Gambusia affinis (western mosquitofish): 122839185
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Entry
122839185 CDS
T07758
Symbol
fxr1
Name
(RefSeq) fragile X mental retardation syndrome-related protein 1 isoform X1
KO
K15516
fragile X mental retardation protein
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122839185 (fxr1)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122839185 (fxr1)
Factors involved in mRNA localization
Other mRNA localization factors
122839185 (fxr1)
mRNA cycle factors
Stress granule specific factors
122839185 (fxr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
FXR_C1
KH_9
Tudor_FRX1
Agenet
KH_1
FXR_C3
KH-I_KHDC4-BBP
Tudor_2
Motif
Other DBs
NCBI-GeneID:
122839185
NCBI-ProteinID:
XP_043986525
LinkDB
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Position
LG10:complement(27907607..27925677)
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AA seq
724 aa
AA seq
DB search
MEELAVEVRGSNGAYYKGFVKDIHDDSLTIAFENNWQPERQVPFSDVRLPPPADAKKEIG
EGEEVEILSRANDQEPCGWWLAKVRMMKGDFYVIEYAACDATYNEIVTFDRLRPVNPNKA
VTKNSFHKCTVSVPQDLQEACQNDNAHKDFKKAVGACRVSFCPESSELLIMSTSESTVKR
VSLLSDMHLRSLRTKLLLMSRNQEATKHLETSRQLVSSFQQEFTVRTDLMGLAIGSHGNN
IQQARKLPGVTAIELDEETGTFRIYGETEEAVKKARSFLEFVEDSVQVPRNLVGKVIGKN
GKVIQEMVDKSGVVRVRIEGDNDNKQPRQELTQGMVPFTFVGTKESIGNVQVLLEYHISY
LNAMVELLVESQQLEEELKQIVDYAQGSSLARFSVNRTRRSGCSVDEVEQLRLERMQIDE
QLRQITQGHRPVDRERGERGERGGGGYNADNGANASSASMRGSRSYNSRGRGRRGHSYNT
GYSANSEHSNPSETDSERKDELSDWSLAGEDLDGERERGPRPQRDGRRRPGPGRGRGGGR
GRGRGGYGYNSGSRDHENNPPYGSLETNTETDQTADTDASESNLPANRRRRSRRRRTDED
ATLIDGMSESDNASVSENGTDLSEAKPQRRNRSRRRRMRLPEERQPVTVADYISRAESQS
RQMTAKDTKKNKEVGQAEVIAEHSPPAAPATTNGSNDDVSDVTAPNVSSYKRDSNPQPVM
NGLS
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggaagaactggcggtggaggtccgtggctccaacggcgcttattacaagggctttgtc
aaagatatccacgatgactctctcaccattgcctttgagaacaactggcagccagaacgc
caggtgcccttcagtgacgtcaggttgcctccacctgcggatgccaagaaggagatcgga
gaaggagaagaggtggagattctctccagagccaacgaccaggagccttgtggatggtgg
ctggccaaagtccgcatgatgaagggagacttctacgtcatcgagtacgccgcttgtgac
gccacctacaacgagatcgtaacattcgaccgtttgcggccggtcaaccccaacaaggcc
gttaccaagaactcctttcacaagtgcactgtctccgttcctcaggatctacaggaagcc
tgccagaacgacaacgcacacaaggatttcaagaaagcagtgggagcctgtcgagtttcg
ttctgcccagagagcagcgagctgctgatcatgtccaccagtgagtcgacagtgaagcgc
gtctctctgctgagcgacatgcacctgcgcagcctgagaaccaagctgctgctgatgtca
cgcaaccaggaagccaccaagcacctggagacctccaggcagctggtgtcgtccttccag
caggagttcacggtgaggacggacctgatgggcctggccatcggtagccatggcaacaac
atccagcaagccaggaagctcccaggggtcaccgccatcgagttggacgaagagaccggg
accttcaggatttatggagagacggaggaagctgtaaagaaggccagaagcttcctggag
tttgtggaggattcagtccaggtgccaaggaatcttgttggcaaagtgattggtaagaat
gggaaggtgatccaggagatggtggataagtctggcgtggtccgggtccgaatagaagga
gacaacgacaacaagcaacccagacaggaattgacacagggaatggtccccttcaccttt
gtcggtactaaggagagtatcggcaacgttcaggtcctgttggagtatcacatctcctac
ctgaacgccatggtggagctgcttgtggagagccagcagctagaggaagagctgaagcaa
attgtggattatgctcagggaagcagcctagccagattcagtgtaaacaggacaaggcgt
tctggatgcagtgtagatgaggttgagcagcttcgtctggagcggatgcagatcgatgag
cagttgcgtcagatcacccaaggtcaccggccggtcgatcgggagcggggcgagcgagga
gagagaggcggcgggggatataacgcagacaacggcgccaacgcgtcgtcggcctcgatg
cgcggcagccgctcctacaacagcagggggcgtggccggagaggccacagctacaacact
ggatacagcgccaattcggagcattcgaatccctctgagactgattcagagcgtaaagac
gagctcagtgattggtcgctggcaggagaggacctggacggggagagagagagaggccct
cgcccacagagagatggccgccggaggcccggacccggccggggccgaggaggaggaaga
ggcagaggaagaggaggatacggatacaactccggctccagggatcacgagaacaatccc
ccctacggaagcctggagacgaacacggagacggaccagacggccgacacggacgccagc
gagtccaacctgcccgccaaccgccgccgtcgctcccggcgacgcagaacggacgaggac
gccaccctgatagacggcatgagcgagtccgacaacgcctccgtcagcgaaaatggaaca
gatttgtccgaagcaaaacctcagcgtcgcaatcgcagccgccgccgccgcatgcgcctg
cctgaggagaggcagccagtgactgtggccgactacatatccagggctgaatctcagagc
agacagatgaccgccaaggataccaagaaaaacaaggaagtgggtcaggcggaggtcatt
gctgagcacagcccgccggcggctccggcaaccaccaacggctccaacgacgacgtgtcc
gacgttaccgcccccaacgtctcctcctacaagagggactcgaacccacaacccgtcatg
aacggactctcctag
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integrated database retrieval system
