Gambusia affinis (western mosquitofish): 122839071
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Entry
122839071 CDS
T07758
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gaf03009
]
122839071 (ddx10)
Enzymes [BR:
gaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
122839071 (ddx10)
Ribosome biogenesis [BR:
gaf03009
]
Eukaryotic type
90S particles
Helicases
122839071 (ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
122839071
NCBI-ProteinID:
XP_043986265
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All DBs
Position
LG10:102234..105899
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AA seq
810 aa
AA seq
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MKEKNKSSRRKKPKTAQIRGSADPVKCFEKWKNKYMKGRNRVKQRRIQKKKPEWQLEREY
IESLVNRYGDINTTDVCRFSDFPISKKTLLGLQEAQYRQPTEIQRQTIGFALRGRDVLGA
AKTGSGKTLAFLVPVLECLYRQQWSSMDGLGVLIISPTRELAYQTFEVLRKVGKNHEFSA
GLVIGGKDLKSESERISRTNIVICTPGRLLQHMDETASFHASSLHMLVLDEADRILDMGF
ADTLNAILDNLPKSRQTLLFSATQTRSVKDLARLSLKDPEFVWVHEKAKFSTPATLEQSF
VVCELHHKVNMLYSFIRSHLKKKIIVFFACCKEVQYLFRAFCRLRPGITILALHGKQQQM
KRVEVYNNFVKKQSAVLFATDIAARGLDFPAVNWVLQFDCPEDADTYIHRVGRTARYKEG
GEALLLLLPSEEKAMLDQLQEKKVPINQIQVNPEKVHSVQQKLEAFLAQEMEQKERAQRC
FVSYLRSVYLMKNKQVFDIFQLPIRQYALSLGLAVCPRVRFLSKAQAQKAENEDEEQPDE
EEELQSFKVQLSNKVPCEVVEHDTEENVDKSSKALHGDISEDEDDLRDLELLTVKRKDVF
ELSGHPECVEDTSQGPNNTRKESKFKKTKKLLKKNFQINTKITFNEEGEAVQLWPPVQQA
VTAEDEEDDVLGINVAKARDRLRREDQEFDKQEYRRKVQAEHRNKRLKAREARREASKRQ
RMSDEENVAYLACHSGGEFDSSILPDPDQLHSSEEEEEGSAKQEHSCNEEPLAVTRKKGK
QLNDEHTGLDTGLSLAEDEELVLHLLRGPK
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaaaaacaagagttccagaagaaagaaaccaaaaaccgctcagataagaggg
agcgccgacccagtaaaatgctttgagaagtggaagaacaagtacatgaagggaagaaac
cgtgtgaaacaacggagaatacagaagaaaaaacccgagtggcaactagaaagggagtac
atcgaaagtctggtgaatagatatggtgacatcaacacgacggacgtttgtaggttttcg
gactttccgatctcgaagaagaccctgttgggtctacaggaggctcagtatcgccagccc
acagaaatccagagacagacgatcggcttcgctctgcgtggcagagatgtccttggtgct
gcgaagactggttccggaaaaactttagccttcctcgttccggtgcttgaatgtctttat
cgtcagcagtggagctcaatggacggtctcggtgtcctcatcatatcaccaaccagagaa
ctcgcctatcaaaccttcgaagtcctccgcaaagtaggcaaaaatcacgagttttccgca
gggctcgttatcgggggtaaggaccttaagagcgagtcagagcggatatcccgcaccaac
attgtgatatgcaccccggggcggctgctgcaacacatggacgagacagcctccttccat
gctagcagcttgcacatgcttgtcctcgacgaggcggaccgcatcctcgacatgggcttt
gcagacacgctcaatgccatactggataacctgcccaagtcacgacagacccttttgttt
tccgccacacagaccaggagtgtgaaagatctggcccgtcttagtctcaaggatccagag
tttgtgtgggttcatgagaaagccaagttcagcacgccggccaccttggagcagagtttc
gtggtgtgtgagttgcaccacaaagtgaacatgctctattcctttattagaagccacctg
aagaagaagattattgtgttctttgcctgctgcaaagaagttcagtatctgtttcgagct
ttctgtcgtctaagacctgggattaccatcctggcgctgcatggcaagcagcagcaaatg
aagagggtggaggtctacaacaattttgtcaagaagcagagtgctgtcctatttgccaca
gatattgctgcgagaggcctggacttccctgctgtcaattgggtgctgcagtttgactgc
ccagaggacgcagacacctacatccacagggtaggccgcacagctcggtacaaggagggt
ggagaggctctgctgctcttgctcccctctgaagagaaagccatgctggaccagctgcag
gagaagaaggttccaatcaatcagatccaagtgaatccagaaaaagtgcacagtgtacag
cagaagctggaggccttcctggcccaggagatggagcagaaagaaagagcccagaggtgt
tttgtttcttacctgcgctcagtctatctcatgaaaaacaaacaagtctttgacatcttt
cagctgccgattaggcagtatgctctgtctctgggccttgctgtttgccctagggtgcgc
ttcctcagtaaagcccaggcacagaaagcagagaatgaggatgaggagcagcctgatgaa
gaggaagaactccagagctttaaggttcagctgagtaacaaggtgccctgtgaagttgtt
gaacacgacactgaagaaaatgtggataagtcctcaaaagcacttcatggagacattagt
gaagatgaagatgatcttcgggacttagaactgctgactgtcaaaagaaaggatgtcttt
gagctgtcggggcacccagagtgtgtggaggacacttcccaaggcccaaataacaccaga
aaagaatcaaagttcaaaaagaccaaaaagctcctaaagaaaaacttccaaatcaatacc
aaaattacttttaacgaagaaggagaagctgtgcagctttggcccccagtgcagcaagcg
gtaactgctgaggatgaggaagacgatgttttaggcatcaatgtggcaaaggccagagac
aggcttaggcgtgaagaccaggagtttgacaagcaagagtacagacgcaaggttcaagct
gaacacagaaataagaggctcaaggccagagaggccaggagggaggcaagtaagcggcaa
cgaatgtctgatgaggaaaatgtagcatacttggcctgtcacagcgggggcgagtttgac
tccagcatcttgccagaccccgatcagttgcactcatcagaagaagaggaggagggtagt
gctaaacaagaacacagctgcaacgaggagcctttagcagtgacaagaaagaaaggaaag
cagctgaatgatgagcatactggcctggacactggcctttcactggctgaagatgaggag
ctggttttacatctgctgcgtggaccaaagtag
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