Gambusia affinis (western mosquitofish): 122839837
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Entry
122839837 CDS
T07758
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122839837
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
122839837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
zf-CCCH_2
UBA_N4BP1_C
Omega-toxin
Motif
Other DBs
NCBI-GeneID:
122839837
NCBI-ProteinID:
XP_043987746
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All DBs
Position
LG11:4676559..4700836
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AA seq
897 aa
AA seq
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MGLKDHLEDGTGHMLSLGLDLDYLHVDGAEKQTPPNPLKASDVSQVRGGAQSRSGYSIGG
STNSLSTNLSYSSSSSNFSEESAISDNEEEQHRASSDCGLDVSHRDQLGSPRSSSLQWKQ
VRLDLAPHPSTGDPTRSKALAPAELVSDCRAKVEFALKLGYAEDLVLLVLRKLGPDALIN
DMLGELVKLGTKTEMEQQKGPAASQSPSSSSSSLASSSSLESCRLPSPSPLLEDRDNFRP
VVVDGSNVAMSHGNKEVFSCQGIQLAVDWFLDRGHRDITVFVPAWRKEQSRPDALITDQE
ILRRLEKDKILVFTPSRRVQGRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKPEWK
KFIDERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVAPEPRKQPCPYGKKCTYGHK
CKFYHPERGSQPQRSVADELRASARNSSVTSRGLLEHTMMAKSQRSRQPEEMPEADPGQG
SKLPNQSPRSAPSDLTEDRLQSYSKPEAYKGNHVIGGHTSSGLSNSLGHLDSWAQLEESS
GAYSLGLVENYNRCDSPEAGCRSLVKAYSSLRLVVPQAPESLLTADLQAGSLPSECSSDG
SISSDSFPPDSMSDNSPKCQLHLLHYHHHYNGSYGHVASRVPPGMGQHSPYGYSVTQRPQ
RPPGSVSEELPCSVSFHASPRHRKTPSANVVPQHQHLLLGNYLGEQPPRLPQTSAPHPHS
QNAPFGPNASTSWEGDLQDSTMYKGSPVNCRRNYSGSTRHPQHKTHWDSHHEPSTRPCYD
LFSYKSFPPLHGKGWHTPWGQQLPSSPHSVSAPSVPPPPQQSLRSMATHRSHLQNERLYS
GHLSSGQYQDLRERVFVNLCAIFPPDLVRKVMAKNPHMTDAQELAASILMEKLQHVS
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaggaccatctggaggatggaactggccacatgctcagcctggggctggac
ctggactacctccatgtggatggtgctgagaagcagacgcccccaaacccactgaaggcc
tccgacgtctcgcaggtccgaggcggcgcccagagcaggagcggctacagtatcggcggg
agcaccaacagtctcagcacaaatctgagctacagcagcagcagcagcaatttttcagag
gagagcgccatttccgacaatgaagaagaacagcatcgggcgagctccgattgcggactc
gacgtctcccaccgagatcagctgggctcaccgcggagctcctccctgcagtggaagcag
gtcaggctggacctggcgccacacccgtccactggagatccaacgcggtcgaaagcgctg
gcgcctgcggagctcgtttcggactgccgcgccaaggtcgagttcgctctgaagctgggc
tacgccgaggatctggtgctgctggtcctgaggaaactgggcccagacgctcttattaac
gacatgctgggagagctggtcaagctggggacaaagacggagatggagcagcagaaaggg
ccggccgcgtcccagtctccttcctcctcttcgtcttctttggcctccagctcgtccctg
gagtcctgccggctgccgtccccttcgccgctgctggaagacagagacaactttcggccc
gtcgtcgtagacggcagcaacgtcgccatgagtcatggaaataaggaagtgttctcgtgc
caagggatccagctggctgttgattggttcttggatcgaggtcaccgtgacatcacggtt
tttgtccccgcctggagaaaggagcagtcgcgacctgatgctctcatcaccgatcaagag
atcctgaggcgactagagaaagacaagatactggttttcactccatctcggcgcgtgcag
gggcgacgtgtggtttgctatgacgacagattcatcgtcaaactggcatacgaatccgat
ggcataatcgtttccaatgacaactacagagacctggccaacgagaagccagagtggaag
aagttcattgacgagcgcctgctgatgtactcctttgtcaacgacaaattcatgcctcca
gatgatcctcttggacgccatggaccaagcctggaaaatttcctgaggaagaggcctgtt
gcccctgagcccaggaagcagccctgtccttatgggaagaaatgcacatatggccacaag
tgtaaattttaccacccagaaagaggcagtcagccccagcgctcggtggccgatgagctc
cgagccagcgccagaaattcgtcagtaacttccagaggcctgctggaacatacaatgatg
gcgaagagccaacgtagccgtcaaccagaagagatgcctgaagccgacccgggacagggc
agtaaactaccaaaccagagtcctcggagtgcgccctctgatctcactgaggacagactc
caaagttattccaaaccagaagcgtacaagggaaaccacgtcatcgggggacatacttca
tcagggttgtccaactcattgggacatctggacagctgggcgcaactcgaggaaagcagt
ggagcatacagtttgggtttagtcgaaaattacaacagatgtgactctccggaggcgggc
tgcaggtctctggtaaaggcctattcaagtctccgtcttgtggtgccacaggcccctgaa
agtctcttaactgctgatctgcaagcaggttctctgccatccgaatgcagcagcgatggc
agcattagctcagattcttttccgcccgactctatgtcagacaacagccccaagtgccaa
cttcaccttcttcactaccatcatcactataatggctcgtatggtcatgtggcaagccgg
gttccccctggaatgggccagcattccccttatggttactctgttactcaaaggccgcag
agacctccagggtccgtctctgaggaacttccttgttcagttagctttcacgcatctccg
cgccatcgcaagaccccttcagcaaacgtcgtaccacagcatcagcatctacttttaggc
aactatctgggggaacaaccacctcgtctacctcaaacgtctgctcctcatcctcattcc
cagaacgcgcccttcggtccgaacgcgtcgacttcgtgggaaggtgacctccaggactcc
acaatgtacaaaggatcaccagttaactgtagaagaaactactctgggtcaacccgacac
cctcagcataagacgcactgggattcccaccacgagccatcaaccaggccctgctatgat
ctgttttcctacaagagctttcccccacttcacggcaagggttggcacaccccctggggt
cagcaactcccatcatccccccacagtgtatcagctcctagtgtcccaccgcccccacag
cagtccctcaggtccatggccactcacaggagccacctgcagaacgagcgcctctactcg
gggcatctttcctcgggtcagtaccaggacctaagggagagggttttcgtcaacttgtgc
gccatcttcccaccagatttggtgaggaaggtgatggccaaaaaccctcacatgacggat
gctcaagagcttgcagcctcaattttgatggagaaattgcagcacgtttcttaa
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