Gambusia affinis (western mosquitofish): 122839091
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Entry
122839091 CDS
T07758
Symbol
abca7
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf02010
ABC transporters
gaf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122839091 (abca7)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
122839091 (abca7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gaf02000
]
122839091 (abca7)
Transporters [BR:
gaf02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
122839091 (abca7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
122839091
NCBI-ProteinID:
XP_043986335
LinkDB
All DBs
Position
LG10:complement(22157375..22193660)
Genome browser
AA seq
2354 aa
AA seq
DB search
MGFFRQLYLLLWKNVTYRRRNKIQLLIELLWPLFLFVILISVRHSHPPYKQGQCHFPNKA
LPSVGTVPWIQSIVCNVNNPCFHSPTAGETPGQVGNFDNSILSRLFVDAQTVLSYSGNRS
FSNFQDLMESVRLLGERFGSLPSLPVKEYLRPNETFSSFLLTNANLSSSTVDQLMNARLN
FQAVLTGVQMPLKVLVCNATLLGELLSVDGGAANMAALQKELCQLPAGVLRDAERLFLSQ
LDVTKFLTRDRLIGSADELRIVSQAISSVSQELAVLIDDLSSLSSFAEMNAALSLLSPEN
RTALPRESFRAFSRIMCGHPKNGGERIPSLNWYEDNNIQSFLGRNGTEDVVLDTDNNTTP
FCKSLIQTLESNPLSRIVWRGIKPLFIGKLLYTPDTPVVRQVMKEVNKTFEDLQILQDLN
DAWMEVGPEIKNYMETSVEIQLLKDLLRRPEIAVLVNMRLENTTWTASRIVRFLSTPSPD
TPRKPGAPPTWLDVYNNIGNTVGTLSQVSKCFSLDKLEGLHSEGQLITRALELLEDRQFW
AGVVFLLPNTSSPQLPPHVTYKIRMDIDDVTKTNKIKDRFWDPGPAADPFDDMRYIWGGF
VYIQDLVERAVNYVLTGVKQTTGIYIQQMPYPCYVDDVFLRVLNRSLPLFMTLAWIYSVA
MIIKGVVYEKEARLKETMRIMGLSTGTLWLSWFISSVVPFLISAVLLIGLLKWGDILPYS
DPTVVFFFLMAFATATIMQCFLISTFFSKANLAAACGGLIYFSLYLPYVLCVAWRDHLTS
THRVLASFLSPVAFGFGCEYFSQYEEQGVGIQWFNLRASPVEGDTYSFTTSISMLYVDAF
IYAIAAWYIEAVFPGQYGIPRPWYFIFQLNYWGGIPLEAGMPIPPAPTNQDEDHIEAEPN
NMNLGVNIRNLVKIYKKGGKIAVNHLNLKFFEGQITSFLGHNGAGKTTTISVLTGLFPPT
SGTVYVKGMDIRYDLDIIRKTLGVCPQHNVLFDMLTVEEHVWFYGCLKGLPEEKVMAEMG
ALLEDVGLLHKRHDQTKNLSGGMQRKLSVAIAFVGGSKVVVLDEPTAGVDPYSRRGIWDL
LLKYREDRTIILSTHYMDEAELLGDRIAIISKGKLCCCGSPLFLKSKLGSGYYLTVVKRE
ELSTSTPSYSSICTSASTSTNKLPPLLKDSESSLSEDTGLGSEDTSSYMAALLALVQQHV
PGARLVEESRREAVINLPQAAAKDGSLGIFLSKLDQRLPELGISSYGLSDSTLEEIFLRV
AEETGVDADPASEQPAEEPSGPQPSEQKAEEPEPEPKETDPLSEDGRGGMPLTGWWLTWQ
QLRALFVKRWLYARRSRRGLFAQIVLPAVFVLIALLFSLIVPPFGKYPALELQPWMYGDQ
YTFFSNDDPGNPAIENLLEALLDQPGFGTKCMQREEPDDNKTNPQCGPERRGLFMRPQMS
FSTWQMLSQGNWTRDRPSPECQCSTEDTRRMLPDCPDGAGGIPPPQMKRATGDVLQNLTR
YNITDYLVKTYPQILKKSLKTKKWVNEFRYGGFSLGGTSSQNISQVQHLQDSIMAIRTRY
QVEQNSSLDQLLKKLPGFLGEMHTVNNVKVWYNNKGWHAMVSFVNVMNNGLLRASLPPGP
ERRRHGITVYNHPLNLTKEQLTEIAMMTTSVDVLVSICVIFAMSFVPASFVLFLIEERVS
KAKHLQFVSGVKPILYWLANFAWDMLNYSVPAMIVVLIFISFQQQSYVSDTNLPALILLL
LLYGWSITPLMYPASFVFSVPSTAYVVLTSINLFIGINGSIATFVLELFVDKHLNEVNRI
LKKVFLIFPHFCLGRGLIDMAKNQALADAFQRLGSKPTLDPFQWDFVGKNLFAMAAEGVI
FFIFTILLQYKFFIHFRPWWNDPQLPPLGPEDEDVARERVRVKSGKAHSDILTMIDLSKV
YKAGKKPAVNRLCLGIPRSECFGLLGVNGAGKTSTFRMLTGDTPITHGEAFLNQHSVQME
MERVHQLMGYCPQFDAISDLLTGREHLELYARLRGVPEDSVSKVAQWGVKKLGLTQYAEQ
EAGGYSGGNKRKLSTAISLIGAPPVIFLDEPTTGMDPKAKRFLWNCILSVTKEGRAVVLT
SHSMEECEALCTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLADTKPDAESCPIDAY
MRTSFPSIELKERHQSILQYQLPSHACCLARVFDVLANNYEELGVVDFSVSQTTLDQVFV
NFAKEQTDDDCLTDVMIGNGAAQLNLPARINAPAVKPQLPPTPPQLRKSPQRPAKSPSCD
PKETKPKKAKARKVSSNGETSGGVPMSGPEAGSSNGGLQRESSKPHRSRHREESSSKDPA
ALFIVGSNSQESSL
NT seq
7065 nt
NT seq
+upstream
nt +downstream
nt
atggggtttttcaggcagctctacctcctcctctggaaaaatgtcacctaccgcaggagg
aataagatccagctgttgatcgagctcctctggccgctcttcctctttgtcatcctcatc
tctgttcgtcattcacaccctccttacaaacaaggccaatgccacttcccgaacaaggct
ttgccgtcggtaggcaccgttccctggattcaaagcatcgtctgcaacgtcaacaacccc
tgcttccacagccccacggcgggggaaacgccgggccaagtgggaaacttcgacaactcc
atactgtctcgtctttttgtggatgctcagacggttttgtcctacagtggaaatcggagc
ttctccaattttcaggacctgatggaaagcgtccggctcctgggagaaagatttggatcg
ttgccaagtctccctgttaaagaatacctgagacccaatgagacgttctccagttttctt
ctaaccaatgcaaacctgtcgtcttcaactgtggaccagctgatgaacgctcgccttaat
tttcaggctgttctgactggagtccagatgccgctgaaagtcttggtgtgcaatgcaacc
ctgctgggagagctgctgtctgtggacggaggagcagccaacatggcggctcttcagaaa
gagctttgtcagcttcctgctggtgtcctgcgtgacgctgagcgccttttcctctctcag
ctggacgtgaccaagttccttacaagagaccgtctaattggcagcgccgatgagctcagg
atcgtcagtcaggccatcagctccgtttcccaggagctcgctgtcctcatagatgatttg
tcctccctttccagttttgcagaaatgaacgcagctcttagtcttctgtctcctgaaaac
cgcacagctctgcccagagaaagcttcagagctttttcaaggatcatgtgcggccatccc
aaaaatggcggtgaacgcatcccgtcgctcaactggtatgaagacaacaatatccagtcg
ttcttaggcagaaacggcacggaggacgtggtcctggacaccgacaacaacacaacacct
ttttgcaaaagtttgattcaaacactggagtcgaatcctctttctcgcatcgtatggcga
ggaattaaacctctgttcatcggaaaactgttgtacacaccggacactcctgtagttcga
caagtcatgaaagaggtgaacaaaacatttgaagacctccagattcttcaggatctgaat
gatgcctggatggaggtgggaccagaaatcaagaactacatggagaccagtgtggagatt
cagctgctgaaggatttgctgaggcgtccagaaattgcggtcttggtgaacatgcgtttg
gaaaacacaacgtggacggcgtcacggatcgttcgtttcctgtccacgccgtcaccggac
acgccgaggaaacctggagcacctccgacctggctggacgtctacaacaacattggaaac
accgtcggcacactttcacaagtctccaagtgtttcagtttggacaagctggaggggctg
cactcggagggccagctgatcaccagagctctggagctgctggaggacagacagttttgg
gcaggtgtggttttcctgttgcccaacacgtcctcgccgcagctcccgccccacgtcacc
tacaagattcgaatggacatcgatgatgtgaccaagaccaataagattaaagacaggttt
tgggatccgggaccagctgccgatccgttcgacgacatgcgctacatttggggcggtttt
gtctacatacaagacctggtagagagagctgtgaattatgtcctaactggagttaaacag
accaccggcatctacatccagcagatgccatatccctgttatgtggacgatgtcttcctt
cgagtgctgaaccgctccctacctctcttcatgactctggcgtggatctactcggtggcc
atgatcattaaaggcgtggtgtatgagaaggaggcccggctgaaggaaaccatgaggatt
atgggtctcagcacaggaacgctgtggctcagctggttcatcagcagcgtcgtcccattc
ctgatttctgctgtgctgcttattggtctccttaagtggggggatattttgccttacagc
gaccccactgtcgtcttttttttcctcatggcgtttgccaccgctaccatcatgcagtgt
ttcctcatcagcacctttttctccaaagccaacctggctgctgcctgtggagggctcatc
tacttcagcctctacctgccctatgttctgtgtgtcgcctggagagatcacctcacgtcc
acacacagggtcttagctagtttcctgtctcctgtggcctttggttttggctgtgagtat
ttctctcagtacgaggagcaaggcgtggggatccagtggttcaacctgagggccagccct
gtggaaggagacacgtacagcttcaccacctccatctctatgctttacgtggacgccttc
atctacgctattgcagcctggtacattgaagcagtgtttcctggtcagtatggcatcccc
aggccctggtacttcatctttcagctcaactactggggtgggattcctttagaagcaggc
atgccaatccctccagctcccaccaaccaggatgaagatcacattgaagcagaacccaac
aatatgaatcttggcgtgaacatcagaaatttagtgaaaatctacaagaagggagggaag
attgctgtcaaccatctaaatctgaagttttttgagggacagatcacctccttcctcggc
cacaacggagccggcaaaaccaccaccatatccgtcctaactgggctgttccctcccacc
tctgggacggtctacgtgaaaggcatggacatccgctacgacctggacatcatccggaag
acgctgggagtttgtccacagcacaatgtcctctttgacatgctcacagtggaggagcat
gtgtggttttatggctgtctgaagggtttgcctgaagaaaaggtgatggctgaaatgggc
gctttgttggaggacgtcggcctcctgcacaagcgtcatgatcagaccaaaaacctctct
ggtggaatgcagaggaagctttctgtcgcgatcgcttttgttggcggctccaaagtggtc
gtcctggatgagcccacggctggcgtcgacccgtactcccgcagagggatctgggatctg
ctgctcaaatatcgcgaagatcgaaccatcattctgtccactcactacatggatgaggcg
gagctgcttggtgaccggatcgccatcatctccaaggggaaactctgctgctgtggatcg
ccgctctttctcaaatccaagctgggatctggttactacctgaccgtggtgaagagggag
gagctaagcaccagcactcccagttattccagtatctgcaccagtgccagcaccagcacc
aacaagctacctcctttactaaaggacagtgagtcgtcactcagtgaagacaccggactg
ggaagtgaggacaccagttcctacatggcagctttgctggcactggtccagcagcatgtt
cctggcgcgaggttagtggaggagtctagaagagaagccgtgatcaacctgccgcaagca
gccgccaaggacggcagtctgggtatcttcctctccaaactggaccagaggcttccagag
ctgggcatcagcagctacggcctgtcagatagcaccctggaggagatctttcttcgagtg
gcagaggaaaccggagtggatgctgatccagcatcggagcagccagcagaagagcccagt
ggcccgcagccatcagagcaaaaagctgaggaaccagaaccagaaccaaaggagacggac
ccactgagtgaagatgggcgaggcgggatgcccctgactggctggtggctgacatggcag
cagctccgagcgctgttcgtcaaacgctggctgtacgctcgacggagccgcagggggctc
ttcgctcagattgttctgccggctgtgtttgtgctgatcgctctgctcttcagcctcatt
gttcctccgtttgggaagtaccccgccctggagctgcagccctggatgtacggagatcag
tacaccttcttcagcaacgacgatcctggcaacccagccatagagaacctgctggaggct
ctgctggaccagccaggttttggcacaaagtgcatgcagagagaagagccggacgacaac
aaaacgaatcctcagtgtggacctgagaggaggggcctattcatgcggcctcagatgtcg
ttctccacctggcagatgctgagccaaggcaactggaccagagacagaccttccccagaa
tgtcagtgcagcacagaggacacccgccggatgcttccagattgcccggatggcgccggt
gggattcctcctccacagatgaagagagccactggggatgttctccagaatctgacgagg
tataacatcacagattacctggtgaagacctacccgcaaatcctcaagaaaagcctaaaa
accaagaagtgggtaaacgagttcagatatggaggcttctctctcggaggcaccagcagc
cagaatatctctcaggttcagcatctgcaagactccatcatggcaatcaggactcgatat
caagtagaacagaacagctcactggatcagctgctgaagaagctgccggggttcttggga
gaaatgcacaccgtaaacaacgtcaaggtgtggtacaacaacaagggctggcacgccatg
gtgtcgtttgtgaacgtgatgaacaacgggctgctgagagccagtctgccgcccggaccg
gagcggaggagacacggcatcaccgtttataatcacccgctcaacctcaccaaggagcaa
cttactgaaatagcaatgatgacgacctcagtggacgttctggtttccatctgtgtaatt
ttcgccatgtcctttgtgccggccagttttgttctcttcctgattgaggagcgagtcagt
aaagccaaacatttgcagtttgtcagcggagtcaaaccaatcctctactggctggccaac
ttcgcctgggacatgttgaactattctgtcccggccatgatagttgtgctgatcttcatc
agtttccagcagcagtcctacgtctccgacaccaacctgccggctctgatcctcctgctg
ctcctctacgggtggtctatcactcctctgatgtacccagcatcctttgttttctccgtt
ccaagcacggcttatgttgttctgacttccatcaacctcttcatcggcatcaatgggagc
atcgccaccttcgtcctggagttgtttgtagataagcatctgaacgaggtcaacaggatc
ttaaagaaagtgtttttgattttcccacatttctgcctgggtcgaggtctcatcgacatg
gctaagaaccaagccctggccgacgccttccagagactgggaagcaaaccgactcttgac
ccttttcagtgggactttgttgggaagaatctgtttgcgatggcagctgaaggtgtcatc
ttcttcatcttcaccatacttctgcagtacaagtttttcattcacttcaggccgtggtgg
aacgatcctcagcttcctcctcttggtccagaggatgaagatgtagcgagagaacgtgtg
cgagtgaaaagtggcaaagcccattctgatatcctcaccatgattgatctaagcaaggtt
tataaagctggaaaaaagccagctgtgaatcgactttgcctcgggattccccgcagtgag
tgtttcggcctgcttggtgtgaacggagcagggaagacgtccacgtttcgcatgctgacc
ggagacacaccgatcacacacggagaggctttcctcaaccagcacagtgtgcagatggag
atggagcgcgtccaccagctgatgggttactgtccgcagtttgatgccatcagtgacctg
ctgacgggtcgggagcatctggagctctacgctcggctcaggggggtgccagaggattct
gttagcaaagtggcgcagtggggggtgaagaagctggggttgactcagtacgcagaacag
gaggctggaggatacagcggaggcaacaagaggaaactttccactgcaatctccctgatc
ggagcgcctcctgttatattcctggatgagcccaccactgggatggacccaaaggccaaa
agatttttgtggaactgcatcttgagtgtcacaaaagaaggcagagctgttgtcctcact
tctcacagtatggaggagtgtgaggctctttgcaccaggatggccatcatggtgaacggc
agatttcagtgtctgggatccgtgcagcacctgaagaaccgattcggagacggatacact
atcattctccgtctggcggacaccaaaccggacgccgagtcctgtcccatcgacgcctac
atgaggacgtcgtttcccagcattgagctgaaggagagacaccagagcatcctgcagtac
cagctgccatctcacgcctgctgcctggcccgcgtctttgacgttctggccaacaactac
gaggagctcggcgtcgtggacttctccgtctcccagaccaccctggatcaggtgtttgtc
aactttgcgaaggagcagactgatgacgactgcctcactgacgtgatgattggtaacggc
gcggcgcagctaaaccttcccgccagaataaatgcccccgccgtcaaaccccaactaccc
ccaacaccacctcagctgaggaaatccccacagcgtcctgccaaatcacccagctgtgat
ccgaaggaaaccaagccgaaaaaggccaaagccagaaaggtcagttcaaacggggagacg
agcggcggcgtgcccatgagcggtcctgaggcgggcagcagcaatggaggacttcagagg
gagtccagcaaacctcacaggtcgagacacagagaggagagctccagcaaagatccggct
gcgctcttcatagtcggcagcaactcacaggaaagctcgctgtga
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integrated database retrieval system
