Gambusia affinis (western mosquitofish): 122839162
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Entry
122839162 CDS
T07758
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122839162 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gaf03009
]
122839162 (rexo1)
Ribosome biogenesis [BR:
gaf03009
]
Eukaryotic type
Pre-60S particles
RNases
122839162 (rexo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Motif
Other DBs
NCBI-GeneID:
122839162
NCBI-ProteinID:
XP_043986489
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All DBs
Position
LG10:complement(23845747..23861418)
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AA seq
1237 aa
AA seq
DB search
MLRSTGFFRGIDCPFYADYIDGKGSRNGCNRPYCHFRHSRQSRPSYGDVKKLQSGHKDQG
YDPFNPDVVRPQEQQNGQPAPSGDLSGALEMVNKAIEEVRGEVEREQRKLSRIGDEPYSP
TEKTGSSSSDVAKSQAAASHLAYDPGSYQITSGGYDPTPSCSKYTLDSDSQKYNSSSMEY
VPTSLKKPQSRTKVPYPPQSPKYLNTASSAKCKYTLDNSRPSTDMEYDPLSNYSAGIAVK
NKRDEGSHPVKTDYKKAYQLDASDKEDDTPGKKPQQASIDLKKYTISDSDGESSGTEYRP
TSLSNLQQRKANIVSARDALGKDTKDRSKSIKGALTQRNKEELAQDLDSQENTKQKENLE
KKKLPDQSGHGKISKPEKTQNIDKEVKKSSGVKSSSGSSSSAKDKLSCKNFKQDSAKKEN
KNQKDNSKNMLKMKDKVQREGRDEKRCESKSKMVEKLKRALSEQDKDARERKKLKPSERE
KDQSKNKDSQHRNGKLDSSRREKDVKKSKSSSSSCKGSLAKAKQSASSSKEKFEDKSLSL
SHADLFGDESPEEADPMEADYDDEPEEVLVRKSADALKRGLLSKRKASVRTPSSSEDEAD
GEPERSKSSWEEPDDVRVDFSMFQDDLDFDSDPMEECLRIFNESNDVKKEDKGRQAKQTS
RDSEEERSTDSTLTTLFPGQKKRVSHFVAKGDTDAPLKTAVRPYKRPTPQEVCFQRMQLA
QQQAAQLSASVKAASQSSTSSFAGEKKRIAHRPNPQITSTKTTGPAHGKPAASETPQGVK
SQTTVGILSKTSSTVAQKRTAHTPTMKSSSMRRPVIPTEFGAKVPTNIRQRYLNTFIDEC
VKFCPSEDVAFQTALDEEKLVYERSSSKNIYLNVAVNTLKKLRGKSSSCSLPVKKDSGLA
VKRKALSHEEVLGGRLAATTSFTVNRSGKQQEEKLSGASLYRKLQAYLMTEEQLQEHGYP
RLNPEASGKAVIHNQPERKICPDPFGRICCRCGAEYKVSVNGSCVRREECSYHWGRLRRH
RVAGGWETTYSCCSAAVGAPGCQIAKQHVQDGRKESLDGFVSTFSKPLPPDGNGGVFALD
CEMCYTKQGLELTRVTVIDSEMKVVYDTFVKPDSKVVDYNTRFSGVTEEDLVNATITLRD
VQAVLLSMFRAESILIGHSLESDLLALKLIHSSVVDTAIVFPHRLGLPYKRALKTLMADY
LKRIIQDNVEGHDSSEDASACMELMIWKIKEDAKVKR
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atgttaaggtccaccggcttcttccgagggattgactgtccgttttacgcggactatatc
gacggcaaaggcagtagaaatgggtgtaacagaccgtactgtcacttcagacacagccgg
cagagtcggccgtcctacggagacgttaaaaagctgcagtctggacataaagaccagggt
tacgatcccttcaatccagacgtagtgagacctcaagagcagcagaatgggcagcctgct
ccttctggggacctcagcggcgccttggagatggtcaacaaagccatcgaggaagtccgt
ggcgaggtggagcgagaacagcggaagctctctcgcatcggagacgaaccttacagtccc
actgagaagaccggttcgtcttcatccgacgtcgctaaaagccaagcagcggcctcgcac
ctggcttacgaccctgggagctatcagatcacatcgggaggatatgatcccactccgagc
tgcagcaagtacaccttggattcagacagtcagaagtacaacagcagctctatggaatat
gtccccacttccctgaaaaagcctcagtctcggacaaaagtcccctatcctccccagagc
cccaagtatctgaacactgcatcctctgcaaagtgcaaatacactctggacaactctagg
ccgtctacagatatggagtatgaccctctgtccaactactctgcagggatcgcagtgaaa
aacaagagagacgagggttcacatccagttaagactgactataagaaggcatatcagctg
gatgcttcagataaggaggatgatacacctggaaaaaagccacagcaggcaagtatagac
ttaaaaaagtacaccatctccgactctgatggggagagctctggaacagagtaccgaccc
acatcgcttagcaatctccagcaaagaaaggccaacattgtgtcggccagagacgctttg
gggaaagatacaaaagacaggagtaaaagtataaagggcgctcttacacagaggaacaag
gaggagcttgcacaggacttagactcacaggaaaataccaaacaaaaggagaacttggag
aaaaagaaactgccagatcaaagtggtcatggaaaaattagcaaaccggagaaaacgcaa
aatattgataaagaagtaaagaaatcatctggtgttaaaagtagcagtggtagcagcagt
agtgcaaaagacaaattatcatgtaaaaactttaagcaagactctgcaaagaaggagaac
aaaaatcagaaagataatagtaaaaacatgctaaagatgaaggataaagttcaaagagaa
ggcagggatgaaaagagatgtgagagtaaaagcaagatggtggagaaacttaagagagcc
ttaagtgaacaagacaaagatgcacgagaaagaaaaaaactgaaaccatcagagcgtgag
aaagaccaaagcaagaataaagacagccagcacagaaacggtaaactggacagcagtaga
agagaaaaggacgttaagaaaagtaaaagcagctccagcagctgcaaggggagcttggct
aaagcaaagcaaagcgccagctcgtcaaaagagaaattcgaagacaagagtctgagtctg
agccacgcagatctgttcggagacgagagccccgaggaggccgacccgatggaggcggac
tacgacgacgagccggaggaagtcctggtcaggaaatcagccgacgcgttaaagagggga
cttctgagcaagaggaaggcttcagtgaggacgccatcttcctctgaggatgaggccgac
ggggaaccggaacgcagcaagtcgagctgggaggagcctgacgacgtccgagtcgacttc
tccatgtttcaggacgatctggattttgactcggatccgatggaggagtgtttgcggatc
ttcaacgaatccaacgatgtgaagaaggaggacaagggacggcaagcaaagcagacttcc
agggattcagaggaggagagaagcacagatagcactttaaccacactcttccccggccaa
aagaagagagtgtcccatttcgttgccaaaggagataccgatgcacctttgaagacagcg
gtccggccgtacaagcggcccactccgcaggaggtctgcttccagcgtatgcagctggcg
cagcagcaagccgcccaactttcagcatcagtcaaagccgcctcacagagctcgacctcc
agctttgccggagagaagaagagaatcgctcaccggcccaatcctcagataacctccacc
aagacgacaggtccagcacatggaaaaccagctgccagtgagactccccagggggtgaag
agccaaaccacagttggcattctgtccaaaacctcgtctacggtggcgcagaagaggacg
gcacacacacccaccatgaagagctcctccatgaggcgtccggtcatccccactgagttc
ggggcgaaagttcccaccaacatccgccagcgctacctcaacacgttcatagacgaatgt
gtcaagttttgcccttcggaggatgttgcatttcagacggcccttgatgaggagaagctg
gtgtacgagcgcagtagcagtaaaaacatctacctcaacgttgccgtcaacacgctgaag
aagcttcggggcaaaagcagttcgtgttcattgcctgtcaaaaaggattctgggcttgca
gttaagcgaaaggcgctgtcccacgaggaggttctgggaggtcgtcttgcagccacaacc
agcttcactgtcaaccggtcgggcaaacagcaggaggagaaactctccggtgccagcctg
tacaggaagctgcaggcgtacctgatgacagaggagcagctgcaggagcacggatacccg
cggctaaaccccgaggcctctggcaaggccgtcatccacaaccagccagagagaaagatc
tgcccagacccgttcggtaggatatgctgccgctgcggcgccgagtataaggtcagcgtc
aacggcagctgcgtccgcagagaggagtgcagctatcactgggggcgcttacgcaggcac
agagtcgccggcggctgggagacgacgtacagctgctgctcggctgccgtcggagctcct
ggatgccagatagcaaagcaacacgtgcaggacggccgtaaagagtccctggacggcttc
gtgtcgacgttcagcaaaccgctgccaccggacggaaacggcggagtgttcgctttggat
tgtgagatgtgctacactaagcagggcctggagctgaccagggtcaccgtcatcgactcc
gagatgaaggtcgtctacgacacgtttgtgaagcccgacagcaaagtggtcgactacaac
acacgattctcaggcgtcaccgaggaagacttggtgaacgccaccatcaccctgagagac
gttcaggcggttctgctcagcatgttcagggcggagtccatcctcatcggacacagtctg
gagagcgacctgctcgcactcaagctcatccacagctcagttgtagacacagccatcgtt
tttcctcaccgcctcggtctgccctacaaacgtgccttgaagaccctgatggccgattac
ctcaaacgcatcatccaggacaacgtggagggccacgactccagtgaggacgcatcagcc
tgcatggagctgatgatatggaagattaaagaggacgcaaaggtcaagagatga
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