Gambusia affinis (western mosquitofish): 122839529
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Entry
122839529 CDS
T07758
Symbol
clasp1a
Name
(RefSeq) CLIP-associating protein 1a isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122839529 (clasp1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gaf04812
]
122839529 (clasp1a)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
122839529 (clasp1a)
Cytoskeleton proteins [BR:
gaf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
122839529 (clasp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
TOR1L1_N
Cnd1
Sec7-like_HUS
Adaptin_N
ParcG
MMS19_C
MMS19_N
TAN
HEAT_DAAF5
Paxt-1_C
Motif
Other DBs
NCBI-GeneID:
122839529
NCBI-ProteinID:
XP_043987093
LinkDB
All DBs
Position
LG11:29552295..29591912
Genome browser
AA seq
1581 aa
AA seq
DB search
MEPSVESCLAQVLQKDVGRRLQVGQEVIDYILDRNKSPELEQDQTALDKMVDAIASSWVN
SSNFKVNLLGLDLLSALVTRLQDRFRTHIGTVLPSLMDRLGDARDQVREQDQVLLLKIME
QAASPQYVWDRMLGGFKHKNNRTREGVCLCLIATLNTSGAQGLTLSKIVPHICSLLGDPV
GQVRDGAMSCLVEIYRHVGERVRLDLSKKGLPQSRLNVIFSRFDEVQRSGNMLPSSGSDK
NFEDEDSVDGGRSSSSSSSKAPPSGRRAVVSSVRRPSSASSTKSTGKEAAAGAVDEDDFV
KAFEDVPPVQFYSNRELEDQLTKIRDVLSDDKHDWEQRVVALKKVRSLVLAGAPDHEGFP
HQLRLLEAPLKLSAKDLRSQVVREACITLGYLSAVLRNKFDHGAESVMPTLLNLVPNSAK
VMATSGMAAIRLILRHTHYPRLIPIITSNCSSKSVAVRRRCYEFLDLLLQEWHTSTLERH
VAVLTETVRKGIHDADSEARSIARKCYWGFHGHYSREAELLFQALEATYQKALQSHLKSS
DSVVSLPQSDRSSSSSQESLNRPLSVKSVIGGSITRSKLAGSRSSATPGSLQRSRSDIDV
NAASSAKSRLGGVPASSPFSAAAALPPGSYASLDGAAGKSDGRVRTRRQSSGSVGGASPS
VVDSRGRSRAKVVSQSQPGSRSSSPGKLLGQNYGRIPRAAAPPSTAAERRSRIPRSQGCS
RETSPSRPGLARSRIPRPSMSQGCSRDTSRESSRDTSPARGFAPLASRRHSRSTSALSSA
EPHGQSDRYGLIHQARISASVNAMRVLNTGTEVEAAVADALLLGDSRNKRKPLRRRYESP
GMYSDDDANSDASSACSERSYSSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGL
QNLLKSQRILSRVELKRLCEIFTRMFADPHSKRVFSMFLETLVDFVTVHKDDLQDWLFVL
LTQLLKKMGADLLGSVQAKVQKALDITRESFPFDQQFNILMRFIVDQTQTPNLKVKVAIL
KYIESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQVVLIALFELNTPEFT
MLLGALPKTFQDGATKLLHSHLKNSSNTSSGVGSPSNTVGRTAPRHAPSRSSPLTSPTNC
SHGGLSPSRLWGWGVDGLLHAAPPAAPLPQCDPAAPGLRALRRAFSPSVTEYDTENMNAE
EIYSSLRGVTEAIQSFSYRSQEDLKEPLRRDGKRDDGVGREVVAPSPGPDGRPGLDVVEG
GRTALDNKTSLLNTPSPRSFSGPRSREFAPYGFGETICAYDKSALKEAVFDDDVEQFRDC
RQKDSGENKTSLPKGFCPVGPDHSDLVADLLKELSNHNERSEERRAALLELLKVTREDSA
PMWDEHFKTVLLLLLETLCDKDHTIRALALRVLKEILRNQPTRFRNYAELTIMKTLEAHK
DSHKEVVRAAEEAASTLAGSIHPEQCIKVLCPIVQTADYPINLAAIKMQTKVIERIAKDS
LLQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYAVIGEELKPHLAQLTGSKMKLLNLY
IKRAQTTNSNSSSSSDVSSHS
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atggagcccagtgtggagagctgcttggctcaggtcctgcagaaggacgtgggccggcgg
ctgcaggtgggacaggaagtcattgactacatcctggacaggaacaagtcccccgaattg
gagcaggaccagacggcgctggacaagatggtggacgccattgccagctcctgggtcaac
tccagcaacttcaaggtgaacctgctgggcctggacctcctgtcagctctggtgacccgg
ctccaggaccgtttcagaacccacatcggaacggttctgccgagcctgatggaccggctg
ggagatgccagggaccaggtgagggagcaggaccaggttctgctgctgaagatcatggag
caggccgcctctcctcagtacgtctgggaccggatgctgggaggcttcaagcataagaac
aatcggaccagagagggagtgtgcctgtgtctcatcgccacgctgaacacgtccggagcc
caaggcctgacgctgagcaagatcgtcccgcacatctgcagcctgctgggagaccccgtg
ggccaggtccgggacggcgccatgagctgcctggtggagatctaccgccatgttggggag
cgggtgaggctggacctcagcaagaagggccttccccagtcacggttgaacgtcatcttc
agcaggtttgatgaagtccagagatccgggaacatgttgccgtcttctggttctgataaa
aactttgaggatgaagactctgtggacggaggccgatcctcttcgtcgtcctcctccaag
gcgcctcctagtggacggagggcggtggtgagctctgtgagaaggcccagctctgcttcg
tccaccaagtccacaggaaaggaggcggctgctggagccgtcgatgaagacgactttgtg
aaggcgtttgaggacgtcccgccagtccagttctactccaacagggagctggaggaccaa
ctgaccaagatccgagacgttctatctgacgacaaacacgactgggaacagcgcgtggtg
gcgctcaagaaggtccgttctctcgtcctggccggagcgccagaccacgaaggcttccct
caccagctgcggctgctggaggcgccgctgaaactgtcggccaaagatctgcgttcccag
gtggtccgagaagcctgcatcacgctgggatatctgtccgccgtcctgcggaacaagttt
gaccacggagcggagagcgtgatgccgaccctgctcaacctggtaccaaacagcgccaag
gtcatggccacgtccggaatggccgccatccgcctcatcctcaggcacacccactaccct
cgcctcatccccatcatcaccagcaactgcagctccaagtctgtggctgtcaggaggcgc
tgctatgagttcctggacctcctgctgcaggagtggcacacgtcgaccctggagagacac
gtggccgtcctcaccgagaccgtccggaagggaatccacgacgccgactccgaggcccgc
tccatcgccaggaagtgctactggggtttccatggccactacagccgggaggcggagctt
ctgttccaggcgctggaggccacctatcagaaggcgctgcagtcgcacctgaagagctcc
gacagcgtcgtgtcgctgccgcagtccgaccgctcctcctcatcctcacaggagagcctc
aaccgacctctgtctgtgaagagcgtcatcggaggcagcatcaccagaagtaagctggcg
ggctccaggtcgtcggccacgccgggctccctgcagcgttcccgtagcgacatcgacgtc
aacgccgcctccagcgccaagtcccgcctgggaggcgtcccggcctcctcgccgttcagc
gccgccgccgccctgcccccggggtcctacgcctcgctagacggcgctgctggtaagagt
gacggtcgtgttcgtacgagaagacagagctccggcagcgtgggcggagccagtccgtca
gtagtggacagcagggggcggagtcgagctaaagtggtctcccagtcgcagcccggcagt
cgctccagctccccagggaagctgctgggccagaactacggccgcatcccccgggccgcg
gcgccgcccagcaccgccgcagagagacgcagcaggatcccccgcagccagggatgcagc
cgcgagaccagccccagcaggccgggcctggcccggagccgcatcccgcgccccagcatg
agtcagggctgcagccgcgacaccagtcgcgagagcagccgcgacaccagccccgctcgg
ggcttcgctcctctggcctccagacgccattcccgttccaccagcgctctgtcctcagca
gaaccccacggccagtcagatcgatacggtctgatccaccaagccaggatttctgcgtcg
gtgaacgccatgcgggtcctgaacaccggcaccgaggtggaggcggccgtggccgacgct
ctgctgctgggagactccaggaacaagaggaagccattgcggcggcgctacgagtctcct
gggatgtactccgatgacgacgccaacagcgacgcgtccagcgcctgctcggagcgctcc
tacagctccaggaacggaggcatcccccactacctgcggcagacggaggacgtggccgag
gtgctgaaccactgcgccagctccaactggtccgagaggaaggagggcctgctgggtctg
cagaacctgctgaagagccaaaggatcctcagccgggtggagctgaagagactctgtgag
atcttcaccaggatgtttgcagacccccacagtaagagagtgttcagcatgttcctggag
acgctggtggacttcgtcacggtgcacaaggacgacctgcaagactggctcttcgtcctg
ctcactcagctgttgaagaagatgggcgccgacctgctgggctcggtccaggccaaggtc
cagaaggctctggacatcaccagggagtcgttccccttcgaccagcagttcaacatcctg
atgcgcttcatcgtggaccagacccagacccccaacctgaaggtcaaggtcgccatcctg
aagtacatcgagtctctggctcgccagatggacccgaccgactttgtgaactccagcgag
acgcggctggcggtgtcccgcatcattacctggaccaccgaacctaaaagctccgacgtc
agaaaggcggcccaggtggttctgatcgcgctgtttgagctgaacacgccggagttcacc
atgctgctgggcgcgctgcccaagaccttccaggacggcgccaccaagctgctgcacagc
cacctcaagaactccagcaacaccagcagcggcgtggggtctcccagcaacacggtgggc
cggacggcgccgcgccacgcccccagcaggtccagcccgctcacttcccccaccaactgc
tcccacggcggcctgtctcccagtcgtttgtggggttggggggtcgacgggctgctccac
gctgcgccccctgccgcccccctgcctcagtgcgaccccgccgcccccggcctcagggcc
ctgcgccgagccttttcacccagtgtgacggagtacgacacggagaacatgaacgccgag
gagatctacagctcgctgcgcggcgtcaccgaggccatccagagcttcagctaccgcagc
caggaggacctgaaggaaccgctgcgccgcgacggcaagagggacgacggcgtgggaaga
gaagtcgtggctccgtctccaggtcctgatggtcgtccgggtttagacgtggtggaaggc
ggccgcaccgccctggataacaagacgtcgctgctcaacaccccgtcgccacggtccttc
tccgggccccggagccgcgagtttgccccctacggctttggagaaaccatctgcgcctac
gataagagcgcgctgaaggaggccgtgttcgatgacgacgtggagcagttccgtgactgt
cggcagaaagattcgggtgaaaacaagacgagtctccctaaaggcttttgtcctgtcgga
ccggaccattctgacctggtggcggacctgctgaaggagctgtccaatcacaacgagcgc
agcgaggagcggcgcgcggcgctgctggagctgctgaaggtcacgcgggaggacagcgcc
cccatgtgggacgaacacttcaagaccgtcctgctgctgctgctggagacgctctgcgac
aaggaccacaccatccgggccctggccctccgggttctgaaggagatcttgaggaaccag
ccgacccggttcaggaactacgccgagctgaccatcatgaagaccctggaggcccacaag
gactcccacaaagaggtggtgcgtgcggccgaggaggcggcgtccacgctggccggctcc
atccacccggagcagtgcatcaaggtgctgtgccccatcgtccagaccgccgactacccc
atcaacctggccgccatcaagatgcagaccaaggtcatcgaacgcatcgccaaagactcg
ctgctgcagctgctgcccgacatcatccccggcctgctgcagggctatgacaacacagag
agcagcgtccgcaaggccagcgtgttctgcctggtggccatctacgccgtgattggagag
gagctgaaacctcacctggcacagctgacaggcagcaagatgaagcttctgaacctctac
atcaagcgggcccagaccaccaacagcaacagcagtagctcctccgatgtttcctctcac
agttaa
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integrated database retrieval system
