Gambusia affinis (western mosquitofish): 122839297 Help Entry 122839297         CDS       T07758                                  Symbol sympk Name (RefSeq) symplekin   KO K06100   symplekin Organism gaf  Gambusia affinis (western mosquitofish) Pathway gaf03015   mRNA surveillance pathway gaf04530   Tight junction Brite KEGG Orthology (KO) [BR:gaf00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     122839297 (sympk)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04530 Tight junction     122839297 (sympk)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:gaf03021]     122839297 (sympk)    03019 Messenger RNA biogenesis [BR:gaf03019]     122839297 (sympk) Transcription machinery [BR:gaf03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      122839297 (sympk) Messenger RNA biogenesis [BR:gaf03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      122839297 (sympk)     U7-dependent histone pre-mRNA processing factors      122839297 (sympk) SSDB OrthologParalogGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N HEAT_MROH2B_C Cnd1 PDS5 Adaptin_N Motif Other DBs NCBI-GeneID:  122839297 NCBI-ProteinID:  XP_043986678 LinkDB All DBs Position LG11:complement(29022170..29031898) Genome browser AA seq 1226 aa AA seqDB search MERPSKDGEPPAVIDVTTSEKVVELLNQAALIPTDEKLTVLKQVQELIINKDPSLLDNFL DEIIAFQTDRSMEVRKFVIGFIEEACKRDNELLLRLIANLNLLLKDDSVNVVKKAILSLT QLYKVALQWLVRARSVSEMQEACWDLVSQMTGDVLSMLDSENDGVRTHAIKFTESLIVTL SPRTPESDVPKRQEGDISLDKVPRDHPYIRYDALCDEGKAALDKLLKFMVHPAISSINLT TALGSLATIARQRPMFMSEVVQAYETLHANLPPTLAKSQVSSVRKNLKLHLVSVLKHPCS LEFQVQIGTLLLDLGMPQSEISRNTPPPREQRKRPRYEPAVEGKKVKMEPALIEDDEDKE EPVPLATPKPAAAPTPQSAIDLTAEFLRPLLTPENVANLVLISMVYLPDVMPASFQATYT PVESAGTDAQIKHLARLMATQMTAAGIGPGLEQCKAREDESGKEEPAEDESGGKDVLIRR SLSSMVGQAISVVGGYSEKPPTPEVPAVKRLPEPILPSVQTKMAGAGGRKKVFRLADVVQ PLSDSQIGALSSRAVKRILHSEKAVTQSGMSHVRVKLLSRLVTQFEGVMKEDVLDYVLED MRCRSDLAFSLLYQEYNSYLSQLPAGLLDGYDHCLYTLLSGLQEKPEQRDGSVGRPPSCP LCPSNMSYSIPMSCLISLFVSIRFRVSPSRVYLGMTTLKELIVKRPSRQFQYLHVLLDLS SHDKEKVRSTALAFLKRMYEKDHLRDYIEKFALNYLQLLVHPNPPSLLFGADKDTEVAAP WTEETVRQCLFLYLSLLPLNHRLVHELASVYTEAIADIKRSVLRAIEQPIRGMGMNSPEL LLLVENCPKGAETLVTRCLHILTDKVPPSPELVERVRDLYHKRVPDVRFLIPVINGLEKN EVIQALPKLIKLNPIVVKEVFNRLLGTQHSEGSSSVSPLTPGDLLIALHNIDSTKCDMKS IIKATNLCFGEKNVYTSEVLAVVMQQLMEQNPLPMLLMRTVIQSLTMYPRLGGFVMNILS RLIVKQVWKYPKVWEGFVKCCQRTKPQSYSVLLQLPPLQLASVFERCPEMRAPLLQHVLS FTPHQQAHIPTSVMAVLEAHKKPDPVPAEPVLEEEPAEPTVAHQPGPGPEPGPGPAVQQE TVLLRDEEEPMEQEEAEPLTPETTDPIHQEEEPKAAEEPEPEPGQEPLEEPMEEAEAEPS DQPEPLMAPESEATPPAAGSGSEDAE NT seq 3681 nt NT seq  +upstreamnt  +downstreamnt atggagcgtccttcaaaggacggggagcctcctgctgtcatcgacgtcaccaccagcgag aaggtggtggagctgcttaaccaggcggctctgatccccacggatgaaaagctcactgtc ctcaaacaggttcaggaactcatcatcaacaaggatccgtctcttctggacaacttcctg gatgagatcatcgccttccagacggaccggtccatggaagtcaggaagtttgtgatcggg ttcattgaggaagcctgcaaacgggacaacgagcttctgctgcggctcatcgccaacctg aacctgctgctgaaggacgacagcgtcaacgtggtgaagaaggccatcctgtccctgacg cagctctacaaggtcgccctgcagtggctggtccgggcccggtcggtgtcggagatgcag gaggcctgctgggacttggtgtcccagatgaccggagacgttctgagcatgctcgactcg gagaacgacggcgtccggacacacgccatcaagttcaccgagtcgctgatcgtcacgctg tcgccgcggacgcccgagtctgacgtccccaagagacaggaaggagatatcagcctggac aaggttcccagggaccacccctatatccgctacgacgctctgtgtgacgaggggaaggcg gcgctggacaagctgctgaagttcatggttcatccggccatttccagcatcaacctgaca accgcgcttggctccctagcaaccatcgctaggcaacggcccatgttcatgtccgaggtg gtgcaggcctacgagacgctgcacgccaacctgccccccaccctggccaagtcccaggtg agcagcgtgaggaagaacctgaagctgcacctggtgtcggttctgaagcatccgtgcagc ctggagttccaggtccagattggcacgttgctactggacctgggaatgccgcagagcgag atcagccgcaacacgccgccaccgcgcgagcagaggaagcgcccgcgctacgagcccgcc gtcgagggcaagaaggtcaagatggagccggcgctcatcgaagacgacgaggacaaagag gagccggtgccgctcgccaccccgaagccggcggccgccccgactccgcagtcggccatc gacctgacggccgagttcctgcgacccctgctgaccccagagaacgtcgccaacctggtg ctcatcagcatggtgtacctgccggacgtcatgccggcgtccttccaggccacctacaca cccgtggagtcggccggaaccgacgcccagatcaaacacctggcccggctgatggcgacc cagatgacagcggccgggatcggaccaggtctggagcagtgcaaggcgcgggaggacgag tcggggaaggaggagccggcggaggacgagtcgggggggaaggacgtcctgatcaggcgg tcgctgtcctccatggtgggccaggccatctctgtggtgggcggctacagcgagaagccg cccacccccgaggtgcccgccgtcaagaggcttcctgagcccatcctgccctctgtccag accaagatggcgggcgccggcggcaggaagaaggtgttccgcctcgcggacgtggtccag ccgctgtccgactcgcagatcggagcgctgtcctccagagctgtgaagcgcatcctgcac tcggagaaggcggtcacccagagcggcatgtcccacgtcagggtgaagctgctgtcccgg ttggtgacccagttcgagggcgtgatgaaggaggacgtcctggactacgtcctggaggac atgcgttgccgtagcgacctggccttctctctgctgtaccaggagtacaacagctacctg agccagctgccggccggcctgctggacggatacgaccactgcctctacacgctgctgtcc gggctgcaggagaaacccgagcagagggacgggtcagtggggcggccgccatcatgtcca ctctgcccctccaatatgtcctactccatacccatgtcctgcctcatttccttatttgtg tctatccggttccgggtttctccatcccgggtttatctgggcatgacgacgctgaaggag ctgatcgtcaagaggccgtccaggcagttccagtacctccatgttctgctggacctcagc tcccacgacaaagagaaggtccgcagcacagccctggccttcctgaagcggatgtatgag aaggaccacctgagggactacatcgagaagtttgccctgaactacctgcagctcctggtt cacccgaacccgccctcgctgctcttcggcgccgataaggacacggaggttgctgctccg tggacggaggagacggtgagacagtgtctcttcctctacctgtccctccttcctctgaac caccggctggtccatgagctggcgtccgtctacaccgaggccatcgccgacatcaagcgc agtgtgctgcgcgccatcgagcagccgatccgtgggatggggatgaactctccagagctt cttcttctggttgaaaactgtcctaaaggggcggagactctggtcactcgctgtctgcac attttgaccgataaagtgcctccgtcgccggagctggtggagcgggtccgggacctctac cacaagcgtgttccggacgtccgcttcctgatcccggtcatcaacggcctagagaagaat gaagtcatccaggctctgccgaagctcatcaagctcaaccccatcgtcgtgaaggaagtc ttcaaccggctgctggggactcagcacagtgagggaagctcttcggtttctccgctgact ccaggagatctgctcatcgccttgcacaacatcgactcaacaaagtgcgacatgaaatcc atcatcaaagccaccaacctgtgcttcggggagaagaacgtttacacgtcggaggttctg gcggtggtgatgcagcagctgatggagcagaacccgctgcccatgctgctgatgcgcacc gtcatccagtccctcactatgtacccgcgcctgggcggcttcgtcatgaacatcctgtcc cgcctcatcgtcaagcaggtgtggaagtaccccaaggtgtgggagggcttcgtgaagtgc tgccagcggaccaagccgcagtcctacagcgttctgctgcagctgccgccgctgcagctg gccagcgtgtttgagcgctgcccggagatgagggcgccgctgctgcagcacgtcttgtcc ttcacgccgcatcagcaagctcacatcccgacctccgtcatggcggtgctggaggcccac aagaagcccgacccggtgccagcggagccggttctggaggaggaaccggcggaaccgact gtcgcacatcaaccaggacccggaccagaaccaggaccaggaccggcggtacagcaggaa accgttctgctgagggacgaagaggaaccgatggaacaggaagaggcggagccactgaca cctgagacgaccgacccgattcaccaggaggaagagccgaaagctgcagaggaaccagaa ccagaaccgggccaggagccattggaggaaccgatggaggaggctgaggccgagccgtcg gatcagccagaaccgctcatggctccagaatcggaggcgacgccacctgctgctggaagc gggtcggaggacgcagaatag

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