Gambusia affinis (western mosquitofish): 122838482
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Entry
122838482 CDS
T07758
Name
(RefSeq) voltage-dependent R-type calcium channel subunit alpha-1E isoform X1
KO
K04852
voltage-dependent calcium channel R type alpha-1E
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04010
MAPK signaling pathway
gaf04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122838482
04020 Calcium signaling pathway
122838482
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122838482
Ion channels [BR:
gaf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122838482
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
122838482
NCBI-ProteinID:
XP_043985094
LinkDB
All DBs
Position
LG10:complement(14305347..14403600)
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AA seq
2523 aa
AA seq
DB search
MLELGSCSVSSQSLTDDHNALGRPPISGGPDSPAAGFGQMCGSSSPRHHVLHPSPTDCES
WQKHRGGLAGGSSPCSEPHPLLEPQSLSTSYDTLYLPQMTGQAQTLHPNRLGLSLDVAST
FDVGGGMLGVDGDLVVSPNVIKRRRGGLIEQKDIVKAHQAHKIQSTPQARRKEWEMARFG
DDVPGLLSSGDGGSERNRNRDGAAMSTGGISPAFKQTKAQRARTMALYNPIPVRENCFTV
NRSLFIFGEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPGEDKTPMSKRLE
KTEPYFIGMFCFEAGIKIIALGFVLHKGSYLRNGWNVMDFIVVLSGILAAAGAHMNISVD
LRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLEFYSG
KLHKTCTPQLGILENETVDSSEYIFPCGVRQCPAKYACSETWIGPNDGITQFDNILFAVL
TVFQCITMEGWTTVLYNTNDALGPTWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERER
VENRRAFMKLRRQQQIERELNGYRAWIDRAEEVMLAEENRNTGPSALDVLKRATTIKRRG
MDVRQGQSGEEHYGDISSVGMPMARASVRSAKRGPTAYFRRKERLLRISIRRVVKTHTFY
WTVLGLVALNTLCVAIVHHNQPSWLSNFLYYAEFLFLALFLTEMFLKMYSLGPRLYFHSS
FNCFDCSVIIGSIFEVLWGFFRPGTSFGISVLRALRLLRIFKITKYWASLRNLVVSLMNS
MKSIISLIFLLFLFIVVFALLGMQLFGGRFIFEDYTPTNFDTFPAAIMTVFQILTGEDWN
EVMYDGIRSQGGVKSGMWSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEEAE
AAFNQKHALQKAKEVGPLSSFMSSEGSRRRRPYLYRKRAIHRSRPTYSYSLEEAQGSMRE
GRPPPPLKPSNSFMSRRERRKRMTMSVWEQRTSQLRRHRQMSSREILFSSPSEEKDGPPA
SVHGRPLSLHRKAVQHTPSGSMKQPTDPLASPGQTQPLASSVPLDATVPGDIPQPPMAVL
ESECLDPTNVPCLTLPEPPESESTEENKKPGLNHKHVSERRSPRLNVERQHRHVKKFRPP
DNVDTLTPETGGHIEIRGRRGHHCDHRSGTRNQASSPGYEGKLDGSYDVGESRTSSGIVE
EKGPEPENEDGEVHKHEESRLTNRNEGGNSNLKDVLSSDLCPLKQDNALNQSELLVPSKP
EDNSEEKESELDHNKLSSSVIIEVPGVQSSLELSTITVNNKDPETCKSEKEEAEETKPVN
TVTPDSMFIFKPDNPMRRACHYVVNLRYFEMCILLVIAASSIALAAEDPVATSSDWNKVL
RYFDYVFTGVFTFEMIIKMIHQGLILHDGSYFRDLWNILDFIVVVGALVAFALTNVMGNN
KGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVTSLKNVFNILIVYKLFMFIFAVI
AVQLFKGKFFYCTDSSKDTEKDCQGYYIDYGKDKKEVKKRDWKRHEFHYDNVIWALLTLF
TVSTGEGWPQVLQHSVDVTEEDRGPSHGNRMEMSIFYVIYFVVFPFFFVNIFVALIIITF
QEQGDKMMEECSLEKNERACIDFAISAKPLTRYMPQNRHTFQYRLWHFVVSPSFEYTVLT
MIALNTIVLMMKYYSAPPAYDAFLKHLNTAFTILFSIECVLKILAFGFLNYFRDTWNIFD
FITVLGSITEIVVDLQRIDTFNMSFLKLFRAARLIKLLRQGYTIRILLWTFVQSFKALPY
VCLLIAMLFFIYAIIGMQVFGNIKLNEETHINQHNNFKTFLGALMLLFRSATGESWQEIM
LSCLGGQQCETDPSLPLPALTTDQRESCGSDFAYFYFVSFIFFSSFLMLNLFVAVIMDNF
EYLTRDSSILGPHHLDEFVRIWGEYDRAASGRIHYTDMYEMLTNMSPPLGLGKKCPSKVA
YKRLVLMNMPVDDDMTVHFTSTLMALIRTALEIKIARGGEDRNQMDLDLQKEIGVIWPHL
SQKSLDLLVPIHKASDMTIGKIYAAMMIMDYYKQSKAKKLRQQLEEQKHAPMFQRMDASS
LPQEILCNAKSLSFLRHSAESALTRGGFVALSPISPQELFLQPRPRSREQKVEEEDDDYH
SPYRLYPHPHHHHHQQHHHHHLHALVPEVVEYNHLMQQARQDQTVIKSPQHTASIRASSM
PRLAVDPQAAVSEDGRLMKRSFSTIGDQCVNGLWQEQHSLEKISPDGTFRARQRSYRGPK
LSPRETSSHERGRSKERRHLLSPDVSRCNSEERSREPSCERRQSRSPSEGRMHNVQKQVM
ATGSPANSASESSTPRNRRQLPQTPSRPRPYISYSPLVCKPSTSPTAAPLSSEGQSQPQD
AAGGSTETSWRAEKESRPLSAGHCSSGGQISGPSHPSPHRYISEPYLPFHEDFSGDDSGD
RQETLTFESAMATSLGRANAISSAPQLRHSWQVPNGHVRKHLVQGSPTDNSELLSDTDED
DRC
NT seq
7572 nt
NT seq
+upstream
nt +downstream
nt
atgctggaactgggctcatgttctgtcagctctcagtctctgacagatgaccacaatgct
ttggggcgacctcccatctcaggagggcctgacagtccagcagctggttttggacagatg
tgtggcagcagtagccccaggcatcacgtcctccacccatcaccaacggattgtgagagc
tggcagaagcatcggggaggactggctggaggttcaagcccctgctctgagcctcaccca
ctcctggaaccccagagtctgtccaccagctacgacaccctctacctcccacagatgact
ggacaggctcaaactctccacccgaaccgcctcggcctttctctggatgtggcctcaaca
tttgacgttggaggtgggatgcttggggtggatggagatttggtagtcagtcccaacgta
atcaagagacgacggggaggcctgattgaacagaaagacattgtcaaagcacaccaggcc
cacaaaatacagagcacaccacaggctcgacgcaaagagtgggaaatggcccgctttgga
gacgacgtcccgggcttgttgagctctggggatggaggatcggagcgcaacaggaaccgc
gatggagcagccatgtccacaggtgggatctccccggcgttcaagcagaccaaagcgcag
cgcgcccgcaccatggccctgtacaaccccatcccggttagggagaactgcttcaccgtc
aacaggtcgctattcatcttcggagaggacaacgtggtccggaagtatgctaagaaaatc
actgagtggcctcctttcgaatacatgatcctcgccaccatcattgccaactgcattgtc
ttggctctggagcagcacctccctggtgaggacaaaacccccatgtccaagagactggag
aagacagagccttacttcatagggatgttctgttttgaggctgggataaagatcatcgct
ctgggctttgtgcttcataaagggtcctacctcaggaacggctggaacgtcatggatttt
attgtagtcctcagcgggatcctggctgcagcaggggctcatatgaacatctcagtggat
ctgaggacgctgagggctgtgagagtactgcggcccctcaaactggtctcaggcataccg
agtctgcagattgtcctgaagtccataatgaaggccatggtacctcttctgcagatcggt
ctgttgctgttctttgccatcctcatgttcgcaatcatcggcctggagttttacagcgga
aaactgcacaagacttgcacaccacagctaggaatactggaaaatgagacagtggactct
tctgagtacatcttcccgtgtggcgtgcgtcaatgtccagccaagtacgcctgctcagag
acctggattggacctaatgacggcatcacccagtttgacaacatcctctttgcagtcctc
actgtcttccagtgcatcaccatggagggatggaccaccgtgctctacaataccaatgat
gctttgggtcccacctggaactggctttacttcatccctctcatcatcatcggctccttc
ttcgtcctgaacctggtgctgggagtcctttctggagaatttgccaaagagagggagaga
gtggaaaatcgcagagccttcatgaagctgagacgccagcagcagattgaaagagagctg
aacggctaccgcgcttggattgaccgagctgaggaagttatgcttgcagaggagaacagg
aatacaggaccttctgcacttgatgtgttgaagcgagcaaccaccataaagaggagaggc
atggatgtgcgtcagggccagtcaggggaggaacattatggagatatctcttctgtgggc
atgcccatggccagagccagcgttcggagtgcaaagcgaggtccaacagcctattttcga
cgtaaagagcgtctcctgcggatttccattcgccgcgtggtgaagacacacactttctac
tggacagtgctcggccttgtggctctcaacacgctgtgtgtcgccattgtgcaccacaac
cagccctcctggctgtccaattttctttactatgcagagttcctgttcctcgctctgttc
ctgacagagatgttcctgaagatgtacagcttgggaccacgtctctattttcactcctca
tttaactgctttgactgcagtgtaatcattggcagtatctttgaggtgctgtggggattc
ttcagaccaggaacttcatttggtatcagcgtccttcgcgctctccgcctgctcaggatc
ttcaaaatcaccaagtattgggcgtctctgagaaacctggttgtgtctctgatgaactcc
atgaagtccatcatctccctgatcttccttctctttctcttcattgttgtcttcgcactc
cttggcatgcagctttttggtggcaggttcatctttgaagactacacaccaacaaacttt
gacacctttcctgcagccattatgactgtgtttcagatcctgacaggagaggactggaat
gaggtcatgtatgacggtattcgctcccaaggaggagtgaagtcggggatgtggtcctcc
atctattttatagttcttactctttttggaaactatactcttctgaatgtcttcttggcc
attgctgtggataacctcgccaatgcacaggaacttaccaaggatgaagaagaagcagag
gcagctttcaaccagaagcatgctctgcagaaagcaaaggaggtcggaccgctttcctcc
ttcatgtcttcagagggaagccggaggaggcggccctacctgtacaggaaaagagccatt
caccgcagccggccgacctactcctactccctggaggaggcccagggcagtatgagggag
ggccgcccaccgccaccactcaaaccctctaactctttcatgtccaggagagagaggagg
aaaaggatgaccatgtctgtttgggagcagaggaccagtcaactacggagacaccggcag
atgtccagccgagagatcttgttcagcagtcccagtgaggaaaaagatggcccccctgct
tcagttcatggacgtcccctgtcgctgcaccggaaagctgtgcagcacacgccatcaggg
agcatgaagcagccgactgaccctctagcctcaccaggtcagacccagcccctggcctcc
tctgtgccactggatgccacggttcctggcgacattcctcagcctcctatggcagtgctg
gaatcagagtgtctggatcctacaaacgtgccatgcctgaccttaccagaacctccagaa
tccgaatccaccgaagaaaacaaaaagccaggtcttaatcacaaacacgtttctgagcgc
cgaagcccgagactgaacgtagaacgtcaacacaggcatgtaaaaaagtttagacctcct
gataacgttgacactctgacccctgagacaggaggtcacattgagatcaggggccgaagg
ggccatcattgtgaccatcggagcggcaccagaaatcaagcgtcctctcctggatatgaa
ggaaagttagacggcagctatgatgttggagaaagcagaacaagttcgggaatagttgag
gagaagggaccagagcctgagaacgaagatggagaggtgcacaagcacgaggagagcaga
ctgaccaaccgtaacgagggaggaaactctaacttgaaagacgtcctctctagtgacctc
tgccctctgaagcaagacaatgctctgaaccagtctgagctgctggtacccagcaaacca
gaggataacagtgaagagaaggagtcagagctggaccacaataagctcagttccagtgtc
atcatcgaggtgcctggcgtgcagtcgtctcttgaactctccaccatcacagtcaacaac
aaggatcctgaaacctgcaagtcagagaaggaagaggcagaagagacaaaacctgtcaac
actgtgaccccagacagcatgttcatctttaaacctgacaacccaatgcgtcgagcatgt
cattatgtggtgaacctcaggtactttgaaatgtgcatcctgctggtgatagctgctagc
agcatagcactggctgcggaagaccctgtagccacatcatcagactggaataaggttcta
cgttattttgattacgtattcaccggagtcttcacctttgaaatgatcataaagatgatt
caccagggtctgatcctccatgacggctcctacttcagagatctgtggaacatcttggac
ttcatcgttgtggtgggagcactggtggcctttgccctcaccaacgtgatgggaaacaac
aaaggacgagacataaagaccatcaaatctctgagagtgttacgcgtcctcagacctctg
aagaccatcaaacgacttcctaagctcaaggcggtgtttgactgtgtggtgacatctctg
aaaaacgtcttcaatattttgattgtctacaaactcttcatgttcatcttcgccgtcatc
gctgtgcagcttttcaaggggaagttcttctattgcaccgacagttcaaaggacacagag
aaagactgccagggttactacattgactatgggaaggataaaaaagaggtgaagaagaga
gactggaagaggcacgagtttcattacgacaacgtcatctgggctctgctcacactcttc
actgtttccaccggagaaggctggcctcaggttctgcagcactctgtagatgtgacagaa
gaagacaggggtccaagtcacggcaacaggatggaaatgtcaatcttctatgtcatctac
tttgttgtcttccccttcttcttcgtcaacatctttgtggctctcatcatcatcaccttc
caagagcagggggataagatgatggaggagtgcagccttgagaaaaacgaaagagcatgc
atagactttgccatcagtgcaaagcccctgactcgatacatgccacagaaccggcacacg
ttccagtaccgtctgtggcattttgtggtgtccccatcatttgaatacacagtcttgacc
atgattgctctcaacaccattgtcctgatgatgaagtattactctgccccgcctgcatat
gatgccttcctgaaacatctaaacacagcttttactatcctcttctcgatcgagtgcgtt
ttgaagatcctggcttttggttttctgaactacttccgagacacttggaacatttttgac
ttcatcaccgtcttgggcagcataactgagattgtggttgacttgcagaggattgacaca
ttcaacatgagtttcttgaagctgtttcgagccgctcgtctgatcaaactgctgaggcag
ggttacaccatccgcatcctcctctggacttttgttcagtccttcaaggcgttgccttac
gtctgcctgctcattgcaatgctcttcttcatctacgccatcattggcatgcaggtgttt
gggaacattaaactgaatgaagaaactcacattaaccaacacaacaactttaaaaccttc
ttaggtgccctgatgctgctgttcaggagtgcaacgggggagtcgtggcaggagatcatg
ctgtcgtgtctgggggggcagcagtgtgaaacggacccctcgcttccccttcccgccctg
acgacggaccagagggagagctgcggctcagacttcgcctacttctactttgtctccttc
atctttttcagctcttttttgatgctgaacttgtttgtggctgtgatcatggataacttt
gagtatcttacgagagactcgtctatcctgggtccacaccacctggatgagtttgtccga
atctggggggaatacgatcgagctgccagtggtcgtatccattacactgacatgtatgag
atgttgaccaacatgtcgccacctctaggcctgggcaagaaatgcccctccaaagtggct
tataagagacttgtcctgatgaacatgcctgtggacgatgacatgacggtccacttcaca
tccaccctcatggccctcattcgcactgcgctcgagatcaaaatagcaagaggaggagaa
gatcgaaatcaaatggatttggatctgcagaaggaaattggagttatctggcctcacctc
tcccagaagtcactggatctgctggttccaattcacaaagccagtgacatgactatagga
aagatatatgctgccatgatgatcatggattattacaagcagagcaaagccaagaagctg
cgccagcaactggaggaacaaaaacacgcccccatgtttcagcgtatggatgcttcctct
cttcctcaagaaattctatgcaatgccaagtccctgtcatttctccgacacagtgctgaa
tctgctctcaccagaggagggtttgtggcgctcagccccatttctccacaagaactgttc
ctgcagccgcgacctcgctccagagaacagaaggtggaggaagaggatgacgactatcat
tcaccataccgcctgtacccccatccacatcaccaccaccaccaacaacatcatcatcat
catttgcatgcactggtgccggaggtagtggagtacaaccatctgatgcagcaagccagg
caggaccaaacagttattaaatcaccgcagcacactgcatctatcagagcatcttccatg
cccaggctggctgttgatccacaggctgcagtgtcagaagacgggaggctgatgaaacgc
tccttctccaccatcggagatcagtgtgtgaacggcctgtggcaggagcaacactctctg
gagaaaatcagccctgacggcacatttagagctcgtcaaaggagttacagaggtcccaaa
ctcagccctagagaaacaagcagtcacgagagagggagatcaaaagaacggcgccacctg
ctgtctcctgatgtgtcccgctgtaactcagaggagcgaagcagggagccttcctgtgag
aggaggcagtcccgctcaccgagtgaaggacgcatgcacaacgtccagaaacaggtaatg
gcaacaggaagcccagcaaactcagcctcagagtccagtacccctcgtaaccgccgccag
ctgcctcagacgccttctcgtccgcggccttatatctcatactctcctctcgtctgcaaa
ccatcaacctctcccactgctgctcccctctcctctgaagggcagtcccagcctcaggac
gccgccggtggctccacagaaacctcatggcgggctgagaaggagagcagacctctgtcg
gcgggtcactgttcatctggaggtcagatttcaggaccaagccacccatcgcctcatcgc
tacatatcagagccctatctcccattccatgaggacttcagcggtgatgattcaggtgac
agacaggaaacactgacctttgagtctgccatggccaccagtctgggacgggccaatgcc
ataagctctgcccctcagctcagacactcctggcaggttcccaatggtcatgtccggaag
cacttggtccaggggagcccgactgacaacagcgagctgctaagtgacacagatgaggat
gaccgctgctaa
DBGET
integrated database retrieval system
