Gambusia affinis (western mosquitofish): 122838798
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Entry
122838798 CDS
T07758
Symbol
hps3
Name
(RefSeq) Hermansky-Pudlak syndrome 3 protein isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122838798 (hps3)
Membrane trafficking [BR:
gaf04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
122838798 (hps3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Motif
Other DBs
NCBI-GeneID:
122838798
NCBI-ProteinID:
XP_043985681
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All DBs
Position
LG10:complement(28000396..28020254)
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AA seq
1022 aa
AA seq
DB search
MVHVYNCHPFTSQQIVQVEQEPGLVCCGGGALFVVTTGGCKVEVYNLETEGCPLICRFAS
MGTVRRIQHSSIGDYLVTIEEKNSATYLRVYTNWRHQAEEKSRVGVRLLGHLLRGASVWG
GVQMEIIEIPLSEHPVSLACCAVTGDLLVGCENTLVLFALRRHTQQNLQNQQNLQSSWSN
SEQSCSRSPGQTSSQNQELSVLDFERSVILHLSKITPKQVALCGGYVAVQAELEVLVLKL
EATAEATGVEEPSDSFKSEDDPEEQSDFLLVPKHQELLGDRARACDVPVSVEQTGLEDRR
RYTLSYLLFRRFTPEFFQGCSVEEIQLHSLQLHPMSTSKQSASVDQPACMFCFFSLPTAG
YLYSLRGGVELLSTYQYPEKVLQAVLTDHLLHVITRNALQSFTVRCAAVAARVEDPYIDT
TMKACPPCSLEVCALRMQLFIGLRSLCVYGRHVVLLSTADTDAPEETERHTPRRGLSRRW
VISSPKETSPVGHGWNLYVVDTVPPITLHQEMVEYSQRYAETNPQGLSLRHLLSEAHLLL
RSSLLESSEQRQASEGVRKMAAQTYREELEEAFRQNSAQLGDSFSRGSQKDCHLALPYYR
MSGLSVTEVMSRNRPLPGSPHSYGPGFLFYLKNYLLEETDQSLSQEDADEVTRIFSQSEP
SMLVSVCASPCMMNVDPAATLQILQHLEETAGVSVPLTITMATMMLRLGNRAQYTELMER
HPEMQLVYGFIEEPRLLLHAGGGEGGKHLQVRPTALAGQLADSQPGLLVAAMVALHENNK
VQLEPADHVFKELGCESSLQLDFWEAMVMSSSQDAVIQELLFRLASVYIDRLTAGESPTK
HKSLKSADDLISCCSHYGALYPWLTVLNPAQTSSYQHQEALHKLQSLLCGPSLSIGNVAP
LLESLSEETLWGFSLHLLCATRRGQYASSIERLLDRCPQAIIAYANHQLQDKHMALWWQK
LLPELCNRTRAAADDGVLLGALTETLVVVAMETSPAEFLELLPDDGSASYFLPHLLTCGQ
RR
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atggtgcatgtctacaactgccatcctttcacttcacagcagattgtacaggtggagcag
gagcctggactcgtgtgctgtggaggcggagcgctgtttgttgtgacaacaggaggatgc
aaggtggaggtgtacaatttggaaacggagggctgccctctcatatgccgctttgctagc
atgggcacagtgaggaggatccagcacagctccatcggagactacttggtaaccatagag
gaaaaaaacagcgccacctatctgagagtttacacaaactggcggcaccaggcggaggag
aagtcgcgtgttggggtgcgtttattgggccacttgcttcgcggcgcgtctgtctggggc
ggagtgcagatggagatcattgagatcccgctgtcggagcatcccgtgtccctggcatgc
tgcgcggtgactggagacctcctggtgggctgcgagaacacgctggttcttttcgctttg
aggagacacacccagcagaacctgcagaaccagcagaacctccagagctcctggtccaac
tcagagcagagctgcagtcggagtccaggtcaaacttctagtcagaatcaggaactttct
gtgttggactttgaacgttcggtcatcctgcatctctccaaaatcactcctaaacaggtg
gcgctgtgtggaggttatgtggcagtccaggccgagcttgaagttctggttctgaaactg
gaagcgacggccgaggccacaggcgtagaagagccatcagattcctttaaaagcgaagat
gatccagaagagcagagcgacttcctgctggttccgaagcaccaggagctgctgggggac
cgagccagagcctgcgacgtccccgtcagcgtggagcagaccggactggaggaccggagg
cgctacacgctctcctaccttcttttcaggcgttttactccagagttctttcaaggctgc
agtgtggaggagattcagctccactcgctgcagctccaccccatgtccaccagtaagcag
tcggcgtctgtggaccaaccggcctgcatgttctgcttcttctctcttcccacggcggga
tacctctacagtctgaggggcggcgttgagctcctctccacctatcagtatccagagaag
gtgctgcaggcggtgctcacagatcacctgttgcacgtcataaccaggaatgcgctgcag
tcgtttacggtgcgttgtgccgcagtagcagccagggttgaagacccctacattgacacc
accatgaaggcttgtccaccgtgcagcctggaggtgtgtgcgctcagaatgcagttattt
attggtctgcggtcgctgtgtgtctacggccgccatgttgtcctcctctccactgctgac
acagacgcaccagaggaaacggaacgccacacaccgcgccggggcctgagcaggaggtgg
gtcatctcatcccccaaagaaaccagtcctgttggacacgggtggaatctgtatgttgtc
gacaccgtacctcccatcacgctccatcaggagatggttgagtacagccagcgctacgca
gagactaacccacagggcctgagtcttcgtcacctcctcagtgaagcccacctcctcctc
cgctcctccctgctggagtcgtcagagcagcggcaggccagcgaaggtgtcagaaagatg
gccgcccagacgtacagggaggagctggaggaggcgttcagacagaactccgcccagctt
ggagacagtttcagcaggggcagtcagaaggattgccacctggctttgccgtactacagg
atgtccggtctgtcggtcaccgaggtcatgtccagaaaccgtccactcccaggcagccct
cactcctatggacccggtttcctcttttatctgaagaactacctgttagaggaaacggac
cagagcctcagtcaggaggacgcagatgaggtcactagaattttcagccaatcagagccc
tcgatgctggtcagcgtgtgcgccagcccgtgcatgatgaacgtggacccggctgcaacg
ctgcaaattttacaacatctggaggaaacggctggcgtgtcggtgcctctgacaatcacc
atggcgaccatgatgctgcgcctgggcaacagggcgcagtacacagagctgatggagcga
caccctgagatgcagctggtgtacgggttcatcgaggagccgaggttgctgctgcacgca
ggaggaggagaaggagggaaacaccttcaggtgcgtccgacggcgttggccggccagctg
gctgactcccagcctggactcctggtggcggccatggtggctttacacgagaacaacaag
gtgcagctggagcccgctgatcacgtctttaaggagctgggatgtgagagcagcctgcag
ctggacttttgggaggcgatggtcatgtcgtcctcccaggatgccgtcattcaggagctt
ctgttccgactcgcttcggtttacatcgacagactgacggccggcgaatccccaacaaaa
cacaagtcgctgaaaagtgcggatgacctgatcagctgctgctctcattacggcgccctc
tacccgtggctcaccgtcctgaacccagctcagacttccagctaccaacaccaggaggcg
ctgcacaaactgcagtcgttgctctgcggtccgtccctctccatcggcaacgttgctcct
ctgttggagagtctgtcggaggaaacgctgtggggcttcagcctgcacctcctctgtgcc
accagaagggggcagtatgccagcagcattgagcggctgttggaccgctgtcctcaggcc
atcatagcctacgccaaccaccagctacaggacaaacacatggctctctggtggcagaag
cttcttcctgagctgtgcaaccggacgagagcggccgctgacgatggcgtcctgctcgga
gctctgacagagacgctggtggtggttgccatggagacgagcccggcagagttcctggag
ctcctgccagacgacggctcggcgtcgtacttcctgcctcacctgttgacgtgcggccag
agacgctga
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