KEGG   Gambusia affinis (western mosquitofish): 122837491
Entry
122837491         CDS       T07758                                 
Symbol
cul4b
Name
(RefSeq) cullin-4B isoform X1
  KO
K10609  cullin 4
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf03420  Nucleotide excision repair
gaf04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    122837491 (cul4b)
  09124 Replication and repair
   03420 Nucleotide excision repair
    122837491 (cul4b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gaf04121]
    122837491 (cul4b)
   03400 DNA repair and recombination proteins [BR:gaf03400]
    122837491 (cul4b)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gaf04147]
    122837491 (cul4b)
Ubiquitin system [BR:gaf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     122837491 (cul4b)
DNA repair and recombination proteins [BR:gaf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      122837491 (cul4b)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      122837491 (cul4b)
Exosome [BR:gaf04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   122837491 (cul4b)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 122837491
NCBI-ProteinID: XP_043983794
LinkDB
Position
LG09:complement(21866291..21885508)
AA seq 872 aa
MFPTGLSSPNPPPPPTQEARPAATDVKSDSGNITSPKKRKINGSERDDTSDTISSSPPKT
LNSSSSSSSSCSPTPPLHIQKKLRFEDSVDFIGLDVKMAEEAAAAAAAASCSNNKSKAMF
LAGGVGGHHANGLTKTAGSGTFSSSKPGAAKKLVIKNFREKPKLPENYTQETWQKLKEAV
EAIQNSTSIKYNLEELYQAVENLCSHKISAKLYKQLRTVCEDHIKAQIDQFREDALDSVL
FLKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQS
KTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRL
MQEREVIYVPEYLHHVNKRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTAILQKGL
THLLDENRIQDLSLLYQLFSRVRGGVQVLLQQWIEYIKAFGSTIVINPEKDKTMVQELLD
FKDKVDHIIDVCFLKNEKFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDE
ELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAF
TSKLEGMFKDMELSKDIMVQFKQYMQCQNIPGNIELTVNILTMGYWPTYVPMEVHLPPEM
VRLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEE
FTLEEIKVATGIEDSELRRTLQSLACGKARVLTKIPKSKDVEDGDKFSCNDDFKHKLFRI
KINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNLLMSEVYNQLKFPV
KPADLKKRIESLIDRDYMERDKENSNQYNYVA
NT seq 2619 nt   +upstreamnt  +downstreamnt
atgtttccaacaggtttatcttcccctaatcccccaccaccgccaacccaggaggctaga
cccgcggctactgatgtcaaaagcgacagtgggaacatcacatctccgaaaaagaggaaa
ataaacggctcagagagggacgacacgagtgacaccatctcctcctcgcctcccaagacc
ctcaattcctcctcctcctcctcttcctcctgctctcccactcctccgctgcacattcag
aagaagttgaggttcgaggattcggtggatttcattggactagatgtgaaaatggctgag
gaggctgctgctgccgccgctgctgcttcgtgctccaataacaaaagcaaagccatgttc
ctggccggtggcgtggggggacaccacgcgaacggactgacgaaaaccgcagggtccggc
accttctccagcagcaaacccggtgctgccaagaaactagtcatcaagaacttcagagaa
aaacccaagttaccagaaaactacacgcaggagacctggcagaagctgaaagaagctgtg
gaggccattcagaacagcacttccatcaagtacaatctagaagagctctaccaggctgtt
gaaaacctctgctcccataagatatctgccaaactgtacaaacagctgaggaccgtgtgt
gaagaccacatcaaggcacagatcgatcagttcagagaggatgccctggacagcgtcctt
ttcctgaagaaaatcgataagtgctggcaagatcactgcagacaaatgatcatgattagg
agtatatttctgtttttggatcgcacctatgttttacaaaattctatgctgccatcgatc
tgggacatgggcctggagctgttcaggttctacatcatcagcgacctgaaggtccagagt
aaaaccatcgacgggattctgctgcttatcgagagggaacgaaacggagaagccatcgac
cgcagtctgttgaggagcctactgagcatgctctctgacctccagatttatcaagactcg
tttgaacagcgctttttggaggaaactaatcgactttacgccgcagagggacagaggctg
atgcaggagcgagaggtgatttatgtgccagaatatctccatcatgtcaacaaacgcctg
gaggaagaagctgacagagtaatcacatatctggaccagagcacacagaaaccgctcatc
gctactgtggagaagcagctgctgggcgaacatctcactgcgattctgcagaaaggtctg
acccacctgctggacgagaacaggattcaggatctgtctctgctgtatcagctcttcagt
cgagtccgaggcggcgtccaggtgctgctgcagcagtggatagaatacatcaaggcgttt
ggaagcacaatcgtaatcaaccctgaaaaagacaaaacgatggttcaggagctgctggac
ttcaaggacaaggtggatcacatcatcgacgtttgtttcttgaagaacgagaagttcgtc
aacgccatgaaggaggctttcgaaaccttcatcaacaagcggccaaataagcctgcagag
ctcatcgccaaacacgtggattcgaagctgcgggccggaaacaaagaggcgactgatgaa
gaactggagaagatgctggataagatcatgattatctttagatttatatatggaaaagac
gtatttgaggctttttacaaaaaggacctggccaagaggttgctggttggaaaaagtgcc
tcagtggacgctgaaaaatcaatgttgtcgaagctgaaacatgaatgtggagcggcgttc
accagcaaactagagggaatgttcaaagacatggagctttctaaagacattatggtgcag
ttcaaacagtacatgcagtgccaaaacattcccggcaacattgagctgaccgtcaacatc
ctcaccatgggttactggccgacctacgtccccatggaggtccatctgcctcctgagatg
gtgcgcctgcaggagatcttcaagacgttttacctgggcaaacacagcggcaggaagctg
cagtggcagtcgacgttaggtcactgcgtcttaaaagcagaatttaaagagggcaagaag
gagctgcaggtgtctcttttccaaacgctggtgctgctgatgtttaacgaaggagaggag
ttcactctcgaagaaatcaaagtagctacaggaatagaggacagcgagctgcgtcggacg
ttgcagtcgctagcgtgcggaaaagcacgagtcctcaccaaaatcccgaaaagcaaagac
gtggaggacggagacaagttttcctgcaacgatgacttcaaacacaaactcttcaggatc
aaaataaaccagattcagatgaaagagacggtggaggaacaagccagcaccacagaacgg
gtgtttcaggatcgccagtaccagatcgatgcggccattgtgcggataatgaagatgagg
aagactctgagccataatcttttgatgtctgaggtttacaaccagctcaaatttcctgtc
aagcctgctgacctaaagaagaggatagagtctcttattgaccgggactatatggagcgc
gacaaggaaaactccaaccagtacaactatgtggcctag

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