Gambusia affinis (western mosquitofish): 122838998
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Entry
122838998 CDS
T07758
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-like isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122838998
04121 Ubiquitin system [BR:
gaf04121
]
122838998
Enzymes [BR:
gaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122838998
Membrane trafficking [BR:
gaf04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
122838998
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122838998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
Zn_ribbon_19
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-RING_16
zf-Nse
zinc_ribbon_16
C1_2
EHMT1-2_CRR
DUF7559
Motif
Other DBs
NCBI-GeneID:
122838998
NCBI-ProteinID:
XP_043986031
LinkDB
All DBs
Position
LG10:10012310..10018789
Genome browser
AA seq
320 aa
AA seq
DB search
MAEAPPCTSRFFCHRCSLEISPRLPEYMCPQCESGFIEELLEERSADNGSMSTMSSGPQN
QQPLENLDQHLSMFPSGFGQFSVSVFDDTFDLGPGLRTEDNRDAENQSERDMSSRQRYSA
RQSRSRHGSRRQAGRHDGAPTLEGIIQQLVNGIIGPPANIGVGAWGVLHSNPMDYAWGAN
GLDAIITQLLNQFENSGPPPADSDKIKSLPTVEITDEHVASGLECPVCKEDYSVGENVRQ
LPCNHMFHNDCIVPWLEQHDTCPVCRTSLTGLNTATNPPELSEMNFTSSPSSSSSSSSSS
TSSSPPSSDSTSNESSADNS
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagctcctccatgcacaagccggttcttctgtcacagatgctcactggagatt
agtcctcggcttcccgaatatatgtgtccacaatgtgagtctggatttattgaggagctg
ctggaagagagaagtgctgacaatgggtccatgtccaccatgtccagcggaccccagaac
caacaaccattggagaatcttgaccagcatttatctatgttcccctccggctttggtcag
ttttccgttagcgtctttgatgacacctttgaccttgggcctggactaaggacagaggac
aatcgggatgctgaaaaccagtcagaaagggacatgtcatctcggcagcgatatagtgcc
aggcagagtagaagtcgtcatggttcaagacggcaagcaggaaggcacgacggagctcct
actttagaaggtatcatccaacaacttgtgaatggaataattggacctcctgcaaatatt
ggtgttggggcctggggggttctccactccaatccaatggactatgcttggggtgctaat
ggacttgatgctatcataacacagttattaaaccagtttgagaactcgggtccaccgcct
gctgacagtgacaaaataaaaagtcttcctacagtggaaattaccgatgagcatgttgct
tcaggactggaatgtccagtgtgtaaagaagattacagtgttggagaaaacgtgcgacag
ctcccgtgcaatcacatgtttcacaatgattgcatagtcccctggctggaacagcacgac
acttgtccagtatgcaggacgagcttgactggactgaacacggcaacaaaccctccagaa
ctctcagagatgaactttacatcctccccttcctcctcatcctcatcctcctcctcctcc
acctcttcttcccctccgtcctcggattccaccagcaacgagagctccgctgataactcg
tag
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