Gambusia affinis (western mosquitofish): 122839300
Help
Entry
122839300 CDS
T07758
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
122839300 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122839300 (xrcc5)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
122839300 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
VWA
DUF6005
Motif
Other DBs
NCBI-GeneID:
122839300
NCBI-ProteinID:
XP_043986682
LinkDB
All DBs
Position
LG11:complement(18378661..18390204)
Genome browser
AA seq
722 aa
AA seq
DB search
MAGAKSALVLCMDVGFSMSNSAPGEEPPFAQAKKVIQKFVQRQVFKETKDELALVLFGTD
STKNSLDRDGQYQNIKVHRHLMMPDFELLEEIEHQIHPENQQADWLDALVVSMDLLKTET
QGKKCDRLNIVLLTDLSTEASSDKLDVIIENLKQAGITLQFFLPFPVEDEEEGEGDGDRT
GSGDPGRGKGLSREQQSGLEMVKNIMLSLDEEEGLEEIYTFRNAVEQLRMFKRVERRPMT
WPCQLTIGSSLSIRIVGYKAVTEEKLKKMWITVDAQSNQRDDVKRETVFCLDDDNETEVQ
KEDIIQGFRYGSDIVPFSKVDQDQMKYKHDGKCFAVLGFTKKNLVLRHQFMGTQVVKIFP
ARDDEHAGVAMSALIRGLDELNMVAIVRYAYDRRSNPQVGAAFPCIKPEYECLLYVQLPF
MEDLYGRQFTFPSLENNKKIAPSETQLSAMDSLIDSMMLVTEDTDLLKPHHLPNPAFQRH
FQCLHHRAVHPDSPLPPTEPWLEAALDRPEVIQERCQAPLEEIKKLFPLTEVEKKKKLKT
SAQIFGKDSEEPDAKKAKEDEEEDEYSLANIAEGSVTSVGSVDPARDFRALIKQKTLPFG
EVCQQLTHRIEQLLSNKNTHYYMKSITCIQAFREQSVKRGNADLFNSYLQSLKRSIPNRA
LEVFWDLLVQDAVTLISKDEVEGSAVSKSEASQFLLAEERKEQVAPEPVEDTGDVDDLLD
MM
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggccggagcaaagtcagccctggttctctgcatggatgtgggcttctccatgtccaac
tcagccccgggtgaagagcctccatttgcacaggcgaaaaaagtcatccagaagtttgtc
cagcgccaggtttttaaagagaccaaggatgaactggctttggttctgtttggcacggac
tctaccaaaaactctttggaccgggatgggcaataccagaacatcaaagtgcatcgtcat
cttatgatgccggacttcgagctgctggaggagattgaacatcagatccaccctgagaat
cagcaggccgactggctggatgcgctcgtagtttccatggatcttctcaagacagaaacc
caggggaaaaagtgtgatcgcttaaacattgttctcctgactgacctgagcacggaggcc
agttcagacaagctggatgttataattgagaacttgaaacaagctggaatcaccctgcag
ttctttttgcctttcccagtggaggatgaagaagagggtgaaggagatggggacagaaca
ggttccggtgaccctggtaggggcaaaggtctctccagggaacagcaaagtggcctggaa
atggttaaaaacatcatgctgagtctggacgaggaggagggcctagaggaaatttacaca
ttcaggaatgctgtggagcagctgcgtatgtttaaacgcgttgagaggagacccatgacc
tggccctgtcagctcaccatcggtagctctctgtccatccgtattgttggctacaaagca
gtgactgaggagaaactgaagaaaatgtggatcacagtcgatgctcaaagcaaccagaga
gatgatgtgaagagagagactgttttctgtctggatgacgacaatgagacagaggtgcag
aaggaagacattattcagggttttcgttacggaagtgatattgtacctttctccaaagtg
gatcaggatcagatgaaatacaagcatgatgggaagtgctttgctgtcctgggcttcact
aaaaagaacttggttcttcgccatcagttcatggggacacaggttgtcaagatatttcct
gcacgggatgatgagcatgcaggcgtggccatgtcggctctgatccgtggtctggatgag
ctcaacatggttgccattgtgcgttacgcctacgaccggcgcagcaatcctcaagtgggc
gctgcattcccgtgtatcaagcctgaatatgagtgcctgttatatgttcagctgcccttc
atggaagatctctatggaagacagttcacatttccgtctcttgagaacaacaagaagatt
gctccatcagagacgcagctgtcggccatggactctcttatcgattcgatgatgcttgta
acagaagacacagatttgctcaaacctcaccatcttcccaacccggctttccagagacac
ttccagtgtctgcaccacagggctgtacaccccgactctcctcttccccccacggagccg
tggctggaggctgctctcgatcgccctgaggtcatccaggaacgctgccaagctccactg
gaggagataaagaagttgtttccactcaccgaagtagagaagaaaaagaagctgaagaca
agcgctcagatttttggcaaagactctgaggaaccagatgccaagaaagcaaaagaagac
gaagaagaggacgagtatagcctggcaaacatcgctgaaggatctgttacttctgtggga
agcgtcgatccagcccgggacttccgcgctctgatcaaacagaaaactcttccgtttgga
gaagtctgtcagcagctgactcacaggatagagcagctgcttagcaacaagaacacgcac
tactacatgaaaagcatcacctgtatccaggctttcagagagcagtctgttaagcggggg
aacgctgatctgttcaacagttaccttcagtccctgaaaaggagtattcccaacagagcc
ctcgaggtcttctgggacctgcttgttcaagacgctgtgactttgatcagcaaggacgag
gttgaaggaagcgccgtgtcgaaaagtgaagcttctcagtttcttttggctgaggaaagg
aaagaacaagttgcccctgaaccggtggaagacactggcgatgttgatgacttgctggac
atgatgtaa
DBGET
integrated database retrieval system
