Gambusia affinis (western mosquitofish): 122837388
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Entry
122837388 CDS
T07758
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122837388 (rlim)
Enzymes [BR:
gaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122837388 (rlim)
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122837388 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
122837388
NCBI-ProteinID:
XP_043983650
LinkDB
All DBs
Position
LG09:12286452..12295030
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AA seq
660 aa
AA seq
DB search
MEGSDSVEQGGGDQPESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGNPGEVT
EDELFNRLQQIKDGPEQPQNNNTSTENTEEPVETPESSEDSQGGDSLLDWLNTVRRTGNT
TRTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQGSSEQPPAGQEEE
EVADPEPQVPMETEVVEEPVVEELAVIVEPEPEETPEEEVASQEAIEEPPSPPPAPPPAP
VVAEVSPEQPPPCSSPRRGQRRPRSRSPEPRRTRARLARSRSPLRLDQLDGLPGPRHTYG
SQSPSSSTDTPPVPQVEGSSRTRQHILSRQSPADDNVHPPSVEAESIPEAQNVRPQEGEP
NGNEGGSAERRPPTIMLDLQVRRVRPGEYRQRDSIASRTRSRSQNSNNTFLYESERGGFR
RTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSMALQSMIRQIMTGFGELGYLMDSDS
DSSDSNRGTGTPADTESLTNPDASNADASAADEQPSVAAAAAGVRERTVETDVDEGLTTG
PQASGGRARPRPPISLEEPSSLPFLRLAHFFLLNDDDDDQPQGLTKEQIDNLSMRNFGES
DALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLVSANRESVI
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgacagcgtagagcaaggtggcggtgaccagccagagtcgcagcgccgg
agacagttggatcgtcttgaccgggaagaggccttttatcaatttgtcaacaatctcagt
gatgaggactatcgtcttatgagagacaacaacctcttgggcaatccaggggaggtaact
gaggatgagttgttcaatagacttcaacaaatcaaagatggtccagagcagccgcagaat
aacaacacaagcacagaaaatacagaggaacccgttgaaactccagagagctctgaggac
tcccaaggtggggatagcttgctagactggctcaacacagtgagacgaaccggcaacaca
actagaactggacaccgcggaaaccagtcttggcgagctgtgagccagaccaaccctaac
agtggtgactttcgctttagcttggagatcagtgtgaaccgcaacctggccgaacagcag
gctgctgctgaaggagaacaggggtcttcagagcagcccccagcgggccaagaggaggaa
gaggttgcagatcctgaaccacaggttcctatggaaacagaggttgtagaagaaccagtc
gttgaagagttagctgtcattgttgagccagaacctgaagaaacacctgaagaagaggtt
gcctcacaagaagctatcgaggaacctcccagtccacccccagctccacctccagctcca
gttgtagcagaagtttcaccagagcagcccccaccttgttcttctccacgaaggggacaa
aggagaccccgcagccgcagcccagaaccacgcaggaccagagcccgcttagccagaagc
cgctcacctctccgtttggatcagctggatggcctacccggtccgcgacacacctatggc
tctcagagccccagttcttccactgacacacctccagtgcctcaagtggagggcagttct
cggactcgacaacatattctctccaggcaaagcccagcagacgacaatgttcatccaccc
agtgtcgaagcagaatcaatcccggaggcccagaatgtcagacctcaggaaggagaaccc
aacgggaatgaaggaggctcggcggagcgccgtcctccgactataatgctcgaccttcag
gtgcgacgtgtacgtccaggcgaatatcggcaaagagacagcatcgccagccgtacgcgg
tcacgctcgcagaactccaacaacacttttctctatgagagtgagcgagggggttttcgc
aggaccttctcgcgctccgagcgtgctggagtgaggacctacgtcagcaccattcgaatt
cccattcgcaggatctccgatgcagggttaggagaggcgacgtcgatggctctccaatct
atgattaggcagattatgacgggcttcggcgagttaggctacctcatggactccgactca
gattcttcagattcaaaccgcggtaccgggacacccgcagatacggaatccctcaccaat
ccagatgctagtaatgctgacgcatctgctgctgatgagcaaccatcggttgctgctgct
gctgctggagtcagagagaggacagttgagacagatgtggatgagggtcttactactggc
ccacaggcttctggtggaagggctcgacctagaccccccatcagcctagaggagcccagc
tcgctgcccttcctacgacttgctcacttcttcctcctgaatgacgacgacgatgaccag
ccccaggggctgaccaaagaacagattgataacctctccatgcgcaactttggtgagagc
gacgccttgaaaacctgtagcgtctgtataacggagtacgccgaggggaacaagttacgc
aagcttccctgctctcatgagtaccacgtgcactgcatagaccgctggctgtctgagaac
tccacctgccccatctgtcgcagggctgtcctggtttcagccaaccgagagagcgtgatc
taa
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