Gambusia affinis (western mosquitofish): 122838720
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Entry
122838720 CDS
T07758
Symbol
her6
Name
(RefSeq) hairy-related 6
KO
K06054
hairy and enhancer of split 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03460
Fanconi anemia pathway
gaf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122838720 (her6)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122838720 (her6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122838720 (her6)
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122838720 (her6)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
122838720 (her6)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
122838720 (her6)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
122838720
NCBI-ProteinID:
XP_043985556
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Position
LG10:17421595..17423449
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AA seq
277 aa
AA seq
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MPADMMEKSSSSPVAATPASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALNTDPSILGKYRAGFSECMNE
VTRFLSTCEGVNTEVRTRLLGHLASCMTQINAINYPSQHQHQHQLPPAAGSTHPSFAQSM
VQIPSSSPQVLPMNPASCKGGSPPASLPSDATKVYGGFQIVPATDGQFAFLIPNAAFAPN
GPVIPVYANNMSTPVPVPAAVSPGAPSANTDSVWRPW
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgatatgatggaaaaatcctcatcctctccggtcgctgcgacgccggcgagc
atgaacacaactcctgacaagcctaagacagcatctgaacacagaaagtcatcaaagccg
atcatggagaagaggagacgagccagaataaacgagagcttgggtcagctgaagactctc
attctggatgcgctcaaaaaagatagctccagacactccaaactggagaaggcagacatc
ctggagatgacagtgaagcacctccggaacctgcagagagctcagatgactgctgctctg
aacactgacccctccatattgggaaaatatcgcgcaggattcagtgaatgcatgaatgaa
gtcacccgattcctttccacctgcgagggcgtcaacaccgaagtcaggacgcggctcctg
ggccacctggccagctgcatgacgcagatcaacgccataaactaccccagccagcatcag
caccagcaccagctccctccagcagccgggtcgacgcacccctccttcgcccagtccatg
gttcagatccccagctcctccccgcaggtgctcccaatgaaccccgcgtcctgcaaaggg
ggctccccgccggccagcttaccgtcagacgcgaccaaagtgtacggcggcttccagatc
gtacctgccacagacggacagttcgctttcctcatacccaacgcggcatttgcgccgaac
ggccccgttatccccgtgtacgcaaacaacatgagcacgccggtgcctgttcctgccgcg
gtgtcccccggagccccatccgccaacacagactcagtgtggcgaccctggtga
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