Gambusia affinis (western mosquitofish): 122838139
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Entry
122838139 CDS
T07758
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04145
Phagosome
gaf04510
Focal adhesion
gaf04512
ECM-receptor interaction
gaf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122838139
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122838139
09144 Cellular community - eukaryotes
04510 Focal adhesion
122838139
09142 Cell motility
04820 Cytoskeleton in muscle cells
122838139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122838139
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gaf04147
]
122838139
00536 Glycosaminoglycan binding proteins [BR:
gaf00536
]
122838139
Membrane trafficking [BR:
gaf04131
]
Endocytosis
Phagocytosis
Opsonins
122838139
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122838139
Exosomal proteins of colorectal cancer cells
122838139
Exosomal proteins of bladder cancer cells
122838139
Glycosaminoglycan binding proteins [BR:
gaf00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
122838139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
COMP
EGF_3
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
122838139
NCBI-ProteinID:
XP_043984478
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All DBs
Position
LG10:28273612..28289731
Genome browser
AA seq
748 aa
AA seq
DB search
MLRFVALTCVLCMGGNLVTGQRDGEIISQIKMTNLALAEIKELLKQQVREIVFLKNTVME
CEACGMGGIQPVSPCEPNPCHPGVRCSESPEGPQCGACPDGMEGNGTRCTDVDECKVMPC
HMGVRCINMSPGFRCGSCPAGYTGPQVQGVGLAYATANKQVCKDIDECEGPSNGGCVENS
VCLNTPGSFRCGPCKPGYVGDQRLGCKPERACGNGQPNPCHASAKCIVHREGTIECQCGV
GWAGNGYLCGTDTDIDGFPDEKLNCPDLTCNKDNCLTVPNSGQEDADNDGIGDACDDDAD
GDGIPNTQDNCKLVPNVDQRNIDEDDFGDACDNCREVKNNDQKDTDLDKLGDECDDDMDG
DGIINVLDNCKRVPNVDQKDRDGDKVGDACDSCPYVPNPDQMDADNDLIGDPCDTNKDSD
GDGHQDSRDNCPAVINSSQLDTDKDGKGDECDDDDDDDGIPDLLPPGPDNCRLVPNPLQE
DLDGDGVGDVCEKDFDNDTIIDPIDACPENAEVTLTDFREYQTVVLDPEGDAQIDPNWVV
LNQGREIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVM
WKQVEQIYWQANPFRAVAQQGIQLKAVKSSTGPGENLRNALWHTGDTGDQVKLLWKDPRN
VGWKDKTSYRWFLQHRPADGYIRVRFYEGPQMVADTGVIIDATMRGGRLGVFCFSQENII
WANLRYRCNDTLPGDFDTYRTQQVQLVA
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgctgcggtttgtagcgctgacctgcgtcctctgcatgggaggaaacctcgtaacggga
cagagggatggagaaattatcagtcagattaaaatgacaaacctcgctttggccgaaatt
aaagagctgctgaagcaacaggtcagagaaatagtgttcctaaagaacacagtgatggaa
tgtgaagcctgtggaatggggggcatccagcccgtctctccctgtgagcccaacccctgc
caccccggtgtgaggtgctcagagtcccctgagggcccgcagtgtggagcctgtcctgat
ggcatggagggcaacgggacgcgctgcacggacgtggacgagtgtaaggtgatgccgtgc
cacatgggggtccgctgtatcaacatgtccccgggtttccgctgcggttcctgtcctgca
ggatacaccggacctcaggtccagggggttggacttgcttacgccactgccaacaaacag
gtgtgtaaagatatagacgagtgtgaaggtcccagcaacggcggctgtgtggaaaactct
gtctgtctgaacactcctggctcgttcaggtgcggtccctgtaagcccggctatgttggg
gaccaacgacttggctgtaagcctgagagagcctgtgggaacggccagcccaatccctgc
cacgccagcgccaagtgcatcgtccaccgagagggaacaatcgaatgtcagtgtggagtg
ggatgggcaggtaatggatacctgtgtggaacggacaccgacatcgatggtttccctgac
gagaagctgaactgtcctgacctgacctgtaacaaggataactgcctcaccgtgccgaac
tccggccaggaggacgccgacaacgatgggattggagatgcctgtgatgacgacgcagat
ggggatgggatcccaaacacacaggataattgcaagctggtgcccaacgttgatcagaga
aacatcgatgaggacgactttggtgatgcgtgcgacaactgcagagaggtgaaaaacaac
gaccagaaagacacggatctggacaaactcggtgatgaatgtgatgacgatatggatgga
gatggaatcataaatgtcctggacaactgcaaaagggttcccaatgttgaccagaaagac
agagatggagacaaagttggagacgcctgcgacagctgtccctacgttcccaacccggac
cagatggacgcagacaatgacttgattggagatccatgtgacaccaacaaggacagtgat
ggcgacggacaccaagactcccgggacaactgcccggccgtcatcaacagttctcagctg
gacacagacaaagacggaaagggggacgagtgtgatgacgacgatgatgatgatgggatc
cctgacctgctgccgcctggtcctgacaactgccgtctggtgcccaaccctctgcaggag
gacttggatggtgatggtgtgggtgatgtgtgtgagaaggattttgataacgacaccatc
atcgatcccattgatgcctgtcctgaaaatgcagaagtcacccttactgacttcagggag
tatcagacggtcgttctggacccggaaggagacgcacagatagaccccaactgggtggtg
ctgaaccagggaagagaaatcgtccagactatgaacagtgatcctggtctggctgttggc
tacactgcgttcagcggcgtggattttgaagggacgtttcacgtaaacacagtaacggac
gacgactacgctgggtttatcttcggctaccaggacagttccagcttctacgtggtgatg
tggaagcaggtggagcagatctactggcaggcgaacccgttcagagccgtggcacagcaa
ggcatccagctcaaggcggtgaagtcgagcacaggtccgggtgagaacctgaggaacgcc
ctgtggcacaccggagacaccggagaccaggtgaagctcctgtggaaagatcctcgcaac
gtgggctggaaggacaaaacttcgtaccgctggttcctccagcaccgaccggctgatggc
tacatcagagtccgtttctatgagggccctcagatggtggcagacaccggagtcatcata
gacgccacgatgagaggaggccggctgggcgtcttctgcttctcccaggagaacatcatc
tgggccaacctgcggtaccgctgcaacgacactcttcctggggacttcgacacctacaga
acccagcaggttcagctggtggcctga
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