Gambusia affinis (western mosquitofish): 122839544
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Entry
122839544 CDS
T07758
Symbol
sox21b
Name
(RefSeq) transcription factor Sox-21-B
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122839544 (sox21b)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122839544 (sox21b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
122839544
NCBI-ProteinID:
XP_043987158
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All DBs
Position
LG11:complement(14589598..14594493)
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AA seq
248 aa
AA seq
DB search
MSKPMDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFSFPVPYNLGEHDALKVSGLSAGALSDSV
IGNPDKAAAAAAAAAARVFFNPSMSANPYSFFDLGSKMTELSPPSFPYASPLGYPPGGAA
AFTGTGGVGGGTHTHTHSHPSPGNPGYMIPCNCTAWPSAGLQPPLAYILLPGMGKPQLEP
YPAYAAAL
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaccaatggatcacgtcaaacgcccgatgaacgctttcatggtctggtccaga
gcccagcgcaggaaaatggctcaggagaacccgaagatgcacaactccgagatcagcaag
cggctgggagcggagtggaaacttctcacggagtccgagaagaggccgttcatcgacgaa
gccaagcggctcagggcgatgcacatgaaggagcatccagactacaagtacagaccgagg
cggaagcccaagactttgatgaaaaaagataagttttccttcccggtgccctataatctt
ggggagcacgacgcgcttaaagttagcggactttccgcaggagcgctctccgactccgtc
atcgggaacccggacaaggctgcggcggcagcggcggccgcggctgcgagggtcttcttc
aacccgtccatgtcagcgaacccgtattcgttttttgacctgggatccaagatgaccgag
ctttccccgccttcctttccttacgcctctcctttgggttacccgccgggaggggcggca
gcgtttaccgggactggcggcgtgggcggtgggacacacacccacactcactcgcatccg
tcacccggtaacccggggtacatgatcccgtgtaactgtacggcctggccctcggcggga
ctccagccgcccttagcctacatcttgctgcccgggatggggaaacctcagcttgaacct
taccctgcatatgctgcggcgttatga
DBGET
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