Gambusia affinis (western mosquitofish): 122838210
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Entry
122838210 CDS
T07758
Symbol
colgalt2b
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf00310
Lysine degradation
gaf00514
Other types of O-glycan biosynthesis
gaf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
122838210 (colgalt2b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
122838210 (colgalt2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
gaf01003
]
122838210 (colgalt2b)
Enzymes [BR:
gaf01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
122838210 (colgalt2b)
Glycosyltransferases [BR:
gaf01003
]
O-Glycan biosynthesis
O-linked Gal type
122838210 (colgalt2b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
122838210
NCBI-ProteinID:
XP_043984604
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Position
LG10:11456545..11491078
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AA seq
610 aa
AA seq
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MRAVAELWAVLATLVAGAASELVTLVQEQVKPESPVLPPKVMIAILARNAAHSLPHYLGC
IERLEYPKERIAIWAATDHNVDNTTAMLREWLKRAQRIYHYVEWRPMEEPSSYTDEWGPK
HWPPSRFNHLMKLRQAALKAARERWADYILFADSDNLLTNPRVLDLLMAENLTLVAPMME
SRSLYSNFWCGVTPQGYYKRTPDYQPIREWKRLGCFPVPMVHSTFLLDLRRESSRDLAFY
PPHPDYSWAFDDIMVFAFSARQSGVQMYVCNREHYGFLPVPLKAQQNVEDETESFIHTIS
EALIEHDMEPSQYIYTPPLPPDPMGFNDIFLINLKRRLDRRTRMLKTMGAMGLRPTLIDA
VDGKALNTSQLQALGIEMLPGYKDPYSGRVLTRGEIGCFLSHHSIWKQVVDRGLQKVLVL
EDDVRFEPRFKRRLQAIMEDVDRAQLDWDLIYVGRKRMQVQQPEHSVEGVNNLVEADYSY
WTLAYALSQQGARKLLGVQPFTKMLPVDEFLPIMFNKHPNVQYMSHFEPRDLKAFSVEPL
LLYPTHYTGEPGYISDTETSTIWDDEAVATDWDRQHARKTAQQGRIRPVAQNSVTGDSPP
PAARASRDEL
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcggtcgctgaactgtgggccgtgctggccacgctggtggccggcgccgcgtcc
gaactggtgacgctggtgcaggagcaggtgaagcccgagtcgccggtgctgccgccgaag
gttatgatcgcgatcctggctcggaacgcggcgcacagcctgccgcactacctgggctgc
atcgagaggctggagtacccgaaggagcgcatagcgatatgggcagcgacagaccataac
gtagacaacaccactgccatgttgagagaatggctgaagagagcgcaacgcatttatcac
tatgtggagtggagaccgatggaggagcccagctcctacacagatgagtggggtccgaag
cactggcccccttccagattcaaccatctaatgaagctgcggcaggcggccctgaaggct
gcgcgggagcgatgggccgactacatactgtttgctgacagcgacaacctgttgaccaac
ccccgagtgctggacctgctgatggctgagaatctgacgctggtcgctcccatgatggag
tctcgctctctctactccaacttctggtgcggcgtcaccccacagggttactacaagcgt
accccggactaccagccaatcagggagtggaagaggctcggctgtttccctgttcccatg
gtgcacagcaccttccttttggaccttcggcgcgaatccagccgagacctggcattctac
ccacctcatccggactacagctgggcctttgatgatatcatggtgtttgccttctcggca
cgtcaatcaggggtgcagatgtacgtgtgcaatagggaacactacggcttcctgcccgtc
ccgctcaaagctcaacaaaatgtggaggacgaaactgagagtttcatacacaccatctca
gaagctctgattgaacacgacatggagccgtctcagtacatctacactccgccgttaccg
ccagacccaatgggcttcaatgatattttcctgattaacttgaaacgccgactggacaga
agaaccaggatgttgaaaacaatgggcgccatgggccttcgccccactctgattgatgca
gtggacgggaaagctctaaatacatcccagctgcaggcactgggaattgagatgttgcca
ggctacaaggatccatattctggtcgtgtcctcaccagaggggagattggctgcttcctg
agtcaccactctatatggaaacaggtggttgatcgtggtctgcagaaggttctggttctg
gaggacgatgtgaggtttgaacccaggtttaaacgacggcttcaggccatcatggaggac
gtagacagagcccagctggactgggacctcatctacgtgggaagaaagcgaatgcaggtg
cagcagccggagcattcagtggaaggtgtgaacaacctggtggaagccgactattcctac
tggaccctggcctacgctctttcacagcaaggggcccgaaagttgttgggggtacaacct
ttcaccaagatgctccctgtcgacgaatttcttcccatcatgttcaacaaacaccccaat
gttcagtacatgtcccatttcgagccacgggacctgaaggccttctccgtggagccgctg
ctgctctatcccacccactacaccggcgagccgggctacatcagcgacaccgagacttcc
accatctgggacgacgaggcggtcgccacagactgggaccggcagcacgcccgcaagacg
gcccagcagggccgcatccgacccgtagcgcagaacagcgtcactggagactcgccgcct
cctgctgcccgagcctcgcgcgacgagctctga
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