Gambusia affinis (western mosquitofish): 122838790
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Entry
122838790 CDS
T07758
Symbol
chd1l
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122838790 (chd1l)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122838790 (chd1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
DEAD
LIG3_BRCT
AAA_34
Selenoprotein_S
BRCT_2
AAA_22
SWI2_SNF2
Protocadherin
Motif
Other DBs
NCBI-GeneID:
122838790
NCBI-ProteinID:
XP_043985670
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All DBs
Position
LG10:5471861..5488116
Genome browser
AA seq
1020 aa
AA seq
DB search
MSDILGKIRNTITEKKKTALSQSDLQTFGLRGIQLRAYQLDGVQWLTQSLKDQQGCILGD
EMGLGKTCQTISLLVYESGALGKKGPFLVLSPLSVMENWRKELESFAPSLTVLCYKGDKE
RRAEIQREKTAQDFQVLLTTYELCLKDASFLKRWRWEVLVVDEAHRLKNQNSLLHKTLTE
FSVGFRLLLTGTPIQNNLQELYSLLSFIEPSIFTPEEADNFVSSYSDVRSRPALASELQS
ILEPFLLRRVKSEVAFDLPKKTELVVYHGMSALQKKYYKAILMRDYDAFVNEQGSKNRLL
NILVNLRKCVNHPYLFDGVEPEPFQIGDHLIEASGKLCLLDSILAFLHKGGHRVLLFSQM
TRMLDILQDYMEYRGYSYERMDGSVRGEERNLAVKNFSSKDIFVFLLSTKAGGVGLNLTA
ADTVIFVDSDFNPQNDLQAAARCHRIGQNRPVKVIRLLARDTVEEIMYSRAVSKLQLTNT
VIEEGRFSLLDQAQSAAAGLQLSEILKFGVDKLLSSDESSIQEVRLEKILGPSQDGQWVD
DDDDDDDDGFSPLEEEVENESDSDEQNHMYFFEGKDYSKDPSSEDQRSFDRILEEQMAEF
QKAAGEGRALRRKAGSSLSVAFAIPARKRKPLTEAELELRRQRRQEAAAKRAKMMEDKKR
QEEEEKRRKKMAWWDSCGYKSLCLQLVDSEEEEEDEEEEEDDSSVCSTDSTSTDIRYVLG
DVTHPHTARGDAIIVHCVDDSGRWGRGGLFTALEVRSDEPRKQYESAGKMKDLELGNVLL
FPIDDKQSRLDGRDQLALIVAQKRDKANNLSGILLGALDEGLKKIYSAAKKNSASVHLPR
IGHSTKGFNWYGTERLIRKHLASRGVPTFIYYHSRAVKKTVSHQTPAASAAAHQAPLPST
DGPRDETGTEGPGPSALPRSSSPAELPSFMKGVRVFFYNIPASERKRLARYLITYDGDEE
DVMSEDVTHIVAEVENRIQMQELLDLVRENQQAVAVETAWLESCFSKQQQVKTAHFQHQL
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacatattggggaagataagaaacaccataaccgagaaaaagaagacggctctc
agtcagagcgacctgcagacctttggtttacgagggatacagctgagagcctaccagctg
gacggggtgcagtggctgacccagagcctcaaagaccagcagggctgcatcttaggggat
gagatgggtttgggtaaaacctgccagaccatctctctgctggtgtacgagtcaggagct
ctggggaagaaaggtccgtttctggtgctgagccccctgtctgtcatggagaactggaga
aaggaattggaaagctttgccccgtctctgacggtgctgtgctacaaaggagacaaagag
agacgggctgagattcagagggaaaaaaccgctcaggacttccaggttctgctcaccaca
tacgagctgtgcctcaaagatgcgtcgttcttgaaaaggtggaggtgggaggtgctcgtt
gtggacgaagctcaccggctgaagaaccaaaactctctgctgcacaaaaccttgacagag
ttttcagttggtttcagactcctgctcacagggactcccattcagaacaacctgcaggag
ctctactccctgctgagcttcattgagcccagcatcttcacaccggaagaggctgacaac
tttgtcagctcctactccgatgtgcgaagtcgacctgctctggcttcagagcttcaaagc
attttggagccttttctgctccgtagagtaaagtcggaggtggcttttgatctgcccaag
aagacagagctggtggtgtaccacggcatgtcagctttgcagaagaaatactacaaagcc
attctaatgcgggattatgacgcttttgtaaacgagcaaggcagcaagaacagactgctg
aacatcttggtgaatttgagaaagtgcgtcaaccacccatacctgtttgacggggtggaa
ccggagccctttcagatcggggatcacctcattgaagccagtggaaagctgtgcctgctg
gacagcatcctggcctttctacacaaagggggccaccgtgtcctgttgttctctcagatg
acgaggatgctggacatccttcaggactacatggagtacagaggctacagctacgaacgc
atggatgggtcggttcgaggcgaagagcgaaaccttgctgtgaagaacttcagcagcaaa
gatatctttgtgtttttgctcagcactaaagcaggcggagttggcctcaaccttacagct
gctgacactgttattttcgtggacagtgacttcaacccccaaaacgacctgcaggctgcg
gcgcgctgccatcggattggccagaacaggcctgtgaaagtgatccgcctccttgcgaga
gacaccgtggaggagatcatgtactctcgagccgtatccaagctgcagctcaccaacact
gttatcgaagagggccgcttctctttgctggatcaggcgcagtcagctgcggcgggtctg
cagctgagcgagatcttgaagttcggagtagataagcttttatcgtcggacgagagctcg
atacaggaagtcagactggagaagatactgggtccatcacaggatggtcagtgggtggat
gatgatgatgatgatgatgatgatggattctcaccactagaagaagaggtggagaacgag
tctgattctgatgagcagaatcacatgtacttctttgaggggaaagactacagtaaggac
ccgagctcagaggaccagaggagttttgaccggatcctggaagagcagatggccgagttt
cagaaagcggcaggagagggacgagctctgcggcgcaaagctggatcttcgctctcagtc
gcgtttgcgattccagcgaggaagaggaaacccctcactgaggcagagctggagctcagg
cggcagaggaggcaggaggctgcagccaagagagccaagatgatggaggacaaaaagagg
caggaggaagaggagaagcgcaggaaaaaaatggcctggtgggactcctgtggctataag
tcactttgcctgcagcttgtagacagtgaagaagaggaggaagacgaagaggaggaagag
gatgacagcagtgtatgctctacagactcaacctccacggatatccgctacgttctgggg
gatgttactcatccccacacagcgaggggagatgctatcatcgtccactgtgttgatgac
tcagggcggtggggcagaggaggcctgttcacggcgctggaggtgagatcagatgagcca
cgaaagcagtacgagtcggcagggaaaatgaaagatttggagctgggaaacgtgctcctc
ttccccatcgacgacaaacagtcgagactggacggccgagatcagttagccctgatagtg
gcacagaaaagagacaaagccaacaacctgtctgggatcctcctcggtgctttggacgaa
ggactgaagaagatttactctgcagctaagaaaaacagcgccagtgttcatcttcctcgc
atcggtcactccaccaaaggtttcaactggtacgggacggagcggctcatcagaaaacac
ctggcctccaggggcgttcccacgttcatatattatcacagcagagctgtcaagaaaaca
gtttctcatcagacacctgcagcatcagctgctgctcatcaagcacctttaccgagcaca
gacgggccaagggatgagacaggaaccgagggcccgggtccgtccgctctgccacgcagc
tccagccctgcggagctgcccagcttcatgaagggagtccgagtgtttttctacaacatt
cccgcttcagaacggaagaggttggcccgctaccttatcacgtatgacggagacgaggag
gacgtcatgagtgaagacgtcacgcacattgttgcagaggtggagaatcgcatccaaatg
caggagctgctggatctggtccgtgagaaccagcaggctgttgctgtggagacggcctgg
ctggagtcctgcttctccaaacaacaacaagtcaaaacggcacacttccaacatcagctc
tga
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integrated database retrieval system
