KEGG   Gambusia affinis (western mosquitofish): 122839951
Entry
122839951         CDS       T07758                                 
Symbol
hcfc1b
Name
(RefSeq) host cell factor 1b
  KO
K14966  host cell factor 1
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf03083  Polycomb repressive complex
gaf04980  Cobalamin transport and metabolism
gaf05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    122839951 (hcfc1b)
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    122839951 (hcfc1b)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    122839951 (hcfc1b)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:gaf01009]
    122839951 (hcfc1b)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gaf03036]
    122839951 (hcfc1b)
   03029 Mitochondrial biogenesis [BR:gaf03029]
    122839951 (hcfc1b)
Protein phosphatases and associated proteins [BR:gaf01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     122839951 (hcfc1b)
Chromosome and associated proteins [BR:gaf03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    NSL complex
     122839951 (hcfc1b)
   HMT complexes
    COMPASS/SET1 complex
     122839951 (hcfc1b)
    MLL-HCF complex
     122839951 (hcfc1b)
   Polycomb repressive complex (PRC) and associated proteins
    PR-DUB complex
     122839951 (hcfc1b)
Mitochondrial biogenesis [BR:gaf03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    122839951 (hcfc1b)
SSDB
Motif
Pfam: fn3 Kelch_5 Kelch_3 Kelch_6
Other DBs
NCBI-GeneID: 122839951
NCBI-ProteinID: XP_043987976
LinkDB
Position
LG01:complement(41394193..41401343)
AA seq 1099 aa
MKSPHKDSMTNVCVCVCVRMYVFGGWVPLIEDDVKMGTHEKEWKCTNNLACLNLETMCWE
TVLMDGDEENLPRARAGHCSVAINSRLYIWSGRDGYRKAWNNQVCCKDLWYLETECPVAP
SRVQLVRANTSSLEVSWGPSKTADTYLLQLQRYDIPATPGSAPAATTPASHAVPPPGSPS
AAAVLKMATLSAGVRVSPPAQPSQTPIGSNPQMSGMAALAAAAAVTQKIPPSSAAVLGAL
KTVNNPATRLLKTAAAQVGGVSVVPAHTPQNRPIITVHKSGSVMVSQQPQVVTTVVGGVT
KTITIVNSPISLGGGGALIGNLGNLGKMVSMVQTRPVQSAVVTGQAGSSPVTQILQTKGA
LPAGTILKLVSAADGKQTAIISTAQAGSNKPAIIKTIPLSALQGAAGGNSPITILSSKVG
TPGTEKLINAVPRMSAGQQGVTQVVLKGAPGVAGTILRTVPMSGIRLVSPAAAGTKLVVK
GTTGVSSLGTGTGNVSVALLGGASLTTPTASLASQVATATASGPRQVTLITTPSGAEPQP
LVQDLPVSFMASPTSEEPGSTTGTTTTTNAEGDPATAVTLVCSNPPCETHETGTTNTFTT
AGAGRVQQVCSNPPCETHETGTTNTATTATAQQSGDGLHGDATDSAPSSETAVSQSAAVT
TVTHATPTPGPSVPDLSSLVGGERAEASETLAMATGEEEEPAMTDGLSEGMMSSGVSALQ
VEMASSDGGLPQQLMSSEVDGGEEISRTMTFTLTTGQVPDQMAVALATEGAARTVGEAGQ
SGDQAVRIVLTPQELAALVQQQQEPEPEPSSVPTEGLAPADSLNDPTAESHASQPAAAII
SAVARLASTFSPAPLMTETKSTAVAMATETSNGIREPPPEPTSRVKSPPKENPWFDVGIV
KVTNAVVTHYYVPYDNDAVEDDSGPAPDYSQMRRVELQPGTAYKFRVAGINICGRGAFSE
VAAFKTCLPGFPGAPCAIKISKNLGGAQLTWEPPAVTAGSITEYSVYLAIQSSQAKPSGS
GPAQLAFMRVYCGSDPCCLVQASTLANAHIDYTTKPAVIFRIAARNQKGYGPATQVRWLQ
ETSKESKPAPKRSGASQGI
NT seq 3300 nt   +upstreamnt  +downstreamnt
atgaaaagtccccacaaagacagcatgaccaacgtgtgtgtgtgtgtgtgtgtcaggatg
tacgtgttcggaggatgggtcccactcatcgaggacgacgtcaagatggggacccatgag
aaggagtggaagtgcaccaacaacctggcctgcctcaacctggagacgatgtgctgggag
acggttctgatggacggcgatgaggagaaccttcccagagctcgggccggccattgcagc
gtcgccatcaactcccgcctctacatctggagcggccgcgacggataccgcaaggcctgg
aacaaccaggtgtgctgcaaggacctgtggtacctggagacagagtgtcccgtggcgccg
tcccgggtccagctggtccgggccaacacctcgtccctggaggtaagctgggggccgtcc
aaaaccgccgacacctacctgctgcagctgcagaggtacgacatccccgccacacccggc
tccgcccccgctgccacaacacctgccagccatgctgtcccgccgcctggaagcccctca
gctgcagccgtcctgaagatggcgacactttctgcaggtgttcgtgtgtcgccacctgcc
cagcccagtcagacgccaatcggcagcaacccgcagatgagcggcatggcggcccttgcg
gcggcggcggcggtgacgcagaagatccctccgtcctcggcagccgtcctcggcgccttg
aagactgtcaacaacccggccacgcgtctgctgaagacagctgccgctcaagtgggcggg
gtttcggtagtccccgcccacacgccgcagaaccggccaatcatcaccgtgcataagtcc
ggctcagtgatggtctcccagcaaccacaggtggtcaccactgtggtgggcggagtcacc
aagaccatcaccatcgtcaacagccccattagcctgggaggaggcggggctttgattggt
aaccttggcaacctagggaagatggtgtccatggtccaaacccgaccggtccagagcgca
gtggttactggtcaggctgggagcagcccagtcactcagatccttcagacgaagggcgca
cttcctgcgggaaccatcctgaagctggtgagcgccgcggacgggaagcagaccgccatc
atcagcacggcacaggccggctccaacaagcccgccatcatcaagaccatcccgctgtcg
gctctgcagggggcagcaggtgggaacagtccaatcaccatcctgagctccaaggtggga
actccaggaacggagaagttgatcaacgccgtccccaggatgtccgccggccagcagggg
gtcacacaggtggtgctgaaaggagcccccggggtggccggtaccatcctcagaaccgtc
ccaatgagcggaatcaggctggtgtctccggctgctgctggcaccaagctggttgtcaag
ggaaccacaggcgtctccagcctgggcacgggaacaggaaacgtctctgtcgccttgttg
ggaggagcctcgctgaccacgcccaccgcctcattggccagccaggttgccacagcaacc
gcttccggacccagacaggtgacgctgatcacgacgcccagcggcgccgagccgcagccg
ctggtccaggacctgccggtctccttcatggcctctccgacctcagaggaacctggcagc
accacaggtaccactaccaccactaacgccgagggagacccagccacagcggtgactctg
gtctgctccaaccccccctgtgagactcatgagaccggaaccaccaacaccttcaccacc
gctggagccggcagagtccagcaggtgtgttctaaccccccctgtgagactcatgagacc
ggaaccaccaacaccgccaccaccgctacagctcagcagagtggagacggtctccatgga
gacgccacagactccgccccctcatccgaaactgccgtcagtcagagcgcggcggttacc
acagtaacgcatgccacgcccacaccgggtccatctgtcccggatctctcctcattggtt
ggtggtgagagggcggaggcctctgaaaccctcgccatggcaacaggagaagaggaggag
ccagcaatgacagacggcctatcagagggcatgatgtcatcaggagtgtctgcgctgcag
gttgagatggcgtcctcagacggaggtcttcctcagcagctgatgtcatcagaggtggac
ggaggtgaggagatctccaggacgatgaccttcacgctgacgacgggacaggtcccagac
cagatggctgttgccttggcgactgagggagcagccaggaccgtcggtgaggccggccaa
tcaggcgaccaggctgtccgcatcgtgctgacaccacaggagctggcggcgctggtccaa
cagcagcaagaaccagaaccagaacccagcagcgtgcccacagaggggctcgccccggcc
gacagcctgaacgacccgaccgcagagagccacgcctcccagccggccgccgccatcatc
agcgccgtcgcccggctggccagcacattcagccccgcccctttgatgacggagaccaag
agcacggctgtcgctatggcgacggaaacctccaacggcatcagagagccgcctcctgaa
ccgacctctcgtgtgaagtcgccgccgaaggagaacccgtggtttgacgtcggcatcgtg
aaggtcaccaacgccgttgtgactcattactacgttccctacgacaacgacgcggtggag
gatgactccgggccggcgccagactacagccagatgaggagggtggagcttcagccggga
accgcctacaagttccgggtggcaggaatcaacatctgcggccgcggcgccttctctgag
gtggcggcgttcaagacgtgcctccccgggttccctggagcgccgtgcgccatcaagata
agcaagaacctgggcggggcccagctcacctgggagccgcccgccgtcaccgcgggaagc
atcacagagtactctgtgtacctggccatccagtccagtcaggccaagccgtccggttct
ggcccggcccagctggccttcatgagggtgtactgtggttccgacccgtgctgcctggtt
caggcctccaccctggccaacgcgcacatcgactacaccaccaagcccgccgtcatcttc
cgcatcgccgcccgcaaccagaagggctacgggccggccacgcaggtccgatggctgcaa
gaaaccagtaaagaatccaagccggcgccgaagagaagtggagcttctcagggaatataa

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