Gambusia affinis (western mosquitofish): 122837638
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Entry
122837638 CDS
T07758
Symbol
frmpd1b
Name
(RefSeq) FERM and PDZ domain-containing protein 1 isoform X1
KO
K23954
FERM and PDZ domain-containing protein 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
122837638 (frmpd1b)
Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
Other domain-containing proteins
FERM domain-containing proteins
122837638 (frmpd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FERM_M
RA_2
PDZ
PDZ_6
FERM_C_FAK1
FERM_f0
PDZ_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
122837638
NCBI-ProteinID:
XP_043984061
LinkDB
All DBs
Position
LG09:13740041..13770368
Genome browser
AA seq
1704 aa
AA seq
DB search
MEENERCRSRSPARRTNRVQQVVGTIIRRTRESLSRERLLGDGRSQRSNSLSSQSFQAKL
TLQITRDPVLDRSTGHGFALTTDSPLLVRDVAPGSPADGILFPGDQVLQINDKVMEDLSA
ELVENILRELEDCINVTILRHMTNPKSSIMSAEKRARLRSNPVKVRFAEEVVVNGHTQGN
SLLFLPNVLKVYLENGQTKAFKFDNTTSVKDIVLTLKEKLSIRVIEYFGLVLEQQYSITK
LLLLHEDELIQKVVQKKDSHDYRCLFRVCFIPRDPTDMLQEDSLAFEYLFLQSVGDVLQE
RFAVEMKCNTALRLAALHMHERLDSCGQTRTSIKSITKEFGLDSFISPTLLSNMREKDLR
KAISYHLKKIQSLLEPRQKVITATQARLAYLTQLGELISYGGRSYTATMMLQDREVMVSL
LVGAKYGLSQVINHKINMISTLVEFSSISKVELLSESDKVSLLRISLHDMKPFALLMDSM
AAKDLGCLLGGYCKLLVDPSVNVFRLGRPKVRVHRVPAEEGVCGRFAVIEGVCYESLTSY
VSRCCSESDVSTDDDDPMDSQSYKGSDPASTDWEERRRGEEKKRKEEERKEREQHKGKQE
VKIIVTTEGKDNESEEEVGATGNGLCKFKVVDEEMNLETSWYHTDPRVTSSFSSLSSSSL
STALDESNAVAKAPSHLDALRGSSPGEDPSNLDVHHPYLLEPKRQGPLRPTNLNYRGNDN
SFLCFAELSKDDFLPSPAGATSDDDDDDDDEEEEDLGIHKLRRISKIPSSRDLRMIDSTP
FERLPIKRKKKTPPKVPVRTSSIPGSKSAQVEHRLSKDEDSLFLTPSPNPKPALLLKDNV
SESEDEFFDAQDRFTPPVPDFSDAELADRRNANRLSGTWNSLPSVQGKEPSSPLASKPRS
PKMKKESELVKDSTNQLVHPQPSASKSCQKPETKVKPPLAPKPQLLPKPQMMPPKSPQHG
RSYAQCNGDASGHLSSELLEMEPDTMEFKSVTLGGLPLPSSMITAVRCKKQTVTNTTLQS
EEKTNKQENNLQLNKNLLRENGSHVFTSDKTLISDKKETSRTDEKVNGSNILTKSPPSSH
SVPRSNSGTKLALPPPVPPKPTSSISFHPLSLPASSPVSPTDPNKGMFKDSISTSNGIHP
WNNRNGSIQSGPRRVSQSHESLSPKNTDPPLTITTSPTSVDCKGVGGLDSREPGRSGSGS
DLRTSSSSLGGRLPASALRGKIQSLPWYMTRSQEILGNLDYPSTSSINGDTSGFGSGLSV
ASGLSDLNKTPVKDKESIASKSGSKGSILDDGAEVVIATIKEAPEVSSHMKKASGTNGSH
PNLSFRDNSPHSGSVSSEQPQSRPHSAVGLGGVTSMQIGGDSPTSSGADTTPPQQHRESC
GCRTVYANCFSGDTEDGVSFDEELTVYEFSRRIRPKPAQASSPTTPSPKPNILSLLRDNP
RPLSTFSTASSELSPLVSCPVSPTVSLSGRLRSLTNKNYGGLKGGFASLREDIDQLLLVL
ERGALDQPQQFSKLKSTDLNHNGTEDNTAVGQGCTGISPIIMTEPERSLLQAEARRLASG
CQRATRVGWAPDEALRSLTTSFSALVQLSAACLKTNPCPGCDVCHKARLVNKDEDDDGQQ
PMDKLKEIVGLYREFVGAVETAGTGGVNGSRSVGSGQSQGEEDGVRLLAKRCTLLISSVF
ALTQLFRTSTHETTDTPGRVPLNF
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaatgagcgatgcaggagcaggtctccagctcggaggaccaatcgggtgcag
caggtggtgggaacaataatccgacgcactcgagagtctctgagcagagagcgtctcctt
ggcgatgggcggtcgcagcgctccaacagtctgtccagtcagagcttccaggctaaactg
acgctgcagatcaccagagaccccgtcctggaccggagcaccggacatggcttcgctctc
accacggacagccccctgctggtcagggatgttgccccagggagccctgcagatggaatc
ctattcccaggagaccaggtgctgcagataaatgataaagtgatggaggatttgagtgcc
gagctggtggagaacatcttgagggaattggaggattgcattaatgtgactattctgcgg
cacatgacaaatccgaagtcatccataatgtcagcagagaagagagctcgtctgaggagt
aatccagtcaaagtgcgctttgcagaggaggtggtggtcaatgggcacactcagggaaac
tctcttctcttccttcctaatgtcctgaaagtctatctcgagaatggccagaccaaggcc
tttaagtttgacaatacaacctctgtgaaggacattgttctgactctgaaggaaaaactg
tccatccgtgtgattgagtactttggtctggtactagagcagcagtatagcatcacaaaa
ctattgctactgcatgaagatgagctcatacaaaaggtggtgcagaaaaaagactcacat
gattatagatgtctgttcagggtttgcttcattcccagagaccccacagacatgctgcag
gaggactccttagcctttgagtatctctttttgcagagtgttggagatgtgctacaggag
cgttttgctgtggagatgaagtgtaacacggcgctccgtctggctgccttgcacatgcat
gaaagacttgatagttgtggacagacccggacatctatcaagagcattacgaaggagttt
ggcctggacagctttatctcacccacgctgctgagcaacatgagggagaaggacctgagg
aaggcaattagttaccacctcaaaaaaatccagtccctgcttgagccacgacagaaggta
ataacggctacgcaagctagattggcctaccttactcagcttggagaactcatttcttat
ggtggacggtcttacacggccacaatgatgcttcaggacagggaagtgatggtcagcttg
ctagtaggtgccaagtatggattgagtcaagtcattaaccacaagatcaacatgatatcc
acattggttgagttcagcagcatcagcaaagtggagctgctatccgagtcggacaaagtc
agcctgctgcgcatttcactgcatgatatgaagccatttgccttactgatggattctatg
gctgccaaagacttagggtgtttgctgggaggctactgcaaactcctggtggatccaagt
gttaatgtcttccgtctggggcgcccgaaagtcagggtgcaccgggttcctgctgaagaa
ggtgtgtgtgggaggtttgccgtaatagagggagtgtgctatgaatccctaacaagttat
gtctcccgctgctgcagcgagtcagatgtctccacagatgatgatgatccaatggattcg
cagagttacaaaggctcagaccccgcaagtacggactgggaagagaggagaagaggggag
gaaaaaaagagaaaagaggaagagagaaaagaaagagaacaacacaaaggcaaacaggaa
gtaaaaataatagttacaacagaaggcaaggataacgagagtgaagaggaagtaggtgca
acaggaaatggcttatgtaaatttaaagttgtggatgaagaaatgaacctggagaccagc
tggtaccacactgatccaagagttaccagcagcttctccagcttgtccagcagttccttg
agcactgcattggatgaaagcaatgctgtagccaaagccccttctcacctggacgctctt
cgtggatcaagcccgggtgaagatccttcaaacctggatgtgcaccacccttacctcctt
gagccaaagcgtcaaggacccctgcgacccacaaacctaaactaccgtggcaatgataat
tctttcctctgctttgcagagctctccaaggatgatttcttacctagtccagcaggagcc
acaagtgatgacgatgacgatgatgatgacgaggaggaggaggacctgggtatacacaaa
ctgagacgcatatctaagatccctagttcaagagatctgagaatgatcgacagcacaccg
tttgaacgactgcccattaaaagaaagaaaaagactcctcccaaagtcccagtaagaaca
agttcaattcctggaagtaaatcagcacaagttgagcaccgcctgtctaaagatgaggac
agtctctttcttactccttcgccaaatccaaaaccagctcttttgttaaaggacaatgtc
tcagaatcagaagatgagttttttgatgcacaagatagatttaccccaccagttccagat
ttttcagatgctgaactggctgatcggcgaaatgccaatcgtttgagtggaacctggaat
agtcttccatctgtccaaggaaaagaaccatcatcccctcttgccagtaaaccccgatca
cctaaaatgaagaaggaatccgaattggtaaaagattccacaaaccaacttgttcaccca
caaccgagtgcttcaaagtcatgtcagaaacctgaaacaaaagtcaaaccaccactggca
cctaaaccccagttgcttcccaaacctcagatgatgcctcccaagtcaccccaacatgga
agatcatatgcccagtgcaatggagatgcctctggacatttgtcttctgaacttttggaa
atggagccagatacaatggagttcaagtctgtcacattaggtggattgcctcttccttca
tcaatgattacagcagtgagatgtaaaaaacagacagtaacaaacacaacactgcaatca
gaggaaaagactaacaaacaggaaaacaacttgcaactaaacaaaaatctgctgcgtgag
aatggatcacatgtttttactagtgacaaaacattaatttcggataaaaaggaaacatca
agaactgatgagaaagtcaatggatctaatattctaacaaaaagtccaccaagctcacac
tctgtccctcgctcaaattcgggcacaaagttagctcttcctccaccggttccccccaaa
cctacttcttccatcagttttcatccattatctttacctgctagttctcctgtgtctccc
actgatccaaataaagggatgtttaaggattctatcagtacatccaatgggatccaccca
tggaacaatcgcaatggcagcatccagtcaggacctaggagggtttctcagagccatgag
agcctttctccaaaaaatacagatccaccgctcactattaccacctcacccacctcagtt
gattgtaaaggtgttggaggccttgacagcagagaacctggtcgatctggttcaggatct
gatctgagaactagctcctccagccttggaggtagactaccagcttctgctctgagagga
aagatccagtctttaccatggtacatgactcgttcccaggagattttaggaaatctggac
tatccctccacaagttctatcaatggagacacatctggctttggttccggtttgtctgta
gcaagtggtctatcagacttaaacaaaacccctgtaaaggacaaagagtcaatagcctca
aaatcaggaagtaaaggaagcatcttagatgacggagcagaggttgtcattgcaaccatc
aaagaggctccagaagtaagttcacatatgaaaaaggccagtggaacaaatggctcacat
cctaatctgagttttagagataacagtccacacagtggcagtgtttcttcagagcagcca
cagtcacggcctcattcagctgtcggcctgggaggtgtgacaagcatgcagattggaggg
gactcaccgacctcctctggagcggacactactcctccacagcaacatcgggagtcttgt
ggctgtcgcactgtctatgccaactgtttcagtggagacactgaagatggggttagcttt
gatgaggaactcacggtttatgagttctctcgccgcatacgccccaaacctgctcaggca
tcttctccaacaacaccctctccaaaacccaacattctgtcacttctgagggacaaccct
cggccactgtcgactttctctactgcatcctctgaactgagtcctctggtttcatgtcca
gtttcacctacagtttcactcagtggtcgtcttcgttcccttaccaacaagaactatgga
ggactaaagggtggctttgcctctctgcgggaagacatagatcaacttctacttgtatta
gagaggggggcacttgaccagcctcaacaattctcaaaactgaagagcacagacctaaat
cacaatggaacagaagacaatactgctgtaggacagggctgcactggaataagtcctatc
attatgacagagcctgaaaggagtcttctccaggcagaggctcgtcgactagcatctgga
tgtcagcgagccacacgtgttggctgggctccagatgaggctcttcgttctttaaccact
agcttcagcgcactggttcagctgtcagctgcctgcctgaaaacaaacccctgtcctggt
tgtgatgtctgccataaagcaagacttgtcaacaaggatgaggacgacgatgggcagcag
cctatggataaattgaaggagatagttggtctgtaccgagagtttgttggagctgttgaa
acagctgggactggtggtgtgaatggtagtaggagtgtggggtctggacagagtcaagga
gaggaagatggagtgaggttgcttgccaagcgctgcactttgctcatatcatcagtgttt
gcactcacacaactcttccggacatccacacatgaaaccacggacacacctggccgtgta
cctctcaatttttga
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integrated database retrieval system
