KEGG   Gambusia affinis (western mosquitofish): 122839191
Entry
122839191         CDS       T07758                                 
Symbol
kdm4b
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
gaf  Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gaf03036]
    122839191 (kdm4b)
Enzymes [BR:gaf01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     122839191 (kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     122839191 (kdm4b)
Chromosome and associated proteins [BR:gaf03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    122839191 (kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H JmjN PHD_2 PHD DUF4537
Other DBs
NCBI-GeneID: 122839191
NCBI-ProteinID: XP_043986540
LinkDB
Position
LG10:complement(19571964..19622328)
AA seq 1229 aa
MDTDESMETVSAPNPATTAPPDPGLVSFPALGSSPAPDHVPIQEPATSETPSIPVTSEQH
TAPDITPVLPVDLDGTSKPVLGVEPSALQQVGPGPPPLPPAAAKNPSCKIMTFRPTMEEF
KDFAQYIVYMESQGAHRAGLAKVIPPEGWKPRQSYDTIEDMVIPAPIMQVVTGQSGLFTQ
YNIQKKSMTVGEYRKLANSKKYCTPRHKDFDDLERKYWKNLTFVSPIYGADVSGSIYDEG
IHEWNIGHLNTLLDMVEQECGIVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGQ
SKSWYSVPPEHGKRLERLAQGFFPGSSQGCDAFLRHKMTLISPSILKKYGIPFDRITQNE
GEFMITFPYGYHAGFNHGFNCAESTNFATLRWVDYGKNATLCSCRKDMVKISMDVFVRCL
QPSRYELWKQGKDITVLDHLKATELSSPELESWRQHRITYRQNLLQKAMHKMKQVRRLKL
EEVKVLAEEGIELNAAEYQRQVEEREAQRKQEREERLAREAMLALEAMEREEQKAAEAAA
KAANSPVKALHTPLAEEQELDIKPPNVMEDIEKKKLKKQKRMSNIQGPISGFEEAFEQFA
KSSNRNVDIMSIKNEDMNMEINTAQQLTFNKMKMPKEVKKSRRHPLSKPPMRSPLSIVKQ
DPTTEKELSSQMPMDSSMKKQEHLWRNHSPNFLAEKSFNAAVAGLEPYCAVCSLFCSYVK
PNRDVISLTPETSLPRHGNSTRPLVPEMCFSVGAVNTEPPPTNYHIGEDGTSLLIQCKCC
AMQVHASCYGLKPESVRDSWTCARCTTESWVVECCLCNLRGGALKMTTDNRWAHVICAIG
VPEARFVNAIDREPVDVSAVPDTRKSLKCVFCHTTNPSPNRGACIQCTHENCATSFHVTC
AQIAGVMMKPADWPYVVSVTCHKHKKGLQTVNKPRAAPKPAPQGLDLGLKVIGRKSDSWY
YHCTIIGIATQTFYEVNFEEGSYCDNVHPENLVSHDCLRNGSPGAGELIVVSTPDGESLN
ASFVKEHVHKLYQVEFQDQSQLMLKQSEIFQLDHELPKRVRARLALPTPQEEVRPADEAQ
AAKRRRLPSSSAGPNTPVPLSAPAQQNHSITTQPTVEPPSMTLTTNQEAPTPVSSVQTDT
ETPMDTVDNLAERPPVSNPPLTQQPIPFQATLNSDPFLSAPSSSSPPPPPPPPPQHMADS
YTPSSGYVSYMETLLHSHFPQDEAPGPVY
NT seq 3690 nt   +upstreamnt  +downstreamnt
atggataccgacgagtccatggagacggtgtcggctccgaaccctgctaccactgcaccc
cctgatcctggactggtctcttttcctgctctcggctccagtccagctccagatcatgtt
cccatccaggagccagcaacatctgaaacacccagtatcccagtgacctcagagcaacac
acagctccagatatcaccccagttctgcctgtggacctagatgggacttccaaacccgtt
ctaggtgttgagccatctgcactccagcaggtcggaccaggtccaccacctcttccccca
gctgctgccaagaaccccagctgtaagatcatgactttcaggcctaccatggaggagttt
aaagactttgcccaatatattgtgtacatggagagtcaaggagctcatcgtgccggactg
gcaaaggtgattcctccagagggctggaaacctcgccagtcctacgatactattgaagac
atggtgatcccagcccccatcatgcaggtggtaactggtcagtctggtctgtttacccaa
tacaacattcagaagaaatccatgactgtgggtgaatatcgcaagctggccaacagcaag
aaatactgcaccccacgccacaaagactttgatgacctggagaggaagtactggaagaac
ctgacgtttgtgtcacccatttatggggctgatgtcagtggctcaatctatgatgagggc
attcatgagtggaacattggtcacctcaacactctgctggacatggtggagcaggagtgc
ggtattgtcattgaaggagtcaacacaccgtacctgtattttggcatgtggaagaccacc
tttgcctggcacactgaggacatggacctctacagcatcaactaccttcactttgggcag
tcaaagtcctggtacagtgttcctcctgagcatggcaagagactggagaggcttgcacaa
ggtttcttccctggcagctcccaaggctgcgacgccttcctccgtcacaagatgacactg
atatctccatccatcctgaagaaatatggcattccctttgacaggataactcagaacgaa
ggggagtttatgattacatttccatacggctaccacgctggcttcaaccatggcttcaac
tgtgctgagtccacaaactttgcaactctacgttgggttgactatggaaagaacgccaca
ctgtgttcctgccggaaggacatggtgaaaatctcaatggatgtgtttgttcgctgcctg
caaccaagtcgctacgagctatggaaacaaggcaaagacatcacagtgttggatcatctg
aaggctacagagttgtccagtcctgaactggagagctggaggcagcacaggatcacctac
cggcaaaacctgctgcagaaagcaatgcacaagatgaagcaggtccggcgtcttaagctt
gaggaggtgaaggtgctggcggaagagggaattgagctaaatgcagctgagtatcagcgt
caggtggaagagcgcgaggctcagcgcaaacaggagagggaagagcgtttagccagggaa
gccatgttggccttggaggccatggaacgtgaggaacagaaggctgctgaggccgctgca
aaggcagcaaacagtcctgtgaaagcattgcacaccccattagcagaagagcaagaactt
gatatcaagccaccaaacgtcatggaggacattgagaagaagaagctgaaaaagcagaag
aggatgtcaaacattcaagggcccatatctggatttgaagaagcatttgagcagtttgct
aaatcttccaataggaacgtggatataatgtcaattaagaacgaagacatgaacatggaa
ataaacactgctcagcagctgaccttcaataagatgaaaatgccaaaggaggtgaagaaa
agtcggcgccatcctcttagtaaaccacccatgcgctcgcctctgtccatcgtcaaacaa
gacccgaccactgagaaagagctgtcctctcaaatgccgatggatagcagcatgaagaag
caggaacacttatggcggaatcactcaccaaactttttggctgagaagtccttcaatgct
gccgtggccggacttgaaccatactgtgctgtctgttcacttttctgttcctatgtgaag
ccaaacagagatgttatcagtttgacccctgaaacctccctacctcgacatggtaattca
actcgaccactggtcccagagatgtgcttcagtgtaggagcagtcaacacagaaccacca
cccacaaattaccatatcggggaagatggaaccagtcttttgatccagtgtaaatgttgc
gccatgcaagttcatgccagttgttacggtttgaagccagagtctgtcagggattcctgg
acctgcgccaggtgtacaacagagtcctgggtagtggaatgctgcctctgcaacctgcgt
ggaggagcattgaagatgacaacagacaacagatgggcccatgtcatctgtgccatcggt
gttccagaagctcgctttgtcaacgctattgacagggagccggtggatgtcagtgctgtc
ccagatacccgcaagagtttgaaatgtgtattttgccacacaacaaaccccagtccgaac
cgcggcgcctgcatccagtgcacacatgagaactgcgccacctcttttcatgtcacatgc
gcccagattgcgggagtgatgatgaagcccgcagactggccctacgtggtgtcagtcacc
tgccacaaacataaaaagggcctccagacggtgaataagcctcgggcagcccctaaacct
gctcctcagggtctagacctgggcctcaaggttattgggcgcaaatccgacagttggtac
taccactgcaccatcattggcattgcaacgcagacgttctacgaggtcaactttgaagaa
gggtcatactgtgacaacgtgcacccagagaatctagtgagtcacgactgtctgcgtaac
ggttctcctggtgcaggggagctgattgtggtcagtacaccggatggtgaaagcctaaat
gcttcctttgtcaaagagcatgtccacaagctctaccaggtggagtttcaggatcaaagt
cagctgatgctcaaacagtcagagatcttccagctggatcatgaattacctaaaagagtt
agagctcgactggctttgcctacaccacaggaggaagttcgcccagctgatgaagctcaa
gcagcgaagcgccgccggctgccctccagctcagctgggcctaacaccccggttccactt
tcagcaccagcacagcagaatcacagtattaccactcagccaaccgtggagcctccctcc
atgactcttactaccaatcaggaagcccccactcccgtcagcagcgttcagacggacaca
gagaccccaatggacacagtcgacaacctcgctgaacgccctccagtctccaaccctccg
ctgactcagcagcccatcccttttcaggccacattgaactctgaccccttcctgtctgct
ccgtcctcctcctcaccaccaccaccacctccaccaccaccacaacacatggctgacagc
tacacaccaagcagcggctacgtttcctacatggagacactcctccactcacattttcct
caggacgaagccccaggcccagtgtattag

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