Gambusia affinis (western mosquitofish): 122839729
Help
Entry
122839729 CDS
T07758
Symbol
si:dkey-230p4.1
Name
(RefSeq) trichohyalin isoform X1
KO
K16464
centrosomal protein CEP250
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122839729 (si:dkey-230p4.1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gaf03037
]
122839729 (si:dkey-230p4.1)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
122839729 (si:dkey-230p4.1)
Cilium and associated proteins [BR:
gaf03037
]
Other cilia and associated proteins
Other cilium assembly proteins
122839729 (si:dkey-230p4.1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
Motif
Other DBs
NCBI-GeneID:
122839729
NCBI-ProteinID:
XP_043987570
LinkDB
All DBs
Position
LG11:25664303..25683370
Genome browser
AA seq
2467 aa
AA seq
DB search
MFLAVNRYVVTVTPPVRRRRYGNYGRLFSFGVRVKSMESKLLNGWQQQKTELEVEVCRLQ
EDLAESRAEKEELESRSKALTDRLCQTLNPSMSLLDEDQRRWKTKLKEGREREARQALLI
HRLQNKVIEYRERCHRLDQQLQENHSRVLISEQRIKDEHSQSLENALISLEEEQQRSTSL
ADTNALLRHQLSQSEQTNQELVEDLQKLTADWTRAVQEAQQKEADCQKEKECRWGHVGQQ
QARLLSLWKSVLDLRRQCHTLRTAADRDLWQLRAEFSRLSSSLLCSCDSVCSSLRLRAPE
IKPASSDLPAPSYSSPPLSSTLIHPPPDFSGSPLCSHSPFPLGLFTLGEEEEVEEEEEEK
PLELKLQHEVEVFQLEQRIDELSHSLQTADRAKEASEAEVERLRESERTLQSVGHAVIRM
FRSLSRISNQTPSVSTDSVLSLDMSSLLSVLSQTESMLQWKHEELQGAELSLRRFSEEQK
SLQLHLKQLEEEKEQLDMKTGNIQQELKHTLDSLSREKEASTSLRLQVEEGQLRGEEVKR
EIDRLRRERDRMEERTRELEAERYKRVEAELLENVQLSERETQQRIEIHSLKVMLEREQL
DRQRAEEEGADAREALKKCRESVLHLSSSETLLKREVQEARDALEKVSALNSSLATDKRD
LNMQLLKLETELSDSQSQLQTLRSEVSVLQRDIKSLRSECSLLRVQSETDADVIHQLKER
RSHLERNVEEKEKELSSLKEEKKTTDQQLDEFSSQHTLVREVLKEMQEQLWKMEEQLNQT
EKQKEELQKESKKLQEEQEVQRRYKEQLEEELQEQRSVSVNLHLQLRLQQQQLSQSEVDR
CQQNTHICTLQQAKATLQGEIECLRGELQRETARREDEREQKERMLEEKKEVKVGMERLT
EEVKELQTRRTEEDAKWKEEKELWQREREVLNKELGMRDGEVEALRRRTEGLMEEVEERQ
REVEKLREEVAEGVTEISFTMERLQRVEVEKENLEEQAKRKEVSLEEEKVKRREEENQRD
LETEALCERIEKLETEKITMEEELYLLRREKEERQSERAVADEEISRLRKEISFLQGEDR
RQREKQQEELEEQLKEKVGEVELLKVKLNVAQEEYEEMKEEVERRERGLERQISAVRDRE
EEVEELKESLRLTEEQKEEVERERQAVCHKLKQKEAREEQLEALLTETQALLEKEKQERG
EKEKMITSLGKELQEAQAEREGANKRVREKEEVCEQLQEEVRMWEQTGEHSNKEVKKLQK
INKELQEAVQKLTATLEEREEEWKEKGNARVKEEKKLNKVIEEQQEEVQQLKAALEEKEE
KVREWKEKADLSGKEEKKLSKIVKERAEEVKQLRASLEEVEELKETLRQTEKQKEEEERE
RQAVCHKLKQKEVQEEQLGALLIETQALLEKEKGEKEKMISSHSKKLKEAQAEKEGANEK
VREKEEACERLQEELRRWQQTAEHSDKEVKKLQKVIKDLQEVVQKLTVTLEERKQEWKEK
AEVSAKDERKLHRVIKERQEEVQQMKAALEEKEEEVREWKEKADMSVKEEKKLNKVVKDR
VEEVKQLRATLEKKEEEVREGERCRRIEEEKRRRTEEKVREVEQELEKEKEVLSTVREER
RRLEDRMEAKEKEQEGKLKEMEEQSNVLRMKEEKLRRLEEELSEVKEEQKVQQEAEKELH
LEEERRRSRLRELEEEKAKLLVELQSKEMEVTGLAEEVQRKTEELSELREEVQRKQMEKE
EELRSREEELIKSKREVYELREELYKEQREKEEKQEQLRSFEKDMVALREEMQKEKRQEK
EERRLMEEMQIKQQEKEAAYEAEREELRRREEEWRSKELMINQMAQAERRQMEEVLEELI
SSKREVSALRDEMNKEQRANQEKLRMFEEEVIKEQMEKEEKQEKLRKFEKEVTELKVELL
KELQEGEKIRDELMKRKQEVEEEVKRTKDALKVIIEEVKREKEQLKEKLTRTEMEVGTVK
EAHRRSEKEVLLLKEELQKEQKKKLETQEKLKESREDILDLTEEAKKERQRREQVQEELR
GVQQNVEVMEESLSSLRSQVWNLSLGQEQAQNELKEKEEQNQELKDGLRVALKEMSQLEV
RLKESHAEGERLKTALVEKKKEMDKIREESQKVANEELDKQGELEELRARVKSLKRRKSE
TLEELDNAEKRMKEAERKWKSQVEQMAKEQVVKLNALNTEIQILRRKQEQVETEWRSRVE
EKEEEIEKARMELQESQTELNRCKTLTEEQKNQLYVLTQSNKQLEADRDRVRVALERTES
AMIGYRERAHQQVQNPGAVPRSEEGDRLLILQHQVAELELNQKRMDKKNSRLESQKDKLK
KDRSLLKDTLKQVEEERSRLQQQLSLSSKTQARQSSENTADVARTVKELEDQVNLLRISL
AVEQEQKADFIEQSSRNSEWLLSMRQDLNDSLAAVSRRPIPAVLESETQRLDRSLREEDL
RMSLSQS
NT seq
7404 nt
NT seq
+upstream
nt +downstream
nt
atgtttctagcagtaaaccgttatgttgttaccgttacccctccggtcaggaggcgtcgc
tatggaaactacgggcggttgtttagcttcggtgtccgggtaaaaagcatggagtcaaag
ctgctgaatggctggcagcagcagaagacggagctggaggtggaggtgtgtcgactgcag
gaggatctggcggagagccgagctgagaaggaggagctggagtccaggagcaaagctctg
acggacaggctttgccagactctgaatccttcgatgtccctgcttgatgaggatcagagg
aggtggaaaacgaagctgaaggagggaagggagagggaggccagacaggcgctgctgatc
caccgcctgcagaacaaggtgatcgagtacagggagcggtgtcaccgtctggatcagcag
ttgcaggaaaatcactccagggttctgatctctgagcagagaatcaaagatgagcacagc
caatctctggagaacgccctcatcagtctggaggaggaacagcagaggtccaccagtctg
gctgacaccaacgctctccttcgccaccagctcagccaatcagagcagaccaaccaggag
ctggtagaagacctccagaagctgactgctgattggacgagagccgtgcaggaggcgcag
caaaaagaggccgattgccagaaagaaaaagagtgtcggtggggtcacgtgggtcagcag
caggcccggctgctgtcactctggaagtcagtgcttgatctgaggcgacaatgtcacacg
ctgagaacagctgctgacagggatctgtggcagctcagggcggagttttccagactctcc
tcgtctctcctctgcagctgtgactccgtctgctcctcactgaggctcagagcccctgag
atcaaacccgcctcctctgatcttcctgctccgtcatactcatctcctcctctgtcctcc
actctcatccaccctcctccagacttctcaggctctcctctttgttcccactcacctttc
cctctggggttattcaccttaggagaggaagaggaggtggaggaggaggaggaggagaag
ccattggagttgaagctccagcatgaagtggaggtgttccagctggagcaaaggatcgat
gaactcagtcactccctgcagacggcagacagagcgaaggaggcgtcggaggcggaggtg
gagcggctgagggaatcagagaggacgctgcagtcggtcggtcatgctgtcatcaggatg
ttccggtccctgagcaggatcagcaaccagacgccaagcgtctctacagacagcgtcctc
agtctggatatgtcctcccttctgtcggttctgtctcagactgagagcatgctgcagtgg
aaacatgaggagctgcagggggcagagctaagtctgcggcggttcagcgaggagcaaaag
tctctgcagctccacctgaaacagctggaggaagaaaaagagcagctggacatgaaaact
gggaacatacagcaagaactgaaacacacactggactctctgagcagggagaaagaggcg
tccacctccctgcgtctgcaagtggaggaggggcagctgagaggggaggaggtgaagagg
gagatcgacagactgaggagagagagagacagaatggaggaaagaacccgagagctggag
gcagaaagatacaaacgggtggaggcggagcttctggagaatgtccagctgtcagagaga
gaaactcagcagcggattgagatccacagcctgaaggtgatgctggagagggagcagctg
gacaggcagagagcagaagaagaaggtgctgatgccagagaagccttgaagaagtgcagg
gagtctgtgctgcacctctcctcctcagagacgttgctgaaaagggaggtgcaggaggca
cgggatgccctggagaaagtgtcggctctgaactcgtctctggccacagacaaacgagat
ctgaacatgcagctgctgaagctggagacagaactgtcagacagccagtcacagctgcag
actctgaggtcagaggtcagcgttctgcagagagacattaaaagtctgaggagtgagtgc
agcctcctgagagttcagtcggagacggatgctgatgtcattcatcagctgaaggagcga
cgctcacacctggagagaaacgtggaggagaaggagaaggagctgtcctccctgaaagag
gagaagaagaccacagatcagcagctggacgagttttcctcccagcacaccctggtacgc
gaggtgctaaaggagatgcaggaacagctgtggaagatggaggagcagctgaatcagacg
gagaaacagaaggaggagctgcagaaagaaagcaagaagctgcaggaggaacaggaagtt
cagaggagatacaaggagcagctggaagaggagttacaggagcagaggtccgtgtcggtg
aacctccacctgcagctccgtctgcagcagcagcagctctcccagtccgaggtggacaga
tgtcagcagaacacacacatctgtacgctgcagcaggccaaagccaccttgcagggtgag
atcgagtgtctgagaggagaacttcagcgagagacggcaagaagagaagatgagagggag
caaaaggaaagaatgctggaggaaaagaaggaagtgaaagtaggaatggagaggctgaca
gaggaggtgaaggagctgcagaccagaaggacggaggaagacgccaagtggaaggaggaa
aaggagttgtggcagagagaaagagaagttctgaacaaagagctcggcatgagagatgga
gaggtggaggccctgaggaggcgcacagagggactgatggaggaggtggaggagaggcag
agagaggtggagaaactgagggaggaggtggcagagggagtgactgagatcagcttcacg
atggagagactgcagagagtagaggtagagaaggagaacctggaggagcaagcaaagagg
aaagaggtcagtctggaagaagagaaggtgaagaggagagaggaggagaaccagagggat
ttagagacggaggcactgtgtgaacggatcgagaagctggaaacagaaaagataacaatg
gaggaagagctctatctgctgaggagagagaaggaggagaggcagagcgagagagctgtg
gcggatgaggaaatcagcaggctgagaaaagaaatctcctttttacagggggaggacagg
agacagagggagaaacagcaggaggagctggaggagcagctgaaagaaaaagttggggag
gtggagctcctgaaggtgaagctgaatgtggctcaggaggagtatgaagagatgaaggag
gaggtggagaggagggagcgcggcctggagcgacagatcagtgctgtcagggacagagag
gaggaggtggaggagctgaaggagagcctgaggctgactgaggagcagaaggaagaagta
gaacgggaacggcaggcagtctgtcacaaactaaagcagaaggaggcgcgggaggagcag
ctggaggctctgctgacagagactcaggcactccttgagaaggagaaacaagaaagagga
gaaaaagagaaaatgataacctccttgggcaaggagctgcaggaggctcaggctgagcga
gagggagcaaataagagggtcagagagaaggaggaggtctgtgagcagcttcaggaggag
gtcaggatgtgggagcagacaggagagcacagtaataaggaggtgaaaaagctccagaaa
atcaataaggagctacaagaggcagtgcagaagctgacggccacactagaggagagagag
gaggagtggaaggagaagggaaatgcgagggtgaaagaggagaaaaagctcaacaaggtc
atagaagagcaacaagaggaggtgcaacagctaaaggctgcattagaggagaaggaggag
aaggtgagggagtggaaggagaaggcagacctgagtgggaaggaggagaaaaaactcagc
aagatagttaaggagagagcagaggaggtgaagcagctaagggcctcactggaggaggtg
gaggagctgaaggagactctgaggcagacagagaagcagaaggaggaagaagaacgggag
cggcaggcggtctgtcacaaactgaaacagaaggaggtgcaggaggagcagctgggggct
ctgctgatagaaactcaggcgctcctcgagaaggagaaaggagaaaaagagaaaatgatc
tcctcccacagcaagaagctgaaggaggctcaggccgagaaagagggagcgaatgagaag
gtcagagagaaggaggaggcctgcgagaggctgcaggaggagctgaggaggtggcagcag
acagcagagcacagtgataaggaggtgaaaaagctccaaaaggttattaaggacctacaa
gaggtggtgcagaagctgacggtcacactagaggagagaaagcaggagtggaaggagaag
gcagaggtgagcgccaaggacgagagaaagctccacagggtcatcaaggagcgacaagag
gaggtgcagcagatgaaggcagcgctggaggagaaggaggaggaggtgagggagtggaag
gagaaggcagacatgagtgtaaaggaggagaaaaaactcaacaaagttgttaaagacaga
gtagaggaggtgaagcagctgagggcaacactggagaagaaggaggaggaggtgagagag
ggggagaggtgcagaaggattgaggaggagaagaggaggaggactgaggagaaggtgagg
gaggtggagcaggaactggagaaagagaaggaggtgctgagcacagtgagggaggagagg
aggaggttagaggacagaatggaagcaaaggagaaggagcaagaagggaagctaaaagaa
atggaggaacagagtaatgttctgagaatgaaagaggagaaactgagaagactggaagag
gaactgagcgaggtgaaagaggagcaaaaggtgcaacaggaagctgagaaagagcttcat
ctggaggaggagaggaggagatccagactgagagagctggaggaggagaaggcaaaactg
ctggtggagctacagagtaaggagatggaggtaacaggtcttgcagaggaggtgcagaga
aagacagaggagctatctgagctcagagaggaagtgcaaagaaagcaaatggagaaggag
gaggagctgagatcaagagaggaggagttgattaagagtaaaagggaggtgtatgaactg
agagaagagctgtataaggagcaaagggaaaaggaggagaagcaggaacagctgaggagc
tttgaaaaggatatggttgctctcagagaggaaatgcagaaggagaagagacaggaaaag
gaggagaggaggctgatggaggagatgcaaataaagcaacaagagaaggaggcggcctat
gaagcagagcgggaggagcttagaaggagggaggaggagtggaggtcaaaggagttgatg
atcaaccaaatggcgcaggcggagaggaggcagatggaggaggtgctggaggagctgata
agtagcaaaagggaggtgtctgcactgagagacgagatgaataaggagcaaagagcaaat
caggagaaattgaggatgtttgaggaggaggtgattaaagaacaaatggagaaggaggag
aagcaggagaagctccgaaaatttgagaaggaggtgactgaactcaaagtggagcttctg
aaggaactccaggagggggagaaaatccgagatgaactgatgaagaggaagcaggaggtg
gaggaagaggtcaagaggaccaaggatgcattaaaagtcatcattgaggaggtgaaaaga
gagaaggagcagctgaaagagaaattaacaaggacagagatggaggtggggactgtaaag
gaggcccacaggaggagtgaaaaggaggtgttactgctcaaagaggaactccagaaggag
cagaagaagaagctggagactcaagagaagctgaaggaaagtagagaagacatcttggat
cttacagaggaagcaaagaaggagcgccagaggagggagcaggtgcaggaggaattgaga
ggtgttcagcagaacgtggaggtgatggaggagagcctgagctccctgcggagtcaggtg
tggaatctgagcctgggccaggaacaagctcaaaatgagctgaaggagaaggaggagcag
aaccaggagttgaaggatggccttagggtggccctgaaggagatgtctcagctggaggtt
cgcctgaaggagagccacgctgagggggagcgtctgaagaccgccctggtggagaagaag
aaggagatggacaaaatcagagaggagagtcagaaggtggccaatgaggagctggataag
caaggagaattggaggagctgcgagccagagttaagagcctgaagaggagaaaaagtgag
acgttagaagagctggacaacgcagagaagaggatgaaggaggctgagaggaagtggaag
agtcaagtggaacagatggcgaaagagcaggtggtgaagctgaacgctctcaatacagaa
atccagatactgcggaggaaacaagagcaggtggaaacagagtggaggtccagggtggaa
gagaaggaggaggagatagagaaagcgagaatggagttgcaagagagccaaaccgagctg
aacaggtgcaaaaccttaacagaggagcagaagaatcagctctacgtactgactcaaagc
aacaagcagctggaggcagacagggaccgggtccgagtggccctggagcggacagagtca
gccatgattggttacagggagagagcgcaccaacaggtgcagaaccccggggcagttcct
cgctcagaggagggtgacagactgttgatcctgcagcatcaggtggctgaactggagctg
aaccaaaaacggatggacaagaagaattcccgtctggaaagccagaaagacaagctgaag
aaagacagaagtcttctcaaagacacgttgaaacaggtggaagaggaaagatcgaggctc
cagcagcagctttccctcagctctaagactcaggcgagacagtcatctgagaacaccgct
gacgtagcgcgtaccgtgaaggagctggaggaccaggtgaatcttctccgcatctcgctg
gctgtggagcaagagcagaaggcggactttatcgagcagtcgtccagaaatagcgaatgg
ctgctctcgatgaggcaggacctgaacgattcgctggccgccgtctcacgccgtccaatc
ccagcagtcctggagtccgagacgcagcgattggaccgcagcttgagggaggaggacctt
aggatgtctctgagtcaatcatag
DBGET
integrated database retrieval system