Gambusia affinis (western mosquitofish): 122839402
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Entry
122839402 CDS
T07758
Symbol
u2af1
Name
(RefSeq) splicing factor U2AF 35 kDa subunit
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122839402 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gaf03041
]
122839402 (u2af1)
Spliceosome [BR:
gaf03041
]
Complex A
U2 snRNP components
U2 related factors
122839402 (u2af1)
Complex B
122839402 (u2af1)
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Motif
Pfam:
zf-CCCH
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
122839402
NCBI-ProteinID:
XP_043986866
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Position
LG11:12171559..12175683
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AA seq
237 aa
AA seq
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MAEYLASIFGTEKDKVNCSFYFKIGACRHGDRCSRLHNKPTFSQTIALLNIYRNPQNSAQ
SLDGLTCTVSDMEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRNE
EDAEKAVIDLNNRWFNGQPIHAELSPVTDFREACCRQYEMGECTRGGFCNFMHLKPISRE
LRRELYGRRRKGRHRSRSRSRDRDRGRGGGGGGGGGGGGGRNHERRRSRDRERSGRF
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcagaatacctggcgtccatttttgggacagaaaaagataaagtcaactgttcgttt
tactttaaaattggtgcctgccgacatggcgaccgctgctccagattacacaacaagcca
acatttagccagacaattgccctgctgaatatttacaggaaccctcagaacagcgctcag
tctttggatggcttaacctgtaccgtcagcgacatggagatgcaggagcactatgatgag
ttctttgaggaagtcttcacagagatggaagaaaaatacggagaagtggaggaaatgaac
gtttgtgacaaccttggggaccatcttgtgggaaatgtttatgtgaagttccgtaatgag
gaggatgctgagaaggctgtaatcgacttgaacaatcgatggttcaacgggcagccgatc
cacgcggagctctctcccgtcacagacttcagagaggcctgctgtcgccagtatgagatg
ggggaatgcactcgtggaggtttctgtaacttcatgcatctgaaaccaatctcgcgtgaa
ctcaggagagagctctatggacgccgcaggaagggccgccaccggtctcggtcccgatcc
agagaccgggacagaggccgcggaggaggtggtggtggaggaggaggaggaggaggaggc
cgtaaccatgagcggcgtcggtccagagacagagagcgttcaggacgattctga
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