Gambusia affinis (western mosquitofish): 122837381
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Entry
122837381 CDS
T07758
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122837381 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122837381 (atrx)
03036 Chromosome and associated proteins [BR:
gaf03036
]
122837381 (atrx)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
122837381 (atrx)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
122837381 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
122837381
NCBI-ProteinID:
XP_043983639
LinkDB
All DBs
Position
LG09:12044819..12081544
Genome browser
AA seq
2181 aa
AA seq
DB search
MNAIIFPPLVLDSNSGKMSLASSESNLDQMEQKGEEPGSSSESMKQSSSRSRRKPTNVTK
HTEQKESDALTSSENEGATSDSNTGSGSKGTLVMKPIGNESKGAMKLRVDFKQKKTDDTL
EKKVNCTACGKQVNQFQRNSVYEHPMLKVLICKSCFKYYTSDDIGRDSDGMDEQCRWCAE
GGKLICCDYCNNAFCKKCILRNLGRKELSSITDENSKWHCYVCRSEPLQDLVSNCHSIMQ
RKEEVEMKQRKTDKAEEREEKKKEKKKSSKEQKAIANGKEHSEGLGTMTFSYKNLQIPKD
LIKKTKKLVETTTGLNNTFIQFIQQATDDQADTTIRYRHLKAFKAVLSDLRKAHNALEEA
LKPEFRNMELQNGTEGQHARKTGNVVEPAENNEMDCSADSLPGEDREQYNEVKPICDTEE
MKETKQSPDENDLICKSDKTKKVSKDQDNIADLVCKAETGETVEELPNEIEVSTKESLKK
PSIETDPVDEAESMDEGVKELDNQQVMKSKDEVSNKPEMEDHQTETNIPKKIIKSEVFDS
EPVSTAETSLDHDIMSVPPSVPEELFQMVESLADSSMLSQSNTSSVKEVDTKSNEHPPET
QCPQPRVKNLIVKLTPVPVIKRSSSRSKDKEKDAEEPSKSKDKDDDKKDSDSSRAEEADS
PPPTRRSSRVKTTPLRKQGENKSKKDSSESESDGDAKAKPSKKSSNTKNETKSSEKTSED
SDSDEVPPALLEKAATGNSSTDEEQESTTAKKHLFKSDMSSKDTEKLTKRKRKSESSSSD
AESKDKKTSKKKKQAGSDNSYSDSDGESKNNRTSKKKKKKQASSDNSYSDSDGESKNNRT
SKKKKKKQASSDNSDSDSDGESKNKRTSKKKKQAGSDNSDSDSDVESKSKAVTARRRSSR
VKKQENSKGNEKDLSDKKQKRSYEKKRKGKSPKAASKLQSSSEEEEEEEETGGDSGEDSD
QQKIKPIVEDNVLGGSGVLNQSSGDEVDTKGDSQVFEDDDDDPENRIAKKMLLAQIKSSY
SSGAESSSDNEEEDTKKKTSKKAKKEKEDDEEEQDDEFTEDSESDVDVKKRGGRHKLLRH
KLSLSEGESGDSSKEKKSKGSKKKSSRKVGSDDSEDSDFEKSASGSASGMSEEVSDSEVD
SKRRKTRSAKKKEDENQRSYKQQKKKRRRIKVQDDSSSNNEKSGEEDDEDQDGEGRKGRK
KIRKILKDDNLRTETRDALKEEEERRKRIAEREALREKLREVVVVEEASQVACPITTKLV
LDEDEETKEPLVQVHKSLVTKLKPHQVDGVQFIWDCCCESVKKIQKSAGSGCILAHCMGL
GKTLQVVTFLHTLLLCEKLDFSTALVVCPLNTVLNWLNEFEKWQVGLKDEESLEVTELAT
VKRPQERAYALQQWQESGGVMIIGYEMYRNLTQGRNIKSKKLKEIFQKTLVDPGPDLVVC
DEGHILKNEASAVSKAMNSIRTRRRIVLTGTPLQNNLIEYHCMVNFIKENLLGSVKEFRN
RFINPIQNGQCADSTLHDVRIMKKRAHILYEMLAGCVQRKDYSALTKFLPPKYEYVLSIR
MTPLQCKLYRHYLEHFTGVGNALEGGRGRAGTKLFQDFQMLSRIWTHPWCLQLDYISKEN
RGYFDEDSMDEFIASETEESSMSLTSEDEKAKKKKKQGKGRKKGSDDSDSDEVEVIKEWN
SSSRGRNGEGRSQPEPVEEPRAANSTPGSPCSADWYKEFVTEADSEILEHSGKMMLLFEI
LRMAEEVEDKVLVFSQSLISLDLIEDFLELSCRTDEDAKLSPYKGEGKWFRNIDYYRLDG
STNAPTRKKWAEDFNDTSNTRGRLFLISTRAGSLGINLVAANRVIIFDASWNPSYDIQSI
FRVYRFGQVKPVYVYRFLAQGTMEEKIYERQVTKQSLSYRVVDQQQIERHFTMNELAELY
TFEPDMLDDPSEKKSKRATPMLPKDLFLAEMLQNSKDQLVCYHEHDSLLDHKEEEALSEE
DRKAAWAEYEAEKKGLSMRTNYASNYAQPDMGTSNYFSFNMAALATMTNQQLEDLINQGR
QKVIEATNALKALARESMEDIIARIWKDNPTLTESQVQALSLRHQATVEMELKRREGIYR
EVLNRQQTLMVYVQKLITNRKVQEQQLAMANQATYLNQLALQNGMMAGGMSQMNLLGLYQ
RLHGMGGNQGGGKNPGPSQGM
NT seq
6546 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccatcattttcccccctcttgtcttggacagcaactcaggtaaaatgagtctg
gcttcttctgaatcaaacctagatcaaatggaacagaaaggagaggagcctgggagctca
tcagaaagcatgaaacagtcttcttctcgaagcaggaggaagcccaccaatgtaacaaag
cacacagaacagaaagaatctgacgccttgactagtagcgaaaacgaaggtgccacttct
gacagtaacacaggtagcggatctaaaggcacgttagtgatgaaaccgattgggaatgaa
agcaaaggtgccatgaagctcagagtggatttcaaacagaaaaaaacagatgatactctg
gagaagaaggtcaactgcacagcctgcggaaaacaagtaaaccagtttcagcgtaactct
gtgtacgagcatcctatgctcaaagtactcatttgcaagtcatgtttcaagtactacaca
agcgatgacatcggccgggattctgatgggatggatgagcaatgcagatggtgtgctgag
ggtgggaagctaatctgctgtgactactgcaacaacgctttctgcaaaaagtgcattctg
cgcaacctgggcaggaaggaactgtccagcatcacggatgagaactccaagtggcactgc
tacgtgtgccggtccgagcccctccaggatctggtctctaactgccacagcatcatgcag
aggaaagaagaagtggaaatgaagcaacgaaaaactgataaagctgaggagcgtgaagag
aaaaagaaagagaagaagaaatcctccaaggaacagaaagcaattgcaaatggaaaagaa
cacagtgaaggcttggggaccatgactttctcctataaaaatttgcagatacccaaagat
ctaatcaagaagacaaagaagcttgttgaaactacaaccgggttaaataacactttcatt
cagttcatccagcaggcgaccgacgaccaggcagacactaccatcaggtatcgacatttg
aaagccttcaaggctgtgctctcagatctgaggaaagcccacaatgccttggaggaggct
ttgaagcccgagttcagaaacatggagctgcagaatggtactgaagggcaacatgcgaga
aagactggcaatgttgtggaacctgcagaaaacaatgagatggattgttctgcagattca
cttcctggtgaggacagagagcagtataatgaagtcaagccaatttgtgacacagaagaa
atgaaggagactaagcagtcacctgatgagaatgatttaatttgtaaatctgacaaaacc
aaaaaggtgtcaaaggaccaggataatatagcagatttagtttgtaaagctgaaacgggg
gagacggttgaagagctgcctaatgaaatagaggtttcaacaaaagagtcgctcaaaaag
ccgtctattgaaacagatccagttgatgaagcagaatcgatggacgaaggggtgaaagag
ttggataaccagcaggtcatgaagtcaaaagacgaagtgtccaataagcctgaaatggaa
gaccaccaaacagaaacaaacatccccaaaaagataattaaaagcgaggtctttgacagt
gagccagtgtcgactgctgaaacatccctagatcacgacattatgtctgttcctccttca
gtccctgaggagcttttccagatggtggagagcctcgctgattcctccatgctctcacag
tccaataccagttcagtgaaagaggtggatacgaagtcaaatgaacatcctccagaaacc
caatgcccccaacccagagttaagaacctgatagtcaaactgactcctgtaccagttatc
aaaaggagcagttctaggtcaaaggacaaagaaaaggatgcagaagaaccgagcaagagt
aaggacaaagatgatgataagaaagactctgattctagtcgagcagaagaagccgacagc
ccaccaccaacccgccgctccagtagggtgaagaccactcctttaaggaagcaaggagaa
aataaaagcaagaaggactcctctgagtcagaatctgatggcgacgccaaggccaagcca
tcaaagaaatccagtaacactaaaaacgagaccaaaagttcagagaaaacatcagaggac
tctgactcagacgaagttcctcctgctctactggagaaagctgcaacaggcaacagcagc
acagacgaggaacaggaaagcacaacggcgaaaaagcatctcttcaaatcagacatgtcc
tcaaaggacacagagaagctaaccaaacgcaaacgcaagtccgaaagctcaagttcagat
gcagagagtaaagacaagaagacgtccaagaaaaagaagcaagccggttcggacaactcg
tactctgattcagatggagagagtaaaaacaacaggacatccaagaagaagaagaagaag
caagccagttcggacaactcgtactctgattcagatggagagagtaaaaacaacaggaca
tccaagaagaagaagaagaagcaagccagttcggacaactcggactcggattcagatgga
gagagtaaaaacaagaggacatccaagaagaagaaacaagccggctcggacaactcagac
tccgactcagatgtggagagtaagagcaaagcagtcacagctagaaggaggtctagccgc
gtcaagaaacaggagaactccaagggcaatgaaaaagacttgtctgacaagaagcagaag
cgatcttatgaaaagaagcggaagggaaagagcccaaaagctgcctccaagctacagtct
tcatccgaggaagaagaggaagaagaggagactggaggcgactccggagaggatagtgac
cagcaaaagatcaagcccattgtggaggataatgtacttggaggcagtggagtcttgaat
cagtcctcaggagacgaggtagacactaaaggtgattctcaagtttttgaagacgacgac
gacgaccccgaaaacaggattgcaaagaaaatgcttcttgcgcaaataaagtccagttac
tcttcaggagcagaaagctcctctgacaatgaagaggaagacacgaaaaagaaaacctcc
aagaaagctaaaaaagaaaaagaggatgacgaagaggagcaagatgatgaatttacagaa
gactccgagtctgacgttgatgtgaagaagcgcggcggtcggcacaaattgctccgtcat
aagctgtccttgagtgagggtgaatctggagactcgagcaaggagaagaagagcaagggc
agcaagaaaaagtcttcacgtaaagttggcagcgacgactctgaagactcagactttgag
aagtcagcgtctggttctgcctcggggatgagcgaggaggtcagtgactcagaggtggac
agcaagcgtcgaaagaccagatcagcaaagaagaaagaagatgagaatcagaggagctac
aagcagcagaaaaagaagcgacgtagaatcaaagttcaggacgactcctcaagcaataat
gagaagagcggagaggaagatgatgaggatcaagatggagaggggcgcaaaggccggaaa
aagatccgcaaaatcctcaaggacgacaacttgaggacggagacgagagatgctctgaag
gaggaagaggagaggaggaaacgtatcgctgagagggaggcgctcagggagaaactcaga
gaggtggttgtagtagaagaagcctcccaggtggcctgccccatcaccaccaagctggtc
ctggatgaagacgaagaaaccaaggagccgctggtccaggtgcacaagagcctcgtcaca
aagctcaagcctcatcaggtggacggtgttcagtttatctgggactgttgctgcgagtct
gtgaaaaagattcagaagtctgcaggctctggctgcatcctggctcattgcatgggtcta
ggaaaaactctacaagtggtgacattcctccacaccctgctgctttgtgaaaagctcgac
ttcagcacagctttagtggtttgtcccctcaacactgttcttaactggctcaatgagttt
gagaaatggcaggtgggactgaaggatgaggagagcctcgaggtaacagagctagccaca
gttaagaggcctcaggagcgagcctatgctctccagcagtggcaggagtcgggcggcgtt
atgatcataggttatgagatgtacagaaatctgacgcagggacgaaacatcaagagcaag
aagctaaaagagatatttcagaaaacgcttgtggatccaggtccagacttggtggtctgc
gatgaaggccacattttgaagaatgaggcttccgccgtctccaaagcaatgaactccatc
aggacgaggaggaggattgtcctgactggaacccctctgcaaaacaacctcattgaatac
cactgcatggtgaactttatcaaggaaaacttgctcgggtcggtcaaggagttcagaaac
cgcttcattaaccccattcagaatggccagtgtgccgactcgacgctgcatgacgtccgg
attatgaagaagagggcgcacatcctctacgagatgctggccggctgcgttcagagaaaa
gattactcagcgctcaccaagttcctgcctcccaaatacgagtatgtgctgtcgatcaga
atgaccccgctccagtgcaaactctacagacattacctggagcacttcacaggtgtgggg
aatgctctggaagggggccggggccgagcgggaaccaaactcttccaggatttccagatg
ctcagcaggatctggacccatccctggtgccttcagctggactacatcagtaaagaaaac
aggggctacttcgatgaagacagtatggatgaattcatcgcttcagaaactgaggaatcc
tccatgagtctgacctcagaggatgagaaggcgaaaaagaaaaagaagcagggaaaaggg
aggaagaagggctctgacgactcggacagtgacgaggtggaggtcatcaaggagtggaac
agcagctctcgtggcaggaacggagaaggtcgaagtcaacctgagcctgttgaagaaccc
cgggcagccaactctacgccagggagtccctgctctgccgactggtacaaggagtttgtg
acagaagctgactctgaaatcctggagcactcaggaaagatgatgctgctctttgagatc
ctgcgcatggctgaggaagtagaagataaagtgttggtgttcagtcagtcgctcatctct
ctggacctgatagaagattttctagaactttcctgcagaacagatgaggacgcaaaactt
tctccttacaaaggtgaaggaaaatggttcaggaacatcgactattaccgcctcgatggc
tccaccaacgcccccaccaggaagaagtgggccgaggactttaatgacaccagtaacaca
agggggcgtttgttccttatatccacccgagccggttctctcggcatcaacctggtggcc
gccaaccgggtcatcatttttgatgcctcctggaatccctcgtacgacatccagagtatc
ttcagggtgtatcgctttggccaggtcaaacccgtctacgtctacaggtttcttgcgcag
ggcacaatggaggagaagatttatgagcggcaagtgaccaagcagtctctgtcgtaccga
gttgtggatcagcagcagatcgagagacacttcacgatgaacgagctggctgagctctac
acctttgagccggacatgctggatgatccttcagagaagaagagcaagagagcaactccg
atgcttccaaaggatctgttcctcgccgagatgctgcagaacagcaaggaccagctcgtg
tgttaccacgaacatgactccctgctggaccacaaggaggaggaagccctcagcgaggag
gaccgcaaggcggcttgggccgagtacgaagcagagaagaagggcctgtcgatgaggacc
aactacgcttcgaactacgctcagccagacatgggcacatctaactacttctccttcaat
atggcagctttggccaccatgaccaaccagcagctggaggacctcataaaccagggacgg
cagaaagtcattgaagcaacaaacgctttgaaagccttagctcgggagtcgatggaagac
atcattgccagaatatggaaggacaacccaacgctcacagagagccaggtccaggcgctc
tcgctgaggcaccaagccactgtggagatggagctcaagcgcagggaaggcatttacaga
gaggtcctcaacaggcagcaaacgctgatggtgtatgttcagaagctgatcaccaacagg
aaggtgcaggagcagcagctggccatggccaaccaggccacttacctgaaccagctggcc
ctgcagaacggcatgatggcaggcgggatgagccaaatgaacctgctcgggctttaccag
cgcctccacggcatgggcggcaatcaaggcggcggcaagaacccgggcccctcacagggc
atgtag
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integrated database retrieval system
