVRLQVSHEEYLCMKVLL
LLSTVPKDGLKSQAVFDEIRMSYIKELGKAIVKREENSSQNWQRFYQLTKLLDSMHEMGS
GLLSFCFYTFVNKFLSVEFPEMLAEIISNQLPKFKAGSVKPLLFHQK
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaggtggagtgaagaagatagcgtacagaagaaatgaccatctaagcaaactg
gtctacactgaaagccctgaggagggaggtcttctgaaggtggctcctcacagtgccatg
tccatcacctctcctccttctgttgttcttccatccagcccattaatgcagcctggacag
gtgaccaacggcctcagcaacagcccacttccagaggagcttgcctcagcccctgccacg
atcggttcctcggttgacagttcggaaaccaggggcctgaccaaagatcagaggcctgaa
gagctacagttgttccagacacagactttcaatacttttgggcatcaggtcctgccccag
ttggatgccagcatggcagacattacccagtcctccatggactccctcatcggggggtcg
gatcccaacctatttgctgtgaaaacggaggatttctccgtggataaaggcgagcaggac
cccaacgatctggaccatgcctttgaccacattggcaaagatgtggagatgaaccagaaa
ctgttcaacgaaaccagtctggatctccttcaagagtttgacctcaccgcatccccctcc
gatttttacgtaggggacgatgatgcctttttgtccacgctggcagaggattctttcctc
gcagtcggggaaatgagagggacgactgagagggacgtgaaaccctccgtggtcgagagc
gtcggcaccaccagagtctgtgacagcagcaaggcatcaagcccacttgaatccaagtcc
aagtctccgtctttgacccctacaaccacttttcccgccgtggtgaagaaagaaaaagat
accggcttcattcagctctgcacaccaggcgtgattaagaaggagaagacgtcttcgggg
tattgtcaaatgagcggctcaagccccatctctatctgtggggtgagcacttcggggggc
cagagcttccactttggaatcaacgccagaaacagcgacgctctgcaggagaaggaccag
aaacccgtgtctggcttgttcctcccagtaacgaccatcagtggagcctggaaccggaac
caggccgacagcgcagcgatccgcagggccagtgaggttttctcaagctctccctccttc
tcctccagctttgccagttccatctccagacaggaagggggcactccaacatccacgacc
cagggaaagagcggcactcataaaatctgtctggtgtgctctgatgaggcctccgggtgc
cattatggagtcctcacatgtggcagctgcaaggtcttcttcaagagagcagtggaaggc
cagcataattacctgtgtgctgggaggaacgactgcatcattgataaaatcaggcgaaag
aactgccccgcctgccgcttccgcaaatgcctgatggccggcatgaacctggaagctcgc
aaaacgaagaagttgaatcgcttaaagggcaaccagaacagcagcccgccagagatgatg
ccttcaccgccggtggaggctcgctcgctggtgcccaagtgcatgcctcagctcgtcccc
accatgctgtccctgctgaaggccatagagccggacgccatctacgccggctacgacggc
acgctccccgacacgtccacgcgcctcatgaccacgctgaacaggctgggcgggcgacag
gtcatctctgccgtgaagtgggccaaagctctgccaggtttcaggaacctgcacctggac
gatcagatgaccctgctgcagtgctcctggctcttcctcatgtctttcagcctgggctgg
aggtcttaccagcagtgcaacggcaacatgctctgcttcgcaccagacctcgtcatcaac
gaggagcggatgaagctgccctacatggccgagcagtttgagcagatgctgaagatttcc
agcgagttcgttcggctgcaggtttcccatgaggagtacctgtgcatgaaggtcctgctg
ctgctcagcacagtgcccaaggacggcctgaagagccaggcggtgttcgacgagatccgc
atgtcgtacatcaaagagctgggaaaagccatagtgaagcgcgaggagaactccagccag
aactggcagcgtttctaccagctcaccaagttgttggactccatgcacgagatgggcagc
ggactgctcagcttctgcttctacaccttcgtgaacaaattcctgagcgtggagttcccc
gagatgctggccgagatcatcagcaatcagctaccaaaattcaaggctggaagcgtcaaa
ccgctcctcttccaccagaagtga
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