Gambusia affinis (western mosquitofish): 122839636
Help
Entry
122839636 CDS
T07758
Symbol
spopla
Name
(RefSeq) speckle-type POZ protein-like A
KO
K10523
speckle-type POZ protein
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
122839636 (spopla)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122839636 (spopla)
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
122839636 (spopla)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_2
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
122839636
NCBI-ProteinID:
XP_043987357
LinkDB
All DBs
Position
LG11:22137561..22152845
Genome browser
AA seq
392 aa
AA seq
DB search
MSRVPTPPPPGEMSSGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNMNMLK
VPECQLSDDLGNLWECSRFTDCSLYVGGQEFKAHKSILAARSPVFNAMFEHEMEESKKNR
VDISDVDPDVFREMMGFIYTGKAPNLEKMADNLLAAADKYALERLKVMCEEALCNSLSVE
NVADTLILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNHATDIMETAGWKSMI
QSHPHLVAEAFRALASAQCPPFGLPRKRLKQS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgggttcccacccctcctcctcctggggagatgtcaagtggacctgtggcagag
agctggtgttacacacaggtcaaagtagtgaaattttcctacatgtggaccataaacaac
tttagtttttgcagagaagaaatgggagaggtgttgaagagttcgaccttctcttctggc
cctaatgacaaaatgaaatggtgtctgagagttaatccaaagggacttgatgatgaaagc
aaagattatctatcactgtatttacttcttgttagttgtccaaaaagtgaagtcagagca
aaatttaagttttctttgttgaatgctaaaagagaggaaacaaaagcaatggagagccaa
agagcatataggtttgtccaaggcaaagactggggcttcaaaaaatttataaggagagat
tttctccttgatgaagctaatggtctcttacctgatgacaagctcacacttttctgtgag
gtaagtgtcgtccaggactctgtcaacatttcgggtcagtctaacatgaacatgctgaaa
gtaccagaatgtcagctgtctgatgaccttgggaacctgtgggagtgttcacgcttcaca
gactgcagcctctacgtgggaggccaagagttcaaagcccacaaatccatccttgcagcg
aggtctccagtctttaatgcaatgtttgaacatgaaatggaagagagtaaaaagaatcga
gttgacatcagtgatgtggatccagatgtctttagggaaatgatgggcttcatttataca
gggaaggcaccaaacttggaaaaaatggcagacaatttgctggcagctgctgataaatat
gctctggagcgtttaaaggtcatgtgtgaggaggccttgtgcaacagcctttcggtggag
aatgtggccgacaccctcatcttggctgacttgcacagtgccgagcaactcaaagcacaa
gccatagattttatcaacaggtgcagtgtcctgagacagctgggctgtaaagatggaaag
aactggaatagcaatcacgccacagacataatggagaccgcaggctggaagtcaatgatc
cagtcccatcctcacttggtagctgaagccttccgtgccctggcttccgcacagtgccca
ccctttggtcttccaaggaagcgcctaaaacagtcctga
DBGET
integrated database retrieval system