Gambusia affinis (western mosquitofish): 122839024
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Entry
122839024 CDS
T07758
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122839024 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122839024 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
gaf04131
]
122839024 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
gaf03029
]
122839024 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gaf04812
]
122839024 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122839024 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
122839024 (si:dkey-110c1.10)
Membrane trafficking [BR:
gaf04131
]
Others
Actin-binding proteins
Myosins
122839024 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
gaf03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
122839024 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
gaf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
122839024 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_22
Myosin_N
AAA_16
Motif
Other DBs
NCBI-GeneID:
122839024
NCBI-ProteinID:
XP_043986100
LinkDB
All DBs
Position
LG10:complement(10642091..10660643)
Genome browser
AA seq
1667 aa
AA seq
DB search
MATLELYTKGAGVWVPDPEAVWVSATLLRDYKPGDEQLWLQLHNGNEVHYSVDSASDLPP
LGNPDILEGENDLTALSFLHEPAVLHNLRVRFLDYSSIYTYCGIVLVAINPYDQLSIYGE
EVIDAYSGQDMGDMEPHIFSVAEEAYCTMTREERNQSIIISGESGSGKTVSAKFTMRYFA
VVGGAAQQTSVEERVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFGRKGDIIGANMRT
YLLEKSRVVFQASSERNYHIFYQLCAARELPEMRSLKLEPPEYFHYTKQGGEMQIAGTDD
LSDLERTRNAFTVLGVQSEQQMELFRILSAVLHLGNVNIQASGRSADRSYINADDRSLAV
FSKLLGVEGSQTAHWLCSRRLAVGGEMLVKPMTGQQALEARDALAKHIYGQLFTWTVQRL
NSALRSQKGKTKSFIGVLDIYGFETFDQNSFEQFCINYANEKLQQQFNRHVFHLEQEEYV
REELAWNRIEFSDNQECINLIEGPLGIFDLLDEECRMPKGSDENWARKLYDQHLTSKPHP
HFGKPRMTNSAFIVFHFADTVQYECGGFLDKNRDTVFEELINILKASQSELVAELFQQRG
GAPSVANGSVRSGKRAAREHKLTVGFQFRQSLQMLMDTLNSTTPHYVRCIKPNDLKAAFM
FDPQRTVQQLRACGVLETIRISAAGYPSRWTYEEFFSRYRLLLRGPQSQDQAQASCRQAL
PQLIPDTDQYCFGKTKVFFRAGQVAVLERLRSERLRVAAVTIQRHAKGWLARIRYSRILW
AAATIQRYTRGALARRRALTLRYTKAAIVIQKTYRMVVVRQLFLMIRDATVTIQAFTRGT
LARRRYRQLIAERAAVLLQATVRGWLARRAYRRVRAAVVFMQCCVRRKASRRELLRLKAE
ARSVERYRELNKGMEVKLMQLQLRVDQQARESAALRETLHAEREAASAELEALRGIVQKL
ENQKLEKPPPSPAVSEKEVEGRRRAEEKAAQEILRLTQEMQALQKDKENISKEKENLTAQ
LHEKERSQNECIQKAVLEASAALQSELEEEKMKYQGLLKELTRLEQRYDNLREMNLLTER
SRGHRRTDSAQSLISEPLSPCSAPLSPQSLTPLSGSPFASAFPSPEEKRRISVTSPTPER
RISVWSSETPLDQLMEKTDVAKDPAVKKKGEDLEYAYDAVRVANKFLESQLQKQQAEWKD
ELEDLRNQLSQKICSGSSPAKKRDLWQLLEAREFECMRLRRELKELRHTATLRHLLTQVS
LSAPTTETLCAARPKPAAVAGLLECRKRDETKLLKNLITDLRSEGALALPPGLPASVIFL
CVRQADSSGDQARARSLCSAALVAMKAALKKQTSDLDMTALWLKNVALLHDLLIQYSPQQ
CLTRQSLDSDELVSMTTDLSDLTRSLSDLCIQAYQQLLSITETQLQKLIVPALLESETIA
GLSSSAAKLVISRKRAGSDPRPLGADAPTMASVLRQLGALHTALSRQALPQSLAEQAFRQ
MTYLICASALNNLLLRKDMCCWSRGMQIRYNLSVLEEWLRSRGLAAGGAVATLEPLIQAA
QLLQVGKKTDADAQAIVLTCTALSSKQIMKILTLYTPHSDLDEKVSLNFIRTVQELVKGR
SDSQPPQLLMDVRRAFPVTVPYSPPPALSADDLVIPDSLKISFLRRS
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atggcaactctggagctatacacaaagggggcaggtgtgtgggtgcctgacccagaagcg
gtttgggtctcagccactctcctgagggactacaaacctggagacgaacagctttggctg
caactccacaatggaaatgaggtccattactctgtagactccgcatccgatctccccccg
ctggggaatcccgacatcctggagggggagaacgacctgacggctctcagcttcctgcac
gagcctgctgtgctgcacaacctccgggtgcgcttcctggactacagcagcatctacaca
tactgtggtattgtgttggtagccataaatccctacgatcagctgtccatatatggtgag
gaggtgatagatgcttacagcggtcaggacatgggtgacatggagcctcacatcttctcc
gtggccgaggaagcatactgcaccatgaccagggaagagaggaatcagtccatcatcatc
agtggggagtctggctctggaaaaacggtttcagccaaattcaccatgcgatattttgct
gtggtcggaggagcggctcaacagaccagcgtggaggagagggtgctggcttcaaacccc
atcatggagtccatagggaatgctaaaaccacccggaatgacaacagcagccgcttcggg
aagtacatcgagatcggttttggtagaaagggggacatcatcggggcaaacatgcgcacc
tatctgctggagaagtcgagggttgtctttcaggcgtcgtcagagagaaactaccacata
ttctatcagctgtgtgcagccagagaactgcctgaaatgagatcactcaaactggagccg
cctgaatatttccactacaccaaacagggaggagagatgcagattgccggcacggacgat
ctgtcggacctggagcgaactcgcaatgctttcaccgtcctcggtgtgcagtctgagcag
caaatggagctcttcaggatcctgtcggctgttctgcacctgggaaacgtcaacattcaa
gccagcggcagaagcgccgacaggagttacatcaacgcagacgaccgctctctggccgtc
ttctccaagctgttgggagtcgagggttctcagacggctcactggctgtgcagccgcagg
ctggcggtggggggagagatgctggtgaagcccatgactggtcagcaggctctagaagcc
agagacgcgcttgccaagcatatctacggtcagctgttcacgtggacggtccagcggctc
aactcggccctgcgatcgcagaaggggaagaccaaatctttcataggagtgttggatatc
tacgggtttgagacttttgaccagaacagctttgagcagttctgtataaattatgcaaat
gaaaaacttcagcagcagtttaacaggcacgtcttccatttggagcaggaggagtacgtc
agagaggagttggcttggaacaggatcgaattcagcgacaaccaggagtgcatcaacctc
atcgaaggccctctgggaatatttgatctgttggacgaagagtgccggatgccgaaggga
tcggatgagaactgggcccgaaagctgtacgaccaacacctgaccagcaagccccaccct
cacttcgggaagcccaggatgacaaacagcgccttcattgttttccactttgctgacacg
gtgcaatatgaatgcggcggctttctagacaagaaccgagacacggtgtttgaggagctc
atcaacattctcaaagcaagtcagtctgagctggtggctgagctgttccagcagcgggga
ggcgctccctctgtggccaatgggagcgttcgctcaggaaaaagagccgccagagaacac
aagctgactgtaggcttccagtttcgtcagtccttacagatgttgatggacaccctgaac
agcaccactcctcactatgtgcgttgtattaaaccaaacgacctaaaagcagcttttatg
tttgacccacagcggactgtgcagcagctgagagcttgtggggttctggaaaccattcgc
atcagtgcagccggttatccatccagatggacgtatgaggagttcttcagcaggtatcgt
cttctccttcggggaccccagagccaggatcaggctcaggcctcgtgcagacaggctctg
cctcagctcatcccagacaccgaccagtactgcttcggaaagaccaaagtgtttttccgg
gcgggtcaggtggccgtgctggagaggctgaggtctgagcggctgcgtgtcgctgctgtg
accatccagcgccacgccaaaggctggttggctcggatcaggtacagcaggatcctctgg
gcggctgctaccatccagagatacaccagaggagctctggccagacggcgggcgctgact
ctgcgctacacaaaggctgccatagtgatccagaagacgtaccggatggtggtggtcagg
cagcttttcctcatgattcgagacgccaccgtcaccatccaggccttcaccagggggact
ctggcccgccgcagatacagacagctgatagcggagcgggcggccgtgctgctccaggcg
acggtgcgcggctggctggcgaggcgggcgtaccggcgggtgcgcgccgcggtcgtattc
atgcagtgctgcgttcgccgcaaggcaagcaggagggagctgctgaggctgaaggccgag
gcccgctctgtggagcgctacagggagctcaacaagggaatggaggtcaagctgatgcag
ctgcagctcagagtcgaccaacaggcgagggagagcgctgctctgagagagactctccac
gcggagcgagaggctgccagcgccgagctggaggctctgagggggatcgtccagaaactg
gagaaccagaaactggaaaagccgccgccttccccggcggtcagtgagaaggaggtggag
ggaaggaggagagcggaggagaaagccgctcaggagatccttcgactcacacaggagatg
caagcgttacagaaagacaaggagaacatcagcaaggagaaggaaaatctcaccgctcag
ctccacgagaaagagagatcacaaaacgagtgtatacaaaaggccgtgctagaggccagc
gcagctctgcagtcagagctggaggaggagaagatgaagtaccagggtctcctgaaagag
ctcaccagactggagcagagatacgacaacctgagggagatgaatctgctcaccgagcgc
tccagaggacacagaaggaccgactcggctcagagtctgatctccgagcctctctctccg
tgctcggctccgctgtcgccccagtctctcacgccgctctcggggtccccgttcgcttcg
gcgttcccgtcgccggaggagaagcgcaggatcagcgtgacgtcccccacgccggagagg
agaatctcggtgtggagctcggagacgccgctggatcagttgatggagaagacggacgtg
gccaaagacccggcagtgaagaagaaaggagaagacctggagtacgcttatgatgccgta
cgagtggccaacaagtttctggagagccagctgcagaagcagcaggccgagtggaaggac
gaactcgaggatctgaggaaccagctcagtcagaagatctgttctggttcctctcctgca
aagaaacgggatttgtggcagctgctggaagcccgagagtttgagtgcatgaggctgcgg
agggagctgaaggagctgaggcacacggcgactctcaggcatctgctgacgcaagtttcc
ctgtcggctccaaccacagagacgctctgtgctgctcggccgaaaccggcagccgtcgcc
ggtttgctggagtgcaggaagagagacgaaaccaaactcctcaagaacctcatcacagac
ctccgctctgaaggcgcgctggctctgcctcccggtttgccggccagcgtgatcttcctc
tgcgtccgtcaggccgacagcagtggagaccaggctcgcgctcgctcgctctgcagcgcc
gccctcgtcgccatgaaggccgctctcaagaagcaaacctctgatcttgacatgacggct
ctgtggctgaaaaatgttgctcttttgcacgacctgttgatccagtattctccacaacag
tgtctgactcgtcagagcctggactcggatgagctcgtttctatgacgaccgacctgagc
gacttgacccgctctctgagtgacctttgcatccaggcctaccagcagctgctctccatc
accgagacgcagctgcagaaactcatcgtcccggccctcctggagagcgagaccatcgcc
ggtctgtccagctcggcggcgaagctggttatctccaggaagcgggcgggctcagaccct
cggccgctcggcgccgacgctcccaccatggcgtcggtgctgaggcagctcggagcgctt
cacaccgcactgagccgccaggctctgccccagagtctggcggagcaagctttccgccag
atgacctacctcatctgtgcctccgcgctcaacaacctgctgctgaggaaagacatgtgc
tgctggagccgtggcatgcaaatacgttacaatctcagtgtgctggaagaatggttgcgc
agccgaggcctggcagcagggggcgctgtggccacattggagccgctcatccaggcagct
cagttgctgcaggtgggaaaaaagactgatgcggatgctcaggccatagtcctgacctgc
actgctctctccagcaagcagattatgaagatcctgactctctacactcctcacagtgat
cttgatgaaaaagtctctctaaattttattcgcaccgtccaggagctcgtcaaaggccgc
tctgacagtcagcctccacagctcctcatggacgtgaggagagcgttccctgtcactgtt
ccctactcgccgcccccggccctcagcgcagacgacttggtcatcccagactccctcaag
atatcttttctacgcagatcctag
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integrated database retrieval system
