Gambusia affinis (western mosquitofish): 122838291
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Entry
122838291 CDS
T07758
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03250
Viral life cycle - HIV-1
gaf04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122838291 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
122838291 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122838291 (samhd1)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
122838291 (samhd1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
HD
PDEase_I
SAM_TNK
Motif
Other DBs
NCBI-GeneID:
122838291
NCBI-ProteinID:
XP_043984764
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Position
LG01:28063875..28075072
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AA seq
627 aa
AA seq
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MDSRKRPMGPAASSDEEFKTPEKRVSVVRGSPPDSGFMRWGVEETCQYLQREGLEEWKDK
FRAERITGVGLRYLKDEDLEKIGIKCLGDRLRILHNLRKLWQVEAEPSKVFNDPIHGHVE
LHPLLIKIIDTPQFQRLRNIKQLGGTYYVFPGASHNRFEHSIGVGHLAGRLVQALNEKQP
ELLISHRDILCVQIAGLCHDLGHGPFSHMFDGMFIPKARPGIKWKHEAASLKMFDYLVDD
NCLRPVMEEHGLVLPEDLDFIKEQIAGPTESSSDRGEKWPYKGRSKEKSFLYEIVANKRN
GIDVDKWDYFARDCYHLGIQNNFDYQRFLKFARVCEVDGEKHICTRDKEVGNLYDMFHTR
NCLHRRAYQHKVGNIIETMITEAFLKADPHIHIEGSQGNIFTLSTAIDDMVAYTKLTDNV
FEQILNSSNQKLAESRLILNKIICRQLYKCLGQTQPDKALTVTQENIHIWEAELAQSIPH
SGSPDVDLQPGDFVVSVITMDYGMKEKNPINNVRFYCKDDPTKAIKINKNQVSKLLPERF
AEQLIRVYCKKTDEKNLEAAKKHFVQWCMNRNFSKPQDGDVIAPELTPLKPSWCTNNEDE
DSDSCSSKETNVHMNGVKKAKTQLNFQ
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atggacagtcgaaagcgacccatggggccagctgctagctcggatgaggagttcaaaacc
ccggagaagagagtgtcagtggtccgaggctcgcctccggactccggcttcatgcggtgg
ggagtcgaggaaacttgtcaatacctgcaaagagaaggacttgaagagtggaaggataag
ttcagagctgagaggattacaggtgtgggactgaggtaccttaaggatgaggacctggaa
aagattggcataaagtgtctcggtgaccgtctacggattctgcacaacctcaggaaactg
tggcaggttgaagctgagcccagcaaggtcttcaacgatcccatccatggccacgtggag
ctgcacccacttctcattaagatcatcgacacgcctcagtttcaacgacttcgaaacatc
aagcagcttggagggacgtattacgtttttcctggggcctcccacaaccgctttgaacac
agcattggggttgggcacttggctggacgacttgttcaagctctcaacgagaagcagcca
gaactcctcatctctcacagggacattctttgcgtgcagattgctggactctgccatgac
ctcggacatggacctttttcccatatgttcgatggcatgtttatacccaaagcacgtcca
ggaattaaatggaagcacgaggctgcctccctaaaaatgtttgactaccttgtggatgac
aactgtctcagaccggtcatggaggagcacggtctggtgctgccagaggacctggacttt
atcaaggagcagatcgcaggaccaacagagagcagctcagatcgaggagagaagtggccg
tacaaaggccgttctaaagaaaagtccttcctctatgagattgtcgctaacaagaggaac
ggtatcgatgtggataaatgggactattttgcaagggactgctatcatctgggcatccag
aacaactttgactatcagcgcttcctaaaatttgcaagggtctgtgaagtggatggagag
aagcacatctgcacaagagacaaggaggtgggcaatctgtacgacatgttccacactagg
aactgtctccacagaagagcctaccagcacaaagtgggcaacatcatagagacaatgatc
actgaagcttttttaaaagcagatccacacatccacattgaaggctctcagggaaacatt
ttcactctgtccacagctattgatgacatggtggcctacacaaagctgacagataatgtg
tttgaacagatcctgaactcgtccaatcagaagcttgcagaatcaaggctgatactgaac
aaaatcatctgccgccaactgtacaagtgtctgggtcaaacccagccggacaaagccttg
accgtcactcaggaaaatattcacatttgggaggcagaattggctcagtccatcccccac
agtggctctcctgatgttgatcttcagccaggggactttgttgtcagcgttatcacgatg
gactatgggatgaaggaaaagaaccccatcaataacgtgcgtttttactgcaaggatgac
ccaacaaaagccataaaaatcaataaaaaccaggtgtctaaacttctcccagagcgcttt
gctgaacaactgatcagggtgtactgcaagaagacagatgagaagaacctggaggctgcc
aagaagcactttgttcagtggtgcatgaacaggaacttctcaaagcctcaggacggtgat
gtcatagcacctgagctgactcctctgaaacccagctggtgcaccaacaatgaagacgag
gacagtgatagctgcagctccaaagaaacaaacgttcacatgaacggagtcaagaaagcc
aagactcaacttaactttcagtga
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