Gambusia affinis (western mosquitofish): 122838632
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Entry
122838632 CDS
T07758
Symbol
arhgef18b
Name
(RefSeq) rho guanine nucleotide exchange factor 18 isoform X1
KO
K21066
A-kinase anchor protein 18
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
122838632 (arhgef18b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122838632 (arhgef18b)
Membrane trafficking [BR:
gaf04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
122838632 (arhgef18b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
SOS1_NGEF_PH
PH_13
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
122838632
NCBI-ProteinID:
XP_043985334
LinkDB
All DBs
Position
LG10:15061726..15112989
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AA seq
1669 aa
AA seq
DB search
MADSPLNHSWPSFSKLWMKRWSFKRASECNPCSQSCGNPSTQLRVQPPSGKGSSSSLPPA
SITEDVFSDNTSDDQDASSVLSDYDCPCVDAGSSLEDLQGLSSSLRDSEYFKDLQGELPA
SKAAASKDTSAFPESNTQQTDNLQDPVNTNSQTKNQPTALTTDFPQVNATSFPSFEQFAD
QPPSDAVAQLSPKPLPGCVADGDDFAASAFSLNWTVNLNGLLESLETVKAVEELNDVKDQ
GKMELDGEPDMDSFPILVRSMSTSRRHSWGVPLSPLNSGRRLSLDTAAIDSDEDGDDDDE
QHSSLFQSSQQQSDSFSAGAGDEPDGFSLRVTGGSGRHLYSRSDILATDEYSRAAHISRV
VQTSKQAARAAGVAEEFDPEENLHSSEGQSHMLMVQKVLQELKLYYGAKHRNTSSPDSKD
SGSVTWYEFLSNANEEEEDRAEKAEKGTKVKRTLSSLRSRVTGSFNKDKGKNRGKELQRE
RDREEKEKVCRTGSSSSNGHHFVPGSFSSSATCSLCSKSLLKKHGMQCMNCAVNVHKSCK
SLLGECTSSKNKRDFHSRGSGSASPSLALKDRDREKDQAGRDSAQAADGHRGFPGVPGMT
VSSFGASTQPSASLSSSFSAAPACSVGPSLRHHSSSGSLPGDMDEIDSLRSKRCNDDAVS
LAPSIAESIIVEDAHYAAVRADLESDAQDLEADSWSLAVDQHYLKKHSKDVAKRQDVIYE
LMQTEMHHVRTLKIMLRVYVREMKENLQVDSGRLDCLFPRLENLLDLHTHFLSCLRERRR
ENLVSPSDRNYTINRVADILIAQFSGEIGERMKNCYGDFCSHHTEAVSLYKEMLQNNRRF
QNLIRKISNLSIVRRLGVTECILLVTQRITKYPVLVERILHNTEANTEEHQDLTRALSLI
KDAIKEVDSLVNLHEKESRLRDIHSKMEPKTQGKIKDGRVFRREDLAQGRRWLLHEGTVS
WKAASGRLKDILAVLLSDVLLLLQEKDQRYVFATVDNKPSVISLQKLIVREVAHEEKAMF
LICASSNEPEMYEIHTASKEERNSWMTYIRQAVESCPHSEERLFSEEEEARAARLREFQE
RLSQRDSVIVQALAEKLQLFAEMAESVAGLEDTASRSKLLLRGDASDLQQGEVLLKGAIT
EVENLQNLLQAGVKEEAQATRAEDGSGSGVLPRRAGTFGGYDSSPVILSKNGSVKKSFSG
EFRNRDRSQRASSDPQLKGLCGSHTLEQTVDQSCSSPPRWNQIWSNSFPEAEFFDKVLML
SQRLYSLQAIVAQQDSQIELQKASLTERVSLPGRNKGNGLLEQEKQRTLALQREELAYLN
KLQSQHRQEQQRWEKERERHRQQVEATEAQLRQREEECRKLEEQLAKEKEELDRQRETYQ
KDLERLRESTRAVEKEKERLESQKKMKRKTIEVAPMSGSLNGDLISSSGLGSSSCVSELP
HSQKPVVRGSLSVAQADYPERPEVMLRRDTGSSTLPLPLKTEVPLHLFSTTNQQHKPVGV
QQQIPTKLAAINSGKGKGSKSGKASHRTDSSASVDMKQMLPLKLSARDDNVLKAKRSISP
HQLPLQSHSLHHHSDQLSPEQTGLDTQPTSSISFTQKPPMQGVQPHPPPSVHHLHSQSAD
SLPFQPHLQPHSLSQIAQANASLNVHGLSVTPPYGLPAEDLNKEDVIFF
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggctgactctcctcttaaccactcctggccgtctttctccaagctctggatgaagaga
tggtccttcaagagagcatccgagtgcaacccatgtagccagtcctgtgggaatcccagt
acccagctcagagtccagccacccagtgggaaaggatcttcctcctcattaccgccggcc
tccatcacagaggatgtattcagtgacaacaccagtgatgatcaggatgcatcctctgta
ctcagtgactacgactgtccctgtgtggacgcgggcagcagcctagaggacctgcagggt
ctcagttcctccctcagggactcggagtactttaaagacctgcagggagaattaccagcc
tcaaaggctgcagcgtcaaaagacacctctgcatttccagagagcaacacacagcaaact
gataacttacaggatcctgtaaacacaaacagtcagaccaaaaaccaacccacggctctg
accacagacttcccacaggtcaatgcaacatcatttccttcctttgaacaatttgcagat
caacctccctctgacgctgttgcccagctcagcccaaagccgctgccgggttgtgtcgcc
gacggcgatgacttcgctgcctctgcattcagcctcaactggacagttaatctaaatggg
ctgctggagtccttggaaacagtgaaagcggttgaagaactgaacgacgtaaaggaccag
ggcaaaatggagttggatggagagccagacatggacagctttccgattttggtcagatcc
atgtcaacgtctcggaggcacagctggggggttcctctgtcacccctcaactctggcagg
agactgagtctggacaccgcagccatagacagcgatgaagatggagacgatgatgacgaa
caacatagcagtcttttccagtcctcccagcagcagtctgacagcttctcagcaggagcc
ggagatgagccagatggtttcagtttgagggtcaccggtggatcaggcaggcatctgtac
tctcgatcggacatccttgccaccgatgaatattcccgagcggcacacatttcccgtgtc
gtgcagacctccaaacaggccgccagggcagcaggagtggcagaggagtttgacccagaa
gaaaacctgcactcatcagagggacaaagccacatgctgatggtacagaaagttctgcag
gagctaaagctgtactatggagcgaagcacagaaacaccagcagtccagactccaaggat
tcaggaagtgtcacttggtacgagttcctctccaatgcgaatgaggaagaggaagacaga
gcagagaaggctgagaaaggaacaaaggtgaaaaggaccctcagctccctgaggagcagg
gtgacgggctccttcaataaagataagggtaagaaccgaggaaaagagctgcagagggag
agagacagggaggagaaagagaaagtgtgcaggaccggcagcagcagcagcaacgggcat
cattttgtgccaggctccttctccagctccgccacctgctcgctgtgcagcaagagtttg
ctgaaaaagcatggaatgcagtgcatgaattgtgctgtgaacgttcacaagagctgcaag
tctctgctgggtgagtgcaccagcagcaagaataagagagattttcactcgaggggcagc
gggtcagcatctcctagccttgcgctgaaagacagggacagggagaaagatcaggcaggc
agagattcggctcaggctgcggatggccaccgagggtttcccggcgtcccaggcatgacc
gttagctcgtttggagccagcactcagccttcagccagcctcagcagcagcttctccgca
gcccctgcctgcagcgtcggccccagcctccgtcaccacagtagctccggatccctccct
ggggacatggatgagatagactctctgcgctctaaacgctgcaacgacgacgccgtttct
cttgcaccttccattgccgagtccatcatcgtagaagacgctcactatgcagcagtgcgg
gccgacctggagtctgatgctcaggacttggaggccgactcctggagcctcgcggttgat
cagcattatctgaagaaacattcaaaagacgtggcgaaaaggcaggatgttatttatgag
ctaatgcagacggagatgcaccatgtgaggacactcaagataatgctgcgtgtttacgtc
cgagagatgaaggagaacctgcaggtggactcgggcagactggactgccttttcccccgc
ctggaaaacctcctcgaccttcacacacatttcctgtcatgtctcagagagcgacggcga
gaaaaccttgtctcacccagcgacaggaactacactatcaatagagtggcagacatctta
atcgctcagttctcaggtgaaataggagagaggatgaaaaactgctatggagatttctgc
agccatcacactgaagcggtcagcttgtacaaagagatgctgcaaaacaatcgaaggttt
cagaacctcataaggaaaatcagcaacttatccattgtacggaggttaggagtgacggag
tgtattttgctggtaacgcagaggattaccaagtacccagtcctggtggagcgcatcctt
cacaacactgaagcgaacacagaggagcaccaagatctgactcgggctctgagtctgatc
aaagacgccatcaaagaggtggacagcctggttaacctgcatgagaaggagtctcgactc
cgagatattcacagcaagatggagccgaagacgcagggaaagataaaggatggccgggtg
tttcgtagggaggacctggctcagggaagacggtggctgctgcatgagggaactgtcagc
tggaaagctgcctctggcagactcaaagatatcctggctgttctgctgtcagatgtgctg
cttttacttcaagagaaggatcagagatacgtttttgctacagtagataacaagccttca
gtgatttctctccaaaagctgatagtcagggaggtggcccatgaggaaaaggccatgttt
ctcatttgcgcctcctcaaacgagccagagatgtacgaaatccacaccgcctccaaagag
gagcgaaactcttggatgacatacatacggcaagcagtcgagagctgccctcactcagag
gagagactgttcagcgaggaagaggaggctcgagctgcaaggcttcgagaatttcaagag
cgtctgagccagagggattcagtgatcgttcaggctctcgcagagaaactgcagctgttc
gcagagatggcggagtccgtggctggcctggaggacacggcttctcgctcaaagctgctg
ctccggggcgatgcctctgacctccagcagggggaggtgctgctcaaaggagccatcact
gaagtggagaacctgcagaacttgttgcaggctggcgtgaaggaagaggctcaggcaaca
cgggcggaggacgggagcggttctggggttctgcccaggagagcggggacttttggaggc
tatgacagcagtccggtcatcctctctaagaatggcagcgtgaagaagagcttctctggc
gagttcaggaacagagacaggagccaaagagccagttccgaccctcagctcaaaggcctc
tgtggaagccacaccttggaacagacggtggatcagagctgctcctctcctccaagatgg
aaccagatctggtccaactctttccccgaagctgagttctttgacaaagtgttgatgctt
tcccagagactttatagcctgcaggccattgtagcgcagcaggacagtcagattgagctg
cagaaggcctcgctaacagagcgtgtgtctctgcctgggcgcaacaaaggaaacgggctc
ttggagcaggagaagcagcggactttagccctgcagagagaggagctggcctacctgaac
aagcttcagtctcagcacaggcaggagcagcagcgctgggagaaagaacgggagcggcac
cggcagcaagtggaggcaaccgaggcccagctacgacaaagagaggaggagtgcagaaaa
ctagaggagcagctggctaaggagaaggaggaattggacaggcagagagagacgtatcag
aaggacttggagagactgcgggagtccactagagctgtggaaaaggaaaaggagcgactg
gagtcccagaagaagatgaaaaggaaaacaattgaggtggctccgatgtctggcagtctg
aacggggatctcatctcgtcctccggtctcggcagctcctcctgtgtctcagagttgccc
cactcccagaagcccgtggtgcggggaagcctctcggtggcgcaggccgactaccccgag
cggcctgaggtcatgctccggcgggacacgggctcctcgacgcttcctctcccgctgaag
acggaggtgccgctgcacctcttcagcaccaccaaccagcagcacaaaccggtcggggtg
cagcagcagatccccaccaaactggcagcgatcaacagcggcaaagggaaagggagcaaa
agtggaaaagcgtcacatcgcaccgacagctctgcctcggtggacatgaagcagatgctc
cccctgaaactgtctgctagagacgacaacgtcctgaaggccaaacgctccatcagcccc
catcagctgcccctccagtctcactccctgcatcaccactcggatcagctgagtccagag
cagactgggttagacacacagcccacctcctccatcagcttcacccagaagccccccatg
cagggcgtgcagccccatcctcccccctccgttcaccacctccactcccagagcgccgac
tccctcccgttccagccccacctgcagccgcacagcctcagccaaatcgcacaggccaac
gcctcgctgaacgttcacggcctcagtgtgacgccgccctacggcctccctgctgaggac
ctcaacaaggaggacgtcatatttttttaa
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integrated database retrieval system
