Gambusia affinis (western mosquitofish): 122838840
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Entry
122838840 CDS
T07758
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03030
DNA replication
gaf03410
Base excision repair
gaf03420
Nucleotide excision repair
gaf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
122838840 (rfc4)
03410 Base excision repair
122838840 (rfc4)
03420 Nucleotide excision repair
122838840 (rfc4)
03430 Mismatch repair
122838840 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gaf03032
]
122838840 (rfc4)
03036 Chromosome and associated proteins [BR:
gaf03036
]
122838840 (rfc4)
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122838840 (rfc4)
DNA replication proteins [BR:
gaf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
122838840 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
122838840 (rfc4)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
122838840 (rfc4)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
122838840 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
122838840 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
AAA_16
AAA_22
AAA_30
AAA_11
DUF815
Mg_chelatase
AAA_24
AAA_19
SLFN-g3_helicase
AAA_14
RuvB_N
AAA_5
AAA_28
Cdc6_lid
wHTH-PRTase_assc
Gp44_lid
ResIII
AAA_7
AAA_3
Motif
Other DBs
NCBI-GeneID:
122838840
NCBI-ProteinID:
XP_043985767
LinkDB
All DBs
Position
LG10:2132564..2142799
Genome browser
AA seq
357 aa
AA seq
DB search
MQAFLKGATIQTSRPQKDKVTAGPSAEKKAKAVPWVEKYRPKCVDEVAFQDEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVIREKVKN
FAQLTVAGTRPDGKPCPPFKIIILDEADSMTAPAQAALRRTMEKESRSTRFCLICNYISR
IIEPLTSRCSKFRFKPLANQIQKERLLGICDKEKLKYTKESIAALVQLSEGDLRKAITFL
QSAARLNADKEITDQAIIEIAGVVPSKMIDNLLQICFKGTFEKLEVAVRNMVNEGYAATQ
ILSQLHDSILEKDITDKQKSAIFEKMAVVGKCLADGADEYLQMLSLCSVIMQQAGQS
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcaggccttcctgaaaggagcaactatccagaccagcagaccccagaaggataaggtg
acagcgggacccagcgctgagaagaaggcgaaggctgttccctgggtggagaaatacaga
cccaaatgtgttgatgaggtggccttccaggacgaggtggtcgcagtgctgaagaagtca
ctggaaggagcggatcttccaaacctcctcttctacggtcctcctggaacaggaaagact
tcaaccatcctagctgctgccagagaactttatgggcctgagctgtatcgacagagggtg
ctggagctgaatgcttcggatgaacgtggaatccaggttatcagggagaaagtgaagaac
tttgctcagctcactgtagctgggacgcgtccagacggaaagccatgtcctccttttaag
attatcatcctggacgaggcagattccatgactgccccagcccaagctgctctcaggcgg
accatggagaaagagtcccgctccactcgcttttgcctcatctgtaactacatcagcagg
attattgagcctcttacctccagatgttccaagtttcgtttcaaacctctggccaatcag
atccaaaaagaacgtctgctgggaatctgtgataaggagaagctcaagtacaccaaagag
agcatcgcagcgctggtgcagctgtctgagggggatctgaggaaagccattacgtttctt
cagagcgcagcgcgtctcaatgctgacaaggaaatcacagaccaagctataattgagata
gcgggggtcgttccttccaaaatgattgataatttgctccaaatctgctttaaaggaacg
tttgagaaactagaggttgcagtgaggaacatggtgaatgaaggatatgcagccacacag
atcctgagtcagctccatgactccatcttggaaaaggacattactgacaagcaaaagtca
gccatctttgaaaagatggcggttgtaggaaaatgccttgctgatggtgcagatgaatac
ctgcagatgctgagtttgtgttcagtgatcatgcaacaggctggtcagagctaa
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