Gambusia affinis (western mosquitofish): 122839533
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Entry
122839533 CDS
T07758
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122839533
Membrane trafficking [BR:
gaf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122839533
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
122839533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40
WD40_Prp19
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Lgl_C
Beta-prop_WDR19_1st
Synaptobrevin
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
122839533
NCBI-ProteinID:
XP_043987125
LinkDB
All DBs
Position
LG11:22338363..22453569
Genome browser
AA seq
1202 aa
AA seq
DB search
MSLAFDPVQKILAIGSRSGGVRILGRPGVDCYCQHESGAAVLQLQFLINEGALVTACADD
TLHLWNLRQRRPAVLHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIESFILSGYV
IMWNKAIELSTKTHPGPVVHLSDSPKDEGKLLIGFEGGTIVQWDLRAKKADFRIYYDEAI
HSASWHHEGKQFMCSHSDGSLTLWNLRNTTKPFQVTFPHGKIQKDGRKESCKPILKVEYK
TSRSSEPFVIFSGGLSYDKAGRRPALTIMHGKAITVLEMDHPIVEFMVLCETPYNNEVQD
PYAVVVLLEKDLIVVDLTQSNFPVFENPYPMDIHESPVTCTAYFADCPPDMIPILYSIGA
KNKKTGYSHKEWPIGGGTWTLGSHTYSEIIITGHADGSIKFWDASAFTLQMLYKLKTSKV
FEKPKQGEGRAAELGEEDPFAVQMVSWCPHSRIFCVVGISAHIILYRFSKYDANTQIVSL
EVRLQCEPEDIITPSENENNPCFSEPGSHSPQPHHQYPLSPDSRTPDGARDSIPCLKVKD
KTVRVPPGYQSDLVIQLLWVDGEPPQQITSLDLNSAYGLLAFGNCNGLAVVDYLQKTVIL
CISTLDLYGATDPYQRLTRSPRRNRQSTSEHCMRGLSNFYSDSKKRIRTSYQSLTELTDN
QQSIDMEKSKSPTSVHYPTSLHNDPRILPEPVASLRASHCSPVFYLLDNVKGPGRKLSLP
TDLKTDLDHVNGHCTSPTSQPCSAGKPRIPMGPEGPRLTRRGPGRPPFRKAQSAACMEIS
LPVSHTEGHASRRAMLQQLHGVTMYSHDEHHTTAAYCWNERESRENSFSRSRSSSVSSID
RDTKEAITTLQFGESYGRKSDALPTPCLWVGTSLGVVILIPLSIPTDHEERMEDPVTVGP
SGAVQMLKGSVLRFGFLDCNGALIQSPYEVWRDLNAPEDPDRPRRRKLVHFSPSSSQDAF
GEGHLAIVCSERQAKVFLMPSQSCLFVHNITESSFVLRADVISLCNSVCLACFCANGHVM
TLSLPSLRPLMDVNYLPLTDMRIARTFCFTNEGQALYLSSPTEIQRITYSQEMCDNLQEM
LGELFTPIETPEAQNRGFLKGFFGGNAHTFDREELFGEAAAGKASRSLAQHIPGQGGVEG
MKVAASGVVGELARARIALDERGQRLGELEDRTALMMTSAETFSKHAHELMLKCKDKKWY
QF
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgtctttggcctttgaccccgtgcagaagattctggccattggttcaagatcaggtggt
gtacgaatactgggccgaccaggggtggactgctactgtcaacatgagagcggagcagct
gttcttcaacttcagttcctcatcaatgagggggcgctggttacagcctgtgcagatgac
acactacacctgtggaatctgcgccagagacgaccagcagtcttgcattcactcaaattc
aacagagagaggatcaccttttgccacctgccctttcagagtaaatggctgtatgtgggg
acggagcgtgggaacacacacatcgtcaacattgagtcttttattttgtctggatatgtt
atcatgtggaacaaggccatagaactgtcaactaaaactcacccaggtcctgtagttcat
ctgagtgacagcccaaaggacgaaggcaagttgcttataggatttgagggtggaaccatt
gtgcagtgggacctccgggccaagaaggctgacttcagaatctactatgatgaggctatc
cattcagccagttggcatcatgaagggaagcagtttatgtgcagtcactcggatggcagc
ctgacgctatggaacctcagaaacactaccaagccattccaggtcaccttccctcacgga
aagatacagaaggatgggagaaaggagtcatgcaaacctatactcaaagtagagtacaag
acctcaaggagcagtgagccttttgttatcttctctggtggtctttcatacgacaaagca
ggacggcgaccagctttaaccatcatgcatggcaaggccatcacggttctagaaatggac
catcctattgtagagttcatggtcctctgcgaaactccatataacaacgaagtccaggac
ccttatgcagtggtggtactgttggagaaggacttgattgtggtggatctgacacaaagc
aactttcctgtgtttgaaaacccatatcccatggatatccatgagtctcctgttacctgc
acagcttattttgcagattgtccaccagacatgattcccattctctattcaataggagct
aaaaacaagaagactggctatagtcacaaggaatggccaattggtggtggaacatggaca
ttaggctctcacacttattcagaaatcatcatcacaggacatgctgatgggtcaataaaa
ttttgggatgcatctgcattcacactgcagatgttgtacaagctgaagacctccaaagtg
tttgagaagccaaagcaaggtgagggccgggctgctgagctgggggaggaagaccctttt
gctgttcagatggttagctggtgccctcatagtcgcatcttctgtgtggtcggcatctcg
gctcacattattctgtatcgcttcagcaaatatgatgccaacactcagatagtgtcctta
gaagtacgcttgcagtgtgagccggaggatattatcactccatctgagaatgaaaacaat
ccctgcttctcagagccaggctcccactcaccccaaccccaccaccaatacccgcttagc
cctgacagcaggacaccagacggtgctagagacagcatcccctgcctcaaagtaaaggac
aagacggtccgggtccctcctggctatcagtcagacttggtcatccagctgctgtgggtg
gatggtgaaccgccacagcaaatcaccagtctggacctcaattctgcatatgggctattg
gcgtttgggaactgtaatggtcttgcagtggttgactacttacaaaaaactgttatattg
tgtatttcgacactggatctatacggagccaccgatccctatcagcgccttactcgttcc
ccccgtaggaacaggcagtccacctcagagcattgcatgcgcggcctgtctaacttttat
tcagattcaaagaaaaggatccgtacatcctatcagagccttactgaactcactgacaac
cagcagtccatagacatggaaaaaagcaagtcacccacttcagttcattacccaacctcc
cttcacaatgatccacgcatcctgccagagcctgtggccagtctgagagccagccactgc
agtccagtcttttacttactggacaatgtaaagggacccggcagaaagttaagtctgccc
acagatcttaagactgatcttgatcatgtcaatggacattgcactagtcccacctctcag
ccctgctcggcggggaaacctcgcattccaatgggtcccgaagggccacggctaacccgc
agaggccctggccgaccacccttccgaaaggcccagtctgctgcttgcatggagatctct
ttgcctgtgtcccacactgaagggcatgcatcaaggagggcaatgcttcagcagttacat
ggagtcactatgtactcccatgacgagcaccacaccaccgccgcatactgctggaacgag
agagagagtcgtgaaaactccttcagccgctctcgcagttccagcgtgtctagcattgac
agggacaccaaagaagctatcaccacactgcagtttggagaatcctatggacgcaagagt
gatgccctgcctacaccatgtctgtgggtagggactagcttaggagtggtcatccttatc
ccactatcaatccccactgaccacgaggagaggatggaggaccctgtcactgttggccct
agtggagcagtccaaatgctaaaaggctctgtgcttcgctttggtttcttggactgcaat
ggagccctaattcagagcccatatgaggtttggcgggacctgaatgccccagaggaccct
gacagaccacggaggcgcaagctggtccacttttccccgtcctcttcccaggatgccttt
ggagagggacatttggccatagtttgctctgagaggcaggccaaagtcttcttgatgccc
tctcagtcttgcctctttgtccacaacatcacagagtcatcctttgtgcttcgagctgat
gtgatatctctgtgcaacagtgtgtgcctggcctgcttctgtgctaacgggcacgtcatg
acactcagtttgcccagcttaagaccgctgatggatgtcaattacctgcctctgacagac
atgcgcatagcaagaaccttttgtttcaccaatgaggggcaggcactgtatctcagctcc
ccgacagaaatccagagaattacatacagccaggaaatgtgtgacaacctgcaggaaatg
cttggggaactgtttactccaatagaaacaccagaagctcaaaacagaggatttttaaag
ggcttctttggaggaaacgcccatacttttgacagagaggagctttttggtgaggcggca
gctgggaaggcttctcggagtctggcacagcacatccccggtcagggaggtgtagaaggc
atgaaggtggcagcgagtggagtagtgggggagctggcacgggctcgtattgctctggat
gagagaggccagaggctgggggagctggaggaccggaccgctctgatgatgaccagtgca
gaaactttctccaaacatgctcatgagctgatgctgaagtgtaaggacaagaagtggtac
cagttctaa
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