Gambusia affinis (western mosquitofish): 122838105
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Entry
122838105 CDS
T07758
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122838105 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gaf03041
]
122838105 (prpf38a)
Spliceosome [BR:
gaf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
122838105 (prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
122838105 (prpf38a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
122838105
NCBI-ProteinID:
XP_043984428
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All DBs
Position
LG10:29011228..29016157
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AA seq
309 aa
AA seq
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MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTAVDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHAERVCDIILPRLQKRQVLEEAEMLDPR
VSALEEDLDEVESSEEEDEEEEKFERLPSPEPHRRGHRDNDRPRRSPSPRYRRSRSPRRR
SRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSKSPGHHRSHRHRSHSKTPERSSKKS
HKKSRRGND
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacagaaccgttaaagatgcaaacagcatccacggaacaaacccacagtacctg
gtggagaaaatcatccggacccgaatctacgagtccaaatactggaaggaggaatgtttc
ggtctgaccgcggagctggtggtggacaaagccatggagctgaagtttgtgggaggagtt
tatggcgggaacatcaagccgacgccgttcctctgcctcacgctgaagatgctccagatc
cagccggagaaagacatcatcgtggagttcatcaaaaacgaggattttaaatacgtccgt
ctgctgggagccatgtacatgaggctgaccggcaccgccgtggactgctacaagtacctg
gagccgctttacaacgactacaggaagatcaagagtcagaaccggaacggagagtttgag
ctgatgcacgttgacgagttcatcgatgagctgcttcacgcagagagagtgtgtgacatc
atcctgccgcggcttcagaagaggcaggttctggaggaagccgagatgctggacccgcgg
gtcagcgctctggaagaagacctggacgaggtggagagcagcgaggaagaggacgaggaa
gaggagaagttcgagaggctgccgagtccggagccccacagacgtggtcaccgtgacaac
gaccggcctcgccgctcgccgtcgcctcgctacagacgcagccgctctcctcgccggcgg
agccgatcgcccaagagacgaagcccgtcgcctcgcagagagcgccaccgcagcaagagc
ccgcggcgccaccgcagccgctcccgggaccggcggcaccgctccaaatcacccggtcac
cacagaagccacagacatcggagtcactccaaaaccccggagcgaagctccaaaaagagc
cacaagaagagccggagaggaaacgactga
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