Gambusia affinis (western mosquitofish): 122839036
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Entry
122839036 CDS
T07758
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122839036 (lingo3a)
Membrane trafficking [BR:
gaf04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
122839036 (lingo3a)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
LRR_14
ig
Ig_2
LRR_9
V-set
LRRNT
LRR_RPS2
Cupin_1
LRR_6
Motif
Other DBs
NCBI-GeneID:
122839036
NCBI-ProteinID:
XP_043986151
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Position
LG10:complement(10921747..10965432)
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AA seq
608 aa
AA seq
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MGVGLGVCWLLPFLFLLLMITVSSTQSQGCPQRCDCIVKLKTVSCFGKRLSSLPEGIPPD
TKVLDLSGNKLRWIEQDDLLPYTRLEKLELSDNMISVLEPNAFSSLQNLQSLSLRGNQLK
LVPMGAFSRLSNLTSLDLSGNKIVILLDFTFQDLKSLKNLEVGDNDLVYISNKAFMGLVG
LKELTIERCNLTSVSSQSLSYLHNLVTLRLRYLSISSLDDQNFRKLGNLRGLEIDHWPFL
EYISPHSLQGLNLSWLSITHTNITSVPTSALRSLAHLTSLNLSHNPITVLESWGLRDLIR
LKELHLVNTNLAVVQPYALGGLRQIRLLNLSTNSLVTLEEGAFQSVNTLETLRLDRNPLA
CDCRLLWILQRRKTLNFDGASPVCMTPVEVQGRALSAFTDSALFDHFTCQKPKIRNRKLQ
QMSAREGQVVSFICRAEGEPTPVIFWISPQRRRITTKSSGRLTVLPEGTLEIRYAQVTDS
GTYICIASNAGGNDTYFATLTVSGLPLDAALMANRTYYAGDLNDTNLNDTRVFLKFTLDL
KTILISTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPATSGGQGGA
RKFNMKMI
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgggggttggcctgggtgtgtgttggctgctgcctttcctcttcttgctgcttatgatc
acagtgtcctccacccaaagtcaaggatgtccccagcgttgtgactgcattgtgaagctg
aagactgtgtcctgttttggtaaacgtctgtcctccttgccggagggaatcccgcctgac
accaaagttttggacctaagtgggaataaacttcgctggatagaacaggatgatctgctt
ccatatacacgcctggagaagctggaactcagtgataacatgatcagcgttctggagcca
aatgcgttttcaagtcttcagaacttgcagtcactttcactgaggggtaaccagctaaaa
ctggttcccatgggagctttctcgcgtctctccaacctcacctccttagatttgagtgga
aataagattgtaattcttttggacttcactttccaagacctaaaaagtcttaagaacctg
gaggttggtgacaatgatctggtttacatttctaacaaggcttttatgggattagtagga
ctcaaggagctgacaattgagagatgcaacttgacgtcagtgtccagccaatcgttatcc
tatctgcacaacctggtgactctgcgactcaggtatcttagcatctcctccttagacgac
cagaactttcgaaaacttggaaaccttagaggtctggagattgatcattggccctttttg
gaatatatctcccctcatagccttcaaggccttaatttgtcttggctatccattactcac
accaacatcacctctgtgcccacctctgcccttcgtagtttggctcacctcactagcctc
aacctctcacataatccaatcactgtgttagagtcctggggtctgcgggatctcatcaga
ctgaaggagctgcatctggtgaacactaacctggcagtagttcagccttatgcactaggt
ggtctgaggcaaatccgccttcttaatctttcaaccaacagcttagtgaccttggaagag
ggagcttttcagtctgtcaacactcttgagacgctgcgcttggatagaaaccctcttgcc
tgtgactgccgcctcctctggatccttcagcgtaggaagacccttaattttgatggtgcc
tcccctgtgtgtatgacccctgttgaagtccaaggccgggctcttagtgctttcaccgac
tcagctctttttgaccactttacttgccagaaacctaaaattcgcaacagaaaactgcag
caaatgtcagcccgcgaagggcaagtagtgtcgtttatctgcagagcagaaggcgagccg
acgcccgtgatattctggatttctcctcagcgtcgacgcataaccacaaagagcagtggg
cgactgactgtgttaccggagggcactctagaaatacgctacgcccaggtaactgatagt
ggaacctacatctgcattgctagcaatgctggcggaaatgacacctactttgctacactc
acagtcagtgggctaccactggatgcagcactaatggccaaccgcacctattatgccggg
gacctgaacgacacaaatctgaatgacaccagggtgttcttgaagttcacccttgacctc
aagaccattctaatatctacagctatgggctgtatcatgtttctgggagtggtcttattc
tgcttcatcctgctatttgtgtggagtcggggtagaggacagcacaagaacaacttctcg
gttgagtattctttcagaaaagtggatggaccagcaaccagcggaggacaggggggggca
cgaaagttcaacatgaaaatgatttga
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