Gambusia affinis (western mosquitofish): 122839344
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Entry
122839344 CDS
T07758
Symbol
edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR isoform X1
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
122839344 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
gaf04050
]
122839344 (edar)
Cytokine receptors [BR:
gaf04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
122839344 (edar)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Death_EDAR
RAG1
TNFR_c6
GP46_beta
Motif
Other DBs
NCBI-GeneID:
122839344
NCBI-ProteinID:
XP_043986759
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Position
LG11:complement(19582681..19624735)
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AA seq
522 aa
AA seq
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MSQSRGQKKFVFLSLILVSRLFVSAEYSSCGEYEFFNQTSNSCQACPQCQPGQEPHMNCG
YGMKDEDFACIPCSQGKYSKGKYEICRRHKDCDALYKATVRVAGTAESDAECGPCLPGYY
MLDNKPRNAYGMVCHSCQNAPSNTKECMQISKPKEKPPINPGSTTVFPHRIKESPGQGHL
ATALIIAMSTIFIMAIAIVLIIMFYILKAKPGGHACCSGQVVKAVEAQTIKQDDKKDVPD
NVVIFSEKDEYDKLKAAPQKTVKSENDASSENEQLLSRSIDSDEEPSSDKQGSVESASPN
PNLCLVDLGNKPDLSLLSLGILDRGRTSSGAPIVAASHTINIQSPNHINSVNHIASSNHI
SSMNGINNNKTPGMLQSRRKKILELYARTCNITEGLSPTELPFDCLEKTSRMLSSSYSSE
AAVVKTWRHLAESFGLKRDEIGGMSDGLQLFERVSTAGYSIPDLLTRLVQIERLDAVESL
CVDVLGTSEVVAVAGRQSINSFHSQLVCPSQCTSPSQRCASV
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagagcagaggtcagaagaagtttgtcttcctgtcgttaatattggtgtctcgt
ctgtttgttagtgccgagtattccagctgtggagagtacgagttcttcaaccagaccagc
aacagctgccaggcctgtcctcagtgccagccagggcaagaaccgcatatgaactgtggt
tacggtatgaaggatgaggactttgcctgcataccgtgctcgcagggaaaatactccaaa
ggaaagtacgagatctgcaggcgccacaaggactgcgatgctctctacaaagccactgtc
cgtgtagcaggaactgctgaaagtgacgctgaatgtgggccatgtttaccagggtattat
atgttggacaacaaacccaggaacgcttatgggatggtctgccattcctgccaaaatgcc
ccgagcaacacaaaagaatgcatgcaaatcagcaaacccaaagaaaaaccaccaattaac
cctgggagcacgacagtcttccctcaccgaattaaagaatcacctggacagggtcattta
gccacagcgcttattatcgccatgtcaaccattttcatcatggctattgccatcgttctc
atcatcatgttttatatcctgaaggccaagccgggtggccatgcatgttgttctggccag
gttgtgaaagctgtggaggctcaaaccatcaaacaggatgacaagaaagatgtccctgat
aatgtggtaattttctctgagaaagatgagtatgacaaattgaaagcagctcctcagaag
acggtgaaaagtgaaaacgatgcatcatctgagaatgagcagttgttgagccgcagcatt
gacagcgatgaggagccgtcatctgacaagcagggatctgtcgagagcgcgtcccccaac
cccaacttgtgcctcgtggacctgggcaacaaacctgacctctctctgctctctttggga
atcctggaccgcggtcgcacatccagtggtgcccccatagttgcagccagccacaccatt
aacatccagagtcccaaccacatcaacagtgtcaaccacattgcctccagcaaccacatc
agcagcatgaacgggatcaacaacaataaaaccccagggatgctacagagtcgaaggaaa
aagatactagagctgtatgctagaacctgcaatattaccgagggcctaagccctacagag
cttcccttcgactgcctggagaaaaccagccgcatgctgagttcctcctacagcagcgaa
gcggctgtggtgaagacatggaggcacctggcagagagttttggcctgaagcgtgatgag
atcggcggcatgagcgacggcctacagctctttgaaagagtgagcacggccggctacagc
atccctgacctcctcactcggctggtgcagatcgagaggctggacgctgtagagtcactg
tgcgtggatgtgctgggaaccagcgaggtggtggcagtggctggccgacagagtatcaac
agctttcacagccagttggtgtgtccgtcccagtgcacctcgccctcccagcgctgtgcc
agcgtctga
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