Gambusia affinis (western mosquitofish): 122839611
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Entry
122839611 CDS
T07758
Name
(RefSeq) polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122839611
04091 Lectins [BR:
gaf04091
]
122839611
Ion channels [BR:
gaf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122839611
Lectins [BR:
gaf04091
]
C-Type lectins
Others
122839611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Ion_trans
GPS
Motif
Other DBs
NCBI-GeneID:
122839611
NCBI-ProteinID:
XP_043987289
LinkDB
All DBs
Position
LG11:complement(24111196..24134507)
Genome browser
AA seq
1542 aa
AA seq
DB search
MLDLMIGIVNESPAQTPEETQVVARGLTSLIQKDDELSLSAQIDAAALFANLSLSVLDMN
VSTAEDKENVITAASVIVEGVGMILEYSSNKNISDALLAALGIIQSTLLKTMTVNEGPII
IQKPSISLFVNRVNPESLHKESISANLSSQPTFSLPQLSSDMFPSDEPVDVRMLSLDKNP
FSWNKKGNISGLIGGLSLTKQDGSGIPVENLNEDIEILLPRPAGEQVNTSVLDLGNSSTT
AIDVPSADSTLLLKMVPSVDPLPFKLFLGYMDYPTDTKYVAMTEMPLPGTTQEERYTWLL
NPTNLKGNTGLHYLVVRPIVGPGVKSINATLSITPITSSCKFWNETLLDWKDSGCRVGVK
TTHLVTQCLCNHLTFFGSSFFVTPNLVDPSRTAELFATFAENPVVVCFVGALFVTYLLVV
VWARRKDIKDTLKVKGTVLEDNDPMDNYRYLLCVCTGHRIGASTSSQVVVTLLGADGNSR
PHHLTDPKKPVFERGAVDLFLLTTPSSLGELQGIRLWHNNSGNHPAWFVGNVLVQDLQTE
QKWYILCNSWLAVDMGDCCLDKLFPVSTEMDLKKFSNLFFMKTAKDFSDGHLWFSVISRP
PSSNFTCVQRVSCCFSLLLCTMLTSIMFYGIPTDPSDQVMDLGHFEFTWQQFMVGVQSSL
IMFPINILIVSVFRNTRPRESSCCQRKTKKASRCQQKSSVQTTSLKSGTTISSTGSSTLD
TTIKDIARILQSLSETTKCNIPSVKSEFGSGKETDINAVLAEVEEILKQNTKCSNDTQTK
TQCQLSAEGIEQKSSKIQHLYRQMCNLEKELSLMDPSSFPDPHSFNKALKQVQGLKSYLE
DQLFTSSHLDLDEPKHEKFVSEHDTSNDDGVLKKKPQHLGFLPWWFIFVGWLLVIGTSFV
SGYFTMLYGLKFGKERSISWLVSMIISFFQSLLFIQPLKVICLAVFFALVIKRVDEEDFQ
NVVFERSGRNSGDQKDKQTCHWDYHLYEPPPPADIERMKRNKIMEQKAFALLSEILIYMG
FMWMLLVVAYGQRDPNAFLLKQHIKNSFSDSVPDTMTLQDVFTWANTTLLQNLFGEYPGF
ITDGNSKLVGNARVRQVRVQQNSCQIAGFMLGLVPDCHAPYSWETEDTDSYDAGWNHSVK
NNISESASSPWMYQTEAELRSLPVWGRLVLYRGGGFVAELGPDIKNASSTLEYLFHNKWL
DKYTRAVFVEFTVYNANVNLFCIVTLLMETSAIGAFQFYSDLQAIRLYPSTGGLYLFVMA
SEIIYLLFILYYMFKQAKLLKQHRWLYLKNKWILLELSIILLSWSATAVFIQRTLLGNRD
MKFYQNHKDKFASFHETAAADSVLQYLVAFLVLLSTIKLWHLLRLNPKINLITAALHRAW
NDISSFLLIIGITLVAYSVASNVIYGWKISSYKTFFDSLLTIISLQLGIFNYDEVLDSYP
VLGGLLFGSCIVFMTFVVLNLFISVILVSLNLEQMYHKPSEEEEIVDLLLKKLCNLFGFR
YKSEKDSMEPDREGSSNLTLNKNRNILTNASVEDNIYQKSDY
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgttggacttgatgattggcatagttaatgaatctccagcacaaactccagaagaaact
caagtggtagccagaggacttacttctctcattcagaaagacgatgaactcagcttgtct
gcacagattgatgctgccgcattgtttgccaacctcagcttatctgtcctggatatgaat
gtgagcacagctgaagacaaagaaaatgttatcaccgctgcaagcgtcattgtggaagga
gtgggcatgattttggagtattcttccaacaaaaacatctctgacgctctgcttgctgct
ctggggatcatacagagcactttgttgaaaacaatgacggttaatgaaggtccaataata
atacaaaaaccttctatcagtttgtttgtcaatcgagtaaaccctgagagtttacacaaa
gagtccatcagtgctaatttaagttctcagcccacgttttcgctgccacaactctcatct
gacatgtttccatcagatgagccagtggatgtccggatgttgagtttagataaaaatccc
ttttcttggaacaagaaaggaaacattagtggactgataggtggtctgtccctcacaaaa
caagatggatccggtatccctgtggagaacttaaatgaagatattgagattctgttgcca
aggcccgctggagaacaagtgaacacttcagttttggatcttgggaactccagcacaaca
gccatagatgttccctcagccgactccactctgcttttaaagatggtgccttctgtggat
cctttacccttcaaactgttccttggttacatggattaccctactgacacaaagtatgta
gcgatgacagagatgcctcttccgggaactactcaagaagaaagatacacatggcttctt
aatcccacaaatttaaagggaaacactggattgcattatcttgtggtgaggcctattgtt
ggtccaggtgtgaaatctatcaatgccacattatctatcacccccattacatcctcatgc
aaattttggaatgagactctattggactggaaggattctggatgcagagttggtgtcaaa
accacacatttagtcacccagtgcttgtgcaaccacctcacattttttggcagctctttc
tttgtaactccaaatcttgtcgacccttcacgcactgctgagctttttgcgacctttgct
gagaacccagtggttgtgtgctttgttggggctctttttgtgacctacctcctcgtggtt
gtgtgggcacgaagaaaagacatcaaagacacactcaaggtgaaggggacagtgctggag
gacaatgaccccatggataattatcgctatctgttgtgtgtttgcactggacatcgcata
ggagcttccacctcctctcaggttgtagtcactcttctgggtgcagacggaaacagtaga
cctcatcacctgactgatccaaagaaacccgtgtttgagcgtggagccgtggatttgttc
ctgctgaccacaccatcctctttgggagagctgcagggcatcagactgtggcacaacaat
tctggaaaccatcctgcttggtttgtgggcaacgtccttgtgcaggatttacagacagag
cagaaatggtatattttatgcaactcctggctcgcagtagacatgggtgattgctgcctc
gataaactctttcctgtttcgacagagatggatctgaagaaattcagtaacttgttcttt
atgaagacagcaaaggatttcagtgacggacacctttggttctctgtgatcagtcgacca
ccgagtagcaactttacttgtgtgcagagggtgtcctgctgtttctcactgctactctgc
accatgctgaccagcatcatgttttatgggatcccaacagacccctccgatcaggtcatg
gatttgggtcattttgagttcacctggcagcagttcatggttggggttcaaagttccctc
atcatgtttccaataaatatcctcatagtcagcgtcttcagaaacactcgccctcgggag
tcgtcttgttgtcaaagaaaaacaaagaaagcaagtcgctgccagcaaaaaagcagtgta
cagacaacttctctgaaatcaggaactaccatcagcagcactgggagctccactttagac
accaccataaaagatattgcaagaattcttcagtccctgtctgagacaaccaaatgtaac
atcccatccgtcaagtctgagtttggttctggaaaagaaactgacattaatgctgtcctc
gccgaagtggaagaaattctcaaacagaataccaaatgcagcaatgacacccagacaaaa
actcagtgtcaactatcagccgaggggattgagcagaagagcagcaaaattcagcacctg
tacagacaaatgtgtaaccttgaaaaggagctgagcctgatggacccctccagcttcccc
gacccacacagcttcaataaggccctgaagcaggtccaggggctgaagagctaccttgaa
gatcagctcttcacctccagccatttggacctagatgagcctaaacatgagaagtttgtt
tctgagcatgacacttcaaatgatgatggtgttctgaagaaaaagccacagcatctgggc
tttctgccctggtggtttatctttgttggctggttgctggtgattggaaccagttttgtt
tcaggatatttcacaatgctttatggattgaaatttgggaaagaacgctccatcagctgg
ctggtatccatgatcatctccttctttcagagtcttctctttattcagccactgaaggtg
atatgtcttgcagttttctttgcactggtaataaagcgagtcgatgaagaagattttcaa
aatgtggtgtttgaaaggagtgggagaaattctggtgaccaaaaagataaacaaacatgc
cattgggattaccatctgtatgagcctcctcctcctgcagacatcgagagaatgaaaagg
aacaagattatggaacagaaggcctttgctttgctcagtgagattttgatttacatgggg
ttcatgtggatgttactggtggtggcctatggccagagagatcccaatgcttttttgttg
aaacagcacattaaaaatagcttctctgacagtgtcccagacaccatgactcttcaggat
gtttttacctgggctaacaccactctactccaaaacctttttggagaatatccaggattt
atcacagatggaaactccaagctggtggggaatgctcgtgttcgccaagtaagagttcag
cagaactcgtgtcagattgcaggtttcatgcttggattagtgccagactgtcatgccccc
tattcatgggagacagaagacactgattcctacgatgctggctggaatcactctgtcaag
aataatatttcggaaagtgcctcctctccatggatgtaccagactgaagctgaactcagg
agtctgccagtctggggacgactggtgctctacagaggaggaggatttgtagctgagctt
ggaccagatattaaaaatgccagcagcacacttgagtatcttttccataataaatggctt
gataagtacacgagggcagtctttgtcgagttcacagtttacaatgcaaatgtgaacctc
ttctgtatcgtcacgctcttgatggagacctcagccataggagcctttcagttctacagt
gatctgcaggctattcgtctttacccatcaacaggggggctttacttatttgttatggct
tctgagatcatttatttgcttttcattctctactacatgttcaagcaggccaaattattg
aagcagcatcgctggctttacttgaagaacaagtggatccttctggagctgagcatcatc
ctgctgagctggagtgccactgctgtttttatccaaaggactctgcttggaaaccgtgat
atgaaattctaccaaaaccacaaagacaaatttgccagttttcatgaaactgctgcagcc
gattcagttcttcagtacttggttgctttcttggttcttctgtccactataaaactgtgg
caccttctcagactgaaccccaagataaacctgatcactgctgcactgcatcgagcatgg
aatgacatctcaagttttctgctcatcatcgggatcacgctagtggcgtactcagttgca
agcaacgtgatttatggctggaagatttcatcttacaaaactttctttgattctcttctg
accatcatcagtctgcagttgggcatctttaactatgatgaggttttggacagttaccca
gtgcttggcggattgctgtttggttcctgtattgtcttcatgacgtttgtggttctaaat
ctcttcatttcagtgattcttgtatcgctaaacttggagcaaatgtatcacaagccctct
gaagaagaagagattgttgacctcctgctgaagaaactctgcaacctgtttggtttcaga
tataaaagtgaaaaagactccatggagcctgacagagagggcagcagcaacttgaccctt
aataagaacaggaatattcttactaacgcctcagttgaagacaacatttatcaaaagtct
gactactaa
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integrated database retrieval system
