Gambusia affinis (western mosquitofish): 122839343
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Entry
122839343 CDS
T07758
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122839343 (apex2)
Enzymes [BR:
gaf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
122839343 (apex2)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
122839343 (apex2)
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
122839343
NCBI-ProteinID:
XP_043986762
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Position
LG01:complement(32898891..32903669)
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AA seq
562 aa
AA seq
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MKLVTWNINGIRTFKSGIKMALDSLDADIICVQETKVTRDLLDERTAIVDGYNSYFSYSR
GRSGYSGVATYCRDNATPSAAEEGLTGLLTNHEGAVGCYGDHRDFSSEELQLLDNEGRAV
ITQHKIMCQDTEQTVTVINVYCPRADPDKPERKQFKLQFYKLLQCRAEALLEGGSHVVVL
GDVNTSHQQIDHCDPINIEDFAENPGRKWLNSFLYSSVQEEEEEEHHKKSETTDCVQMGK
FIDIFRYFHPTRTNAFTCWSTLTGARQTNYGTRIDYIFADHRLAQEQFSGADIMPEVEGS
DHCPVWAHLKCSLLPCSKPPPLCTRYLPEFAGKQQKLSRFLVKVDQKSKEALPGSQEEEE
KRENMNPFGGDSKKRPSASESAAPKGKKSKTTNTSSKPQGNLLSFFKPKLTDVKPCENTP
GLNQFTSSHSKSKASATSELRSGTGGTTEHTELVVDAPSQLCTSSAAGETGSAVKAKQPA
SRLPEGQSDVKKGASSVFWKSVLHGPPSAPCCKVHREPCVLRTVRKDGPNMGKQFFVCGR
PQGHASNPEARCNFFMWVEKGK
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtcacctggaatattaacggcatcaggacgtttaaaagcgggataaaaatg
gctcttgatagcttggacgcagatataatttgtgttcaggagacaaaagtcacaagagac
ctgctggatgaacggacggctattgttgacggctacaactcgtatttcagctacagtcga
ggacgcagcggttattcaggtgttgcgacttactgcagggataatgccactccttctgct
gctgaagagggactcacaggcctgctcaccaaccatgaaggagctgttggatgctatggt
gaccaccgtgacttttcaagtgaagagctgcagcttttggataatgaggggcgagccgtc
atcacgcagcacaaaataatgtgtcaagacacagagcagactgttactgtaataaatgtc
tactgtccacgcgctgaccctgacaagccggagcgaaagcagttcaagctgcagttctac
aagctgcttcagtgtcgggccgaagcgttattagaaggtgggagccatgttgtcgtttta
ggagatgtgaatacttctcatcagcagatagaccactgtgacccaataaatattgaggat
tttgctgagaatcctgggaggaaatggctaaatagctttttgtacagtagcgtccaagaa
gaggaagaggaggaacatcataaaaaatcagagacaacagattgtgtccaaatgggaaaa
tttatagacatcttccgctactttcacccaactcgtaccaacgcattcacctgttggtcc
actctcactggagcccgacagactaactacggcactcgtatagattatatatttgcggac
caccggctggcccaggagcagttttcgggggcagacattatgccggaggtggagggctcc
gatcactgtcccgtttgggctcacctgaaatgttcgcttcttccttgctccaaacctcct
cccctctgcactcgctacctgcctgagtttgccggcaagcagcagaaactctctcgcttc
ctggtgaaggtggaccaaaagtcgaaggaagctttacctggatcccaggaagaggaggaa
aagagggagaacatgaacccgtttggtggcgatagtaaaaaacgaccatcagcgtcagaa
tctgctgccccaaaggggaaaaagtcaaagacaacaaatacctcctcaaagccacagggt
aacctcctttcttttttcaaacccaaactcacagatgttaaaccgtgtgaaaacacacct
ggtctgaaccaatttacctcatcgcacagcaagtcaaaggcatccgcgaccagtgaactg
cgttcaggaacgggcggcacgactgaacacactgagcttgttgttgacgctccgtcccag
ctgtgcaccagcagtgccgcaggagaaacgggcagcgcggtgaaggccaaacagccggcc
tctcggctccctgaggggcaatcagatgtcaagaagggggcatcatctgtgttttggaag
tctgtgcttcacggcccgccctcggccccctgctgcaaggtgcacagggagccctgtgtg
ctccgtactgtgagaaaagacggcccaaacatgggcaaacagttctttgtgtgtggacgg
cctcagggacacgcttccaaccccgaggcgcgctgcaacttcttcatgtgggtagaaaaa
ggaaagtaa
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