KEGG   Gambusia affinis (western mosquitofish): 122839494
Entry
122839494         CDS       T07758                                 
Symbol
rif1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
gaf  Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gaf03032]
    122839494 (rif1)
DNA replication proteins [BR:gaf03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    122839494 (rif1)
SSDB
Motif
Pfam: Rif1_N HEAT_ULK4
Other DBs
NCBI-GeneID: 122839494
NCBI-ProteinID: XP_043987025
LinkDB
Position
LG11:2183929..2207960
AA seq 2333 aa
MMATAGPPNTSSFLPLLETLEDVTAGQSEQTDAYLTIANRLSGEEGRQFLPAVEKNFSRL
GKVILTHTNSSNAELSQAALQALGFCVYHSQVVSGVSEIFAAQILSALCSLVTKSIDKNT
CTRALWVISKQSFPADVVGKNVPTLLAALEAVWNREDIQSAVMEHEALNVIIRLLEQVPT
PMCDGAVRWAKLVIPLVVHSASKVRLRAAAALEMGMPLLLAKQKEVAAIIEPIMSTKLIP
ELQKLFMSKNETNVLKLWPLFVKLLGKLLHKGGPFINSLLHLEELGFRSSSPTIKKIAFI
AWKSLIDNFALNPDILCSSKRMKLLMQPLTSIHVRTEALLLSKVEVWWYLIVQLGPNLSS
NFDQVAVPLLQTTIGSDSPSVPNTPSRTAAQNGTVTPSTPKSGGSSFNTSASTPRMCLNS
SMQLPASFSSIQQLGLEMLLHYFLGPEVIAASAKNKLVLSLEPLTHPLLSGAPSFMKHAA
VLISTMREGFINAGKDAPEPLLAVIWTSLVRFVSLTIESAGSKKERQGSECLTLMLQALQ
SVVSSEALPADRVLVLLEATVKGLPPRVLGSASYQVGKMDVLNGTPALFVILLLFKSSKL
PAYLEHDSRFFQCLQTLVLCGLSGPTSPLAFAEAVLGVMSSCAASLQNKELLWRMWSLLV
GPLTDTITQSNEVNQGDALEHNFSATYSALMFPITHLLQQASQKSLLSSWSKLYRVFARC
AALVVTAEENICCEELCVKMAAAADREALKVPSTLSAVSSILQVMVECVDFSPYTPHFQQ
KLKSPHTPVNWTRKRSKALGNLSAFLSLLVQSLQVYLEAPEVAPDATPLALLSIVSTLFA
NLVLANAVTEALGVLVQPLVLFCKRAAGGGTEFSPQLHGKLEKLLCEVLGCLQSRSTLAY
DDELLALLSPLLCVMFPHKNKHLRSAVAQFWNATFANTVRLAYPEELRPVLSQMKQKTPI
ILPGFEVVDVPDELSETYSSESSELEPKLSGIPISSAGKRDSMLSRADLKDRSATKTAKA
VPTKLDFGSPKPPRRHVLEEEASIDFVFIPPETKERVLTEHQKEVKRTKRVDIPAMYNNL
DASQDTTVFSQYTQSQDDSLDKVPTEQVDGVPPEAPSETEEKPREDAEILSKETQDYASP
KHDDKMKESIPDSADVFLEEPTKSTERTEDMDVESKDSVSPNTSASSDLVSGTPQKPSSR
RQSFITLEKYGEGKLASPSSGSSFTGPLVKTSNSQDHSSEKNILSPEASQTSTAPNSQDP
TPSETVGPRCPGSDSPRRPKESRTRSEPVRLIERMQSDLAEEEDVIPDTQTKDEDKESTS
YSEEINSSSQDEESETVLDDSQSSLIQTPSGEPRRSRRHRIRPQLPGEDPDDREAKYTHV
KRRRSGEDPKSESSNLTPSRPNTRSKQAAVENSSRIQLRSKSQGNADESSQSNSQVRHRK
KIKLYSLSEDLLGSPERKRRSTSGLDSSQTDVKSESLSGHESQKHRKRNEVSKVLKEGGD
AEMPKEGSNHTVTEGTVDLSQKDDPYPNSDSQTAVPLAQTEKSEEVKPEEQTEQGESQKE
KQDVVTSSPQGEDKSQEQIDSDALMFSPVEESKGETRNLLQNQKIMQDKSIETVIDNCSQ
EDSQVSPSSDSQNRRRSRRTKATESEGKDDSINSSGRLTRSQTSTPVNQPEAGVGGKTRR
SKLDSSQSLTPESSRPLDASGSGSSQGKGRLRSSQSSASSVETPESESSEVLVNAVRKKK
GRKSRASLKSPLPLERKEDILEDTSQNSETQNNLEESLETQDSKESGSKTESKEEESESP
MITETPADLPLETEDSKKAESKDASQDTKSLDTTEQRDSELESSVFGDAPAQDSCPAEEK
LQTSEMSKEKAEKVSETEGVTERQEESNSDQQDFPAPSPADLSPEELQQSQMECAQVTDE
EEQSATHQVSEASTKEDITLQDNEDGQPETSEDRLEEAPATKSSGAAGPDCTTAAFSPAT
AQDSPVKQKDLEAVTEPDVGQSPSNGRLKGAWSPSASPSTSILKKGQKRPLEVETTSPLV
KSRRVSFANPIQQQETADDIDRRSPALRTSSPRRSKGCNVPQQKHITTPTKGMLVLSPRN
IHSPSYRSSKKCLISEMTQEPRAVPRDCIYPSLVGCSAPVEAVLSQISSTMWSRGFGQLI
RARNVKSVGDLCALTPSEIKTLPIRSPKISNVKKALKIYEQQRKGRADELKSFDETERMT
SEVEEAASSRNHDDEEKTSAETLATELLDEPPPADAAAEQQDGEQQPEVAVVAADPAAEL
SAAVEALACRATPLELSRCSPQQLLQMHEQLGGMMRGVAVELQTRLCHASDKH
NT seq 7002 nt   +upstreamnt  +downstreamnt
atgatggctactgcagggcctcccaacacctccagcttcctccctctgttggagactctg
gaggatgttacggccggacagtcggagcagacggacgcctacctgaccatcgccaatcgc
ctcagtggggaggaaggccgccagttcctcccagcagtagagaagaacttctcacgtttg
ggtaaagtcatactgacccacacaaacagttccaatgccgagctgagtcaggctgccctc
caggcattagggttctgtgtgtatcactcccaggttgtttccggagtctctgagatcttc
gcagctcagatactgtcggctctctgctccctggtgacaaagtccatcgacaagaacacc
tgcaccagagccttatgggtcatctccaagcagagctttcctgcagacgtagtcggcaaa
aacgtgccgactctgctggctgctttggaggctgtgtggaacagagaggacatccagtct
gcagtgatggagcatgaagccctgaacgtgatcatcaggctgttggagcaggtgccgacc
ccgatgtgtgacggcgcggtgcgctgggcgaagctggtcatccccctggtggtgcactcc
gcctccaaggtgcgtctgcgcgccgctgccgccttggagatgggcatgcctctgctgctg
gccaaacagaaggaggtggctgccatcatcgaaccaataatgtccacaaaactgatccca
gagctgcagaagctcttcatgtccaagaatgaaaccaacgtcctgaagctctggccgttg
ttcgtgaagcttcttgggaagctgctgcataaaggcggtccgttcatcaactccctgctg
cacctggaggagctgggcttccgaagctcctcccccaccatcaagaagatcgccttcatc
gcctggaagagcctcatcgataactttgctctcaacccagacatcctgtgcagctccaag
cgcatgaagctgctgatgcagccgctcacctccatccacgtccggacggaggcgctgctg
ctctccaaggtggaggtgtggtggtacctcattgtgcagctgggacccaatctgtcctcc
aacttcgatcaggtggccgtgcctctgctccaaacgaccattggatccgattcgccgtcc
gttccaaacactccgtctcggaccgccgctcagaatggaaccgtgactcccagcacccca
aaatcaggcggcagcagcttcaacacgtcggccagcacgccccggatgtgcctgaactcc
agcatgcagcttcctgccagcttctcttccattcagcagctgggcctggagatgctgctg
cactacttcctggggccagaggtcatcgctgcttcagcaaagaacaaacttgtgttgagt
ctagaacctctgacccacccgctgctctctggtgctccgtccttcatgaagcacgcggcc
gtgctcatctccaccatgagggagggcttcataaacgccggcaaagacgctccagagccg
ctgctggccgtcatctggaccagcctggtccggtttgtcagcttgaccatagagtcagcc
ggcagtaagaaggaacggcaaggcagtgagtgtctcaccctgatgctgcaggcgctgcag
agcgtggtctcctccgaggctctccctgcagacagagtcctggttctgttggaggccaca
gtgaagggtctgcctccaagagtgctgggctccgcctcctaccaagtggggaagatggac
gttctgaatggaaccccggctttgttcgtcatcctgctgctcttcaaaagcagcaaactg
ccggcctacctggagcacgacagcaggttcttccagtgcctgcagactctggtgttgtgc
ggcctgtctggacccacgtctcctctggccttcgccgaggccgtgctgggcgtcatgagc
agctgtgcagcgtctctgcagaacaaggagctgctctggaggatgtggagtttactagtc
ggccctctgactgacaccatcacacagtctaatgaggtgaaccaaggtgatgctctggag
cataacttcagcgccacgtactctgccctgatgttccccatcactcacctccttcagcag
gcgtcccagaagtccctgctgtcctcctggtccaagctgtaccgtgtgttcgctcgctgc
gccgccctggtggtgacggctgaggagaacatctgctgcgaggagctctgtgtgaagatg
gctgccgctgcagacagggaggctctgaaggttccttccacgctgagcgccgtctccagc
atcctgcaggtcatggtggagtgtgtggacttctctccgtacacgcctcactttcagcag
aagctgaagtctcctcacactccagtcaactggacgcggaagcggagcaaagccctgggg
aatctgtccgccttcctgtccctgctggtccagagtctgcaggtgtacctggaggccccc
gaggtggcccccgacgccacgcccttggccctgctctccattgtgtccactctctttgcc
aacctcgtcctggccaacgccgtcaccgaggcgctgggtgtgctcgtccagcctctggtg
ctcttctgtaagcgcgctgcgggcggcggcactgaattctcccctcagctccatggaaag
ctggagaagcttctgtgtgaggtcctgggctgcctgcagtcccgctccactctggcctac
gacgacgaactgctggctctgctgtctcctctgctgtgtgttatgtttccgcacaagaac
aagcatctgcgctcagccgtcgctcagttctggaacgccacctttgctaacacagtcaga
ctcgcgtatccagaggagctcaggccggtgctgagccaaatgaagcagaagactccgatc
attcttccagggtttgaggtcgtcgacgttcctgatgagctcagtgagacctattcaagt
gaaagctctgagcttgagccgaagctcagtgggatccccatttcctctgctgggaagaga
gactccatgctcagcagagctgatctgaaggaccgcagtgccacaaagacggccaaggcg
gttccgacgaagttggactttggttctcccaaacctccccgcaggcacgtcctggaggaa
gaggcttccatcgactttgtcttcattcctcctgagacaaaggagagggttctaaccgag
caccagaaggaggtgaaaagaaccaaaagggttgatattccagccatgtacaacaacctg
gacgcttcccaggacacgaccgttttcagtcagtacacacagagccaagacgactcactg
gataaagttccaactgaacaggtcgatggcgtcccaccagaagctcccagtgagacagaa
gagaaacccagagaagatgctgaaattctttctaaagaaactcaagactacgccagtcct
aaacatgatgacaaaatgaaggagagcatcccagactcggcagatgtttttctggaggag
cctactaaaagcactgagaggactgaagacatggacgttgaatcaaaagacagtgtgagt
ccaaacacgtctgcttcttctgatttggtgtcagggactcctcaaaaacccagcagtcgg
cgccagtcatttattaccttggaaaagtacggcgagggaaagctggccagtcccagcagt
ggatcctcttttacaggtcctcttgtaaagacgtccaacagtcaagatcactctagtgag
aagaacatattgtcccctgaggcctcacagacatccacagcaccaaactctcaggatccc
actccttcagaaacagttggtccacggtgtcctggaagcgactctcctcggaggccgaaa
gagtcaaggacaagaagtgagccggtaagattaattgagagaatgcaaagtgacttggca
gaggaggaagatgttatccctgacacacagacaaaagacgaggacaaagaaagcactagt
tactcagaagaaatcaactcttccagtcaggatgaggaatctgaaacggtgttggatgat
tcccagtcatctctgatccagacgccttcaggtgaaccaagaagatccagacgccacaga
ataaggcctcagctccctggagaagacccagacgaccgtgaggcaaaatacacacacgtc
aaaagaagacgttctggagaagatccaaaaagtgaatcttctaatttgacaccaagtaga
ccaaacacaagaagtaaacaggctgcggtggagaacagtagcagaatccagctgcgatcg
aagtctcaaggcaacgccgatgaatctagccaaagtaactctcaggtaagacaccgaaag
aagatcaaactttacagcctttcagaggatcttcttggatctcctgagcgtaaaaggaga
agcaccagtgggctggattctagccagactgacgtcaaatcagaatcactctccggtcat
gaaagccaaaagcacagaaaacgcaatgaggttagcaaagttttaaaggagggtggtgat
gctgaaatgcccaaagaaggatccaaccacactgttacagagggtacggtagatctgtct
cagaaagacgatccctacccaaacagtgactcccaaacagccgtacctttggctcagact
gagaagtctgaggaggtaaagcctgaagaacagactgaacaaggtgagagccaaaaggaa
aagcaagacgttgtcacatcttctccccagggtgaagacaaatctcaagaacagatagat
tctgatgcactcatgttttctccagtggaagagtccaaaggtgaaactagaaatttgcta
cagaatcagaaaattatgcaagacaaatccatagaaactgtgattgacaactgtagccag
gaagattcccaggtctcgccttcatctgacagtcagaacagacgaagatccaggcgaacc
aaagcaacagagtctgaaggcaaagacgatagcatcaactcttcaggacggttgacacgt
tctcagacttccactcctgtcaatcaacctgaggctggagttggaggcaagaccagaagg
agcaaattagactctagtcaaagcttaaccccagaaagttctcggccattagatgcatcc
ggatcagggtcgtctcaaggcaagggcagactaagatcctctcagtcttcagcatccagt
gtagagacgccagagtcggagtcctcagaagtcctagttaacgccgttcgcaaaaagaaa
gggaggaagtctcgagcatctctgaagagtccacttcctcttgaaaggaaggaggacata
ttggaagatacttctcaaaattcagagacacaaaacaacttagaagaatcattagagact
caagattcaaaggaatctggaagcaagacagagtcaaaagaggaagagtctgagtcccca
atgattactgagacaccggctgatttacctctggagacagaagattcaaagaaggcagaa
agtaaagacgcaagccaggataccaagtcactggacactactgaacaaagagactcggag
cttgaatcttctgtgtttggagatgcaccagcacaagactcatgtccggctgaggagaaa
ctgcaaacctctgagatgtccaaagaaaaagcagaaaaggtttctgaaactgaaggagtt
actgaaagacaggaggaatcaaattctgaccagcaagactttccagctccttctccagca
gacctctctcctgaggagcttcagcaaagtcagatggagtgtgcacaggtcactgatgag
gaggaacagtctgccacacaccaggtctcggaggccagtactaaagaggacattactcta
caagacaatgaagacggtcaacctgagacatctgaggacagactcgaagaggcacctgcc
actaaatcgtcgggtgctgctggacctgattgcaccactgcagcgttctcaccagctact
gcccaggactctccagttaaacaaaaagacctggaggctgtaacagaaccagatgtcgga
caaagtcccagcaatgggcggttgaaaggagcatggtctccttcagcttccccttccacc
agcatcctcaagaaaggtcagaagagaccgttagaggtggagacgacttctcctcttgtc
aagtcccgccgtgtatctttcgctaaccccatccaacagcaggagacggccgatgacatc
gaccggcgcagtccggctctgagaaccagctctcccagaaggtccaaaggatgtaacgtc
cctcagcagaagcacattacaactccaacaaaaggcatgctggtcctgagccccagaaat
atccacagtccaagttacaggagctccaagaagtgcctgatttctgaaatgactcaggag
cctcgagctgtgcccagagactgcatctacccgtccctggtgggctgctcggcccccgtg
gaggctgttctttctcagatctcttccaccatgtggtctcgagggttcggacagctgatt
cgcgctcgaaacgtcaaatcagtgggcgacctctgtgccctgactccgtctgagatcaag
actctgcccatccgatctccaaagatctccaacgtcaagaaggccctgaagatctatgag
cagcagcgcaaagggagagcagatgagctgaagagcttcgatgaaacggagaggatgacc
tctgaggtggaggaggcggccagttctcgcaaccatgacgacgaggagaagacctcagca
gagactctggccacagagctgctggacgagcccccgcctgcagacgccgcggcggagcag
caggacggggagcagcaacccgaggtggcggtggtagcggcggaccccgctgcagagctc
tcggcagccgtggaggctctggcctgcagggcgacgcctctggagctcagccgctgctca
ccacagcagctgctgcagatgcacgagcagctgggaggcatgatgaggggcgtagcggtg
gagctgcagacgcgcctctgccacgccagcgacaaacactga

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