Gambusia affinis (western mosquitofish): 122837487
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Entry
122837487 CDS
T07758
Symbol
scn8aa
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit a isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122837487 (scn8aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122837487 (scn8aa)
Ion channels [BR:
gaf04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
122837487 (scn8aa)
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GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
HpsJ
GPHH
Motif
Other DBs
NCBI-GeneID:
122837487
NCBI-ProteinID:
XP_043983787
LinkDB
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Position
LG01:24189105..24244443
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AA seq
1955 aa
AA seq
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MAAPLLAPPGPDSFKKFTRESLVVLEERLKEEKNKKPPKQDSSYRDDDDENKPKPNSDLE
AGRSLPYIYGDIPKGMVAIPLEDLDPFYLNTQKTFIVLNRGKTIFRFSATPALYFISPFN
LVRRIAIKILIHSLFSMIIMCTILTNCIFMTFSDPPEWSKQVEYTFTGIYTFESLVKITA
RGFCIDNFTFLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKT
IVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVIWPINLNETYLNNGSKG
FDWNEYINNDTNFYFLPGQLDALLCGNSSDSGRCPEGYMCMKAGRNPNYGYTSFDSFGWA
FLALFRLMTQDFWENLYMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQ
ATMEEAAQKEEEFKAMLEQLKKQQEEQTAPPATSAGTVSEDAVEDDGGGRLSVSSSEMSK
LSSKSAKERRNRKKKWRQKEQEKEKGDSEKFVKSESDDGSKRSRFRFPDNRLGRKSSIMN
QSLLSIPGSPFLSRHNSKSSIFSFKGRSKDMGSETEFADDEHSTVEECEERRGSIFSPYR
RSSYTGFHGKRNSTVDCNGVVSLIGPGPGGRLLPEPTTEVEVKKKLSGSLMVSVDQLNTS
FGRKERANSVMSVITNTLAEELEESQRKCPPCWYKFSNTFLIWECSPMWIKIKEIVNLIV
MDPFVDLAITICIVLNTLFMAMEHYPMTPDFEDMLSVGNLVFTGIFAGEMLFKLVAMDPY
YYFQEAWNCFDGFIVTLSLVELALADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN
SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIAADCELPRWHMNDFFHSFLIVF
RVLCGEWIETMWDCMEVAGQGMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDD
DGEPNNLQISVMRIKKGIAWIKAKVRILVASLLRKPPMEDEQKPLEDMCDTKVNYIGNHT
GVDIKRDLDYAKNGNGTTSGIGSSVGKYMIDEDHMSFIHNPNLTVCVPIAVGESDFENLN
TEDFSSESDIENSKELDDTSSSEGSTIDIKPDVEEVVVVETVEEYLEPESCWTDACVAKY
KCCEVDITMGWGKNWWFLRKTCYLIVEHNWFETLIIFMILLSSGALAFEDVYIEQRKTIR
IILEYADRVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVSIVSLVANALGYSDL
GPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLF
AGKYYYCFNQTSEEYFDVEVVNNKTQCEALIRDNHTEVRWKNVKINFDNVGAGYLALLQV
ATFKGWMDIMYAAVDSRNVEDQPKYEVNIYMYIYFVVFIIFGSFFTLNLFIGVIIDNFNQ
QKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGYVFDFVTQQVFDISIM
ILICLNMVTMMVETDDQSEQTEMVLYWVNFIFIVVFTTEFLLKLFALRHYYFTNGWNIFD
VVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLP
ALFNIGLLLFLVMFIFSIFGMSNFGYVKHGAGIDDLYNFETFGNSMIILFMITTSAGWDG
LLLPILNYPPDCDPNLENPGTSVKGDCGNPSVGIFFFVMYIIISFLIVVNMYIAIILENF
SVATEESADPLSEDDFETFYEIWEKFDPTASQFISFAKLPDFADALEHPLRVPKPNTIEL
IAMDLPMVSGDRIHCLDILFAFTKRVLGDSGELDMLRTQMEERFVAANPSKVSYEPITTT
LRRKQEDVSARIIQNAYRAHLIRRGIIFKRHILSSNKLENGGTNQEKKESTPSTASLPSY
DSVTKPDKEKQDKSKEDWARKEKDKNQKDEWESKC
NT seq
5868 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccccttcttgcaccgccaggacctgatagcttcaagaagttcacgagggaa
tctttggtggtccttgaggagcgcctcaaagaggagaagaacaagaagccacccaagcag
gacagcagctaccgtgacgacgatgacgagaataaacccaaacccaacagcgacctggag
gccgggaggagcctgccctacatctatggggacatcccgaaaggaatggtggcgatacca
ctggaggatttggatccgttctacctgaacactcaaaaaacatttatagtgttaaataga
gggaagacaatcttccgttttagtgccacacctgccttgtacttcataagtcctttcaat
ctggttaggcgaatagctattaaaattttgatacattctcttttcagcatgatcattatg
tgtactattttgaccaactgtatattcatgacctttagtgatccccctgagtggtcaaaa
caagtagagtacacattcacaggaatttatacatttgagtctcttgtaaaaatcaccgca
cgtggattctgtatagataattttacgttcctaagagatccatggaattggctggatttc
atggtcatttcgatggcatatgtaacagagtttgtggacctgggcaatgtatctgcgctg
agaacgttcagagttctccgagcattgaaaactatctctgtcattccaggcctgaagacc
attgtgggagctctgatccagtctgtgaagaagctttcagatgtgatgatcctcaccgtc
ttctgtctgagcgtgttcgccctgatcggccttcagctcttcatggggaacctgcggcag
aagtgcgtcatctggccaatcaacctcaatgagacttacctgaacaacggcagcaagggc
tttgactggaacgagtacatcaacaacgacaccaatttctacttcctgcctggtcaactg
gacgctctgctctgtgggaacagctccgactctggccgctgcccagagggctacatgtgc
atgaaagctgggaggaatccaaactacggctacaccagctttgacagcttcggctgggcc
ttcctggctctcttccgactcatgacgcaggacttctgggagaacctgtacatgctgacc
ttgagggctgcgggaaagacatacatgatcttcttcgtcttggtgatctttgtgggctcg
ttctacttggtgaatctgattctggctgtggtagccatggcttacgaggagcagaaccag
gccaccatggaggaggccgcgcagaaggaggaggagtttaaggccatgctggagcagctc
aagaaacagcaggaggagcagactgcgccccctgcaacctctgctggcacggtgtcggag
gatgcggtggaggacgacggaggaggccgtctgtctgtcagctcctcggagatgtcgaag
ctcagctccaagagtgccaaagagcgccgcaaccgcaaaaagaagtggcggcagaaggag
caggagaaggagaaaggcgacagcgagaagtttgtgaagtcagagtcggacgacggcagc
aagaggagccgcttccgtttccctgataaccgcttgggtcgaaagtcttccattatgaac
cagtccctcctgagcattcccggttcgcctttcctctcccgtcacaacagcaaaagcagc
atcttcagcttcaagggccgcagcaaggacatgggctccgagaccgaatttgccgacgac
gagcacagcacggtggaggagtgcgaggagcgccgcggctccatcttcagcccctaccgg
cggagcagctacaccggtttccacgggaagaggaacagcacggtggattgcaacggagtg
gtgtcgctcatcggcccagggcccggtggacgccttctgcctgagccgactactgaggtt
gaggtgaagaagaagctgtcgggctccctgatggtgtctgtggaccagctcaatacctcc
tttgggcggaaagagcgggccaacagtgtcatgagcgtcattaccaacacattagcggag
gaactggaggagtctcagcgcaagtgtccgccatgctggtataagttttctaatacattc
ctgatctgggaatgctccccaatgtggattaagatcaaggagattgtaaacttgatagtc
atggatcccttcgtggacctggccatcactatctgtatcgtcctcaacaccctcttcatg
gccatggagcactaccccatgacgcccgactttgaggacatgctgtctgtaggcaatctg
gtgttcacagggatctttgcaggggagatgcttttcaagcttgtggctatggatccgtac
tactatttccaggaggcctggaactgttttgatggattcattgtgaccctgagtttagtg
gagctggctctggctgatgttgaaggcctttctgtgctgcggtcattccgattgctgaga
gtgtttaagttggccaagtcctggccaactctcaacatgctgatcaagatcattggtaac
tcggtgggagccttgggaaacctgactctggtgctggccatcatcgtcttcatttttgct
gtggtgggcatgcagctgtttggaaagagctacaaagactgtgtgtgcaagattgctgct
gactgcgagctgcctcgctggcacatgaacgacttcttccactcgttcctgatcgtcttc
cgggtgctctgtggagagtggatcgagaccatgtgggactgcatggaggtagcggggcag
ggaatgtgcctcatcgtgtttatgatggtcatggtcatcggtaacctggtggtgttgaat
ctgttccttgccttgctgctgagctcgttcagcgcagacaacttggctgcgacagatgac
gacggcgagcctaacaacctccagatctcggtcatgcgcattaaaaagggcattgcctgg
ataaaagccaaggtgcgcatactggtggcgagcctgctgcggaaacctcccatggaggac
gagcagaagcctctggaggacatgtgtgacaccaaggtgaactacattggcaatcacacc
ggggtcgacatcaaacgtgacctggattacgccaagaatggaaatgggaccaccagtggg
atcggcagcagcgtgggcaagtacatgattgatgaggaccacatgtcgttcatccacaac
cccaatctaacagtctgcgtgcccattgctgttggagagtctgactttgagaacctcaac
acagaggatttcagcagcgagtcagacattgagaacagcaaagagctggatgacaccagc
tcgtcagagggcagcaccatcgacatcaagccagacgtagaggaggtggtggtggtggag
acggtggaggaatacttggaaccagagtcatgctggacagacgcctgcgtggccaaatat
aaatgctgcgaagttgacatcaccatgggctgggggaagaactggtggttcctgaggaaa
acctgctacctgatcgtggagcacaactggttcgagaccctcatcatcttcatgatcctc
ctcagtagtggtgctctggcctttgaggatgtgtacattgagcagaggaagaccattcgc
atcattttggagtacgccgacagggttttcacctacatcttcatcctggagatgttgctg
aagtgggttgcctatggctttgtcaagtatttcaccaatgcttggtgctggctggacttc
ttcattgtggatgtgtctatagtcagccttgtagctaatgcgctgggctactccgatcta
gggcccattaaatcactcaggacactaagggccttgagacccctcagagccttgtcacgt
tttgaagggatgagggtggtagtcaacgccttggtgggtgccatcccttccattatgaat
gtgttgctggtttgcctcatcttttggctgattttcagtatcatgggggtcaacttgttt
gcgggcaagtactactactgtttcaatcagacgtcagaggaatattttgatgtcgaagtt
gtcaacaacaagacccagtgtgaggcgcttattagagataaccatactgaggtcaggtgg
aagaacgtcaagatcaactttgacaatgtgggcgctggctacctcgccttgttgcaagtg
gccacattcaaaggttggatggacataatgtacgctgcagtggattccagaaatgtggaa
gaccagcccaaatatgaagtcaacatttacatgtacatctactttgttgtcttcatcatt
ttcgggtccttcttcaccctgaacctcttcattggtgtgatcattgacaacttcaaccag
cagaagaaaaagtttggaggtcaggatatcttcatgacggaggagcagaagaagtactac
aacgccatgaaaaagttgggctccaaaaagccgcagaagcccatccctcgaccacagaac
aagatccagggatacgtgtttgactttgtgacgcagcaggtctttgacatctctatcatg
atactgatctgcctcaacatggtcactatgatggtggaaacagacgatcagtcagagcaa
acagaaatggttctctactgggtcaacttcatcttcatcgtggtgttcaccacagagttc
ttgctgaagcttttcgcgctacgccattattacttcaccaacggatggaatatcttcgat
gtggtggttgtcatcctctctatcgtcggtatgttcctggctgacatcattgagaagtac
tttgtgtcaccgaccttgttcagggtcatcaggttggctcgtattggccggatcctgcgt
ctgatcaaaggagctaaaggcatccggactttgctcttcgccctgatgatgtccttgccg
gccttgttcaacatcggcctgctgctcttcctggtcatgttcatcttctccatctttggc
atgtccaacttcggctatgtaaagcacggagcgggtatcgacgacctgtacaacttcgaa
accttcggcaacagcatgatcatcctgtttatgatcaccacgtcggccggctgggacggc
ttgctgctgccaattctgaactacccgccggactgcgaccccaacttggagaaccctggc
acttcggtgaagggcgactgtgggaatccctcagtggggattttcttttttgtcatgtac
attattatttctttcctgatcgtggttaacatgtacattgccatcattctggagaacttc
agcgtggccactgaggaaagtgccgatccgctcagtgaggacgactttgagaccttctac
gagatctgggagaaatttgatcccactgcctcccagttcattagtttcgccaagctgcct
gactttgccgacgctttggagcacccgcttcgtgtgccgaagcccaacactatagaactg
atcgccatggacctgcctatggtgagtggcgatcgcattcactgcctcgacatcctgttt
gcctttacgaagcgtgtgctgggcgacagtggcgagctggacatgctgcggacgcagatg
gaggagcgcttcgtggccgccaacccgtccaaggtgtcgtacgagcccatcaccacgacg
ctgcgccgtaagcaggaggacgtatctgccagaatcatccagaacgcctaccgcgcccat
ctcatcaggcgcggcatcatcttcaagcggcacattttatctagtaacaagcttgagaac
ggcgggaccaatcaggagaagaaggagagcacgccatccacggcctcgctcccgtcctac
gacagtgtgaccaaacctgacaaagagaagcaggacaaaagcaaggaggactgggccagg
aaagagaaggacaaaaaccagaaagatgagtgggaatccaaatgttag
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integrated database retrieval system
