Gambusia affinis (western mosquitofish): 122839974
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Entry
122839974 CDS
T07758
Symbol
usp9
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gaf01002
]
122839974 (usp9)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122839974 (usp9)
Enzymes [BR:
gaf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122839974 (usp9)
Peptidases and inhibitors [BR:
gaf01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122839974 (usp9)
Ubiquitin system [BR:
gaf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122839974 (usp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
122839974
NCBI-ProteinID:
XP_043987967
LinkDB
All DBs
Position
LG11:complement(8560316..8602142)
Genome browser
AA seq
2628 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQGQAPDAQSQPPLPQNQTSSPNSSNENSPVSPPDEQGQGEGPP
QLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKCEACQR
FFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMAL
NPHCKFHIYNGTRPSETVPAGAQLADDELYARPPDPRSPKGWLVDLINKFGTLNGFQILH
DRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELKKEA
KNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEV
NKVISSVSYYTHRHNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRF
VIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNA
SKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYS
CSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKMPINIQTNL
VSQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQLSKEDQAEFDPQTVRPG
SRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLM
GDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDD
LELIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKA
SYDTLCVLDGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKH
ITLIVRFPNQGRQVDDLDIWSHTNDTIGSVRRGILNRIKANAAHTKIELFIGGEIVDPAD
DRKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESC
LPGVIMSLHPRYISFLWQVADLGCSLNMPQLRDGARVLMKLMPPDNTTVENLRAVCLDHA
KLGENSLSPSLDSRFFGPSPSQVLYLIEVVYALLMPASATLGEDASDFQYNFLKSGGLPL
VLSMLTRNNFLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPNADGNIPVS
PINQATHDQALVLQSALQNIPNPTSECMLRNVAIRLAQQISDENFFQASKYIPDICVIRA
VQKIVWASGCGTVQLVFSNNDEISKIYEKTNAAKEPDGEDEQVCCEALEVMTLCFALMPT
ALDTLSKEKAWQTFIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVL
GSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGETG
VEETILEGHLGVTKELLAFQTPEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQYMKSG
EFPTEQAIPVCSTPASINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCETLTEWEYLP
PVGPRPNKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGTDVDDDMSGDEKQE
NESNVDPRDEVFSYHHQFDDKPSSKSEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGF
WKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPPMLSKVLGGSFADQKICQGC
PHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIK
KLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQVI
QQNEPSEPTPPGSSKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTE
CKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDKDSELVK
YISELNLSSTKPHQVKMPSVIECSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNP
PPGQDHLLPEAEEIAMISAQLAARFLFSTGFHTKKLVRGPASDWYDALCILLRHSKNVRY
WFAHNVLFAYPNRFSEYLLECPSAEVRGAFSKLIVFIAHFSLQDGPCPSPTASPGSSTQG
CDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLNVPATFM
LVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVSSRMQSSINGNPPLPNPYGDTNLTA
PVMPVQQLVAEILFVRTSYVKKIIEDCSNSEETVKLLRFCCWENPQFSSTVLSELLWQVA
YSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRAYQ
CIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPV
QSNETSNGYFLERSHSARMTLAKACELCPEELKCTQESPGKEPDEQEAPDDQDSSPPEDT
SLYPHSPGTTQFQQNNHPHGQPYTGPAAQHMNNPQRPGPASAPTPGPTQTPTPGPGTTPT
SGPRAQETWDGTEEVAPAPAPAPAPAPAPTPAPASTSTSTPAPAPPKE
NT seq
7887 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacgcgtggctctccggtggggggcaacgacagtcagggccagggccag
gcacctgatgctcagagccaacctccactgccacagaaccagacttcatctcctaattca
tctaatgagaactcccccgtgagcccaccagatgagcagggccagggcgaaggcccccct
cagctggaagaggaagagcctgcttttcctcacactgacttggcgaagcttgatgacatg
attaacaggcctcgatgggtggttccagttttgccaaaaggagagttagaagtcctcttg
gaagctgctatagacctgagtaaaaaaggactggatgtgaaatgtgaggcatgtcagagg
tttttccgggacggtctaacaatttccttcacaaaaatcctgacggatgaggcagtcagt
ggctggaagtttgagatacataggtgtatcattaataacacacaccgattggtggagttg
tgtgtggccaagctgtctcaggactggttcccgctactggagttgctggccatggccctc
aatccccactgcaagttccacatttataacggcacacggccttctgagaccgtccccgct
ggagcgcagctggccgacgacgagctctacgctcgtccgcctgacccgagatctcccaag
ggctggctggttgatttaataaacaaatttggcacgttaaacgggtttcaaattttgcac
gaccgcttcatgagcggccaagcactgaacgtccagatcattgctgcacttatcaagcct
tttggccagtgttacgagttcctcacattgcacacagtaaagaagtacttccttccagtc
atcgagatggttccccagtttctagagaacctcacagacgaggaactcaagaaagaggcc
aagaacgaagccaaaaatgatgcactgtcgatgataatcaagtctctgaagaatctggct
tctcgtgtaccagggcaggaggagacggtgaagaatttagagatttttaggttaaaaatg
attcttaggttattacaaatttcttcttttaacggcaaaatgaatgcactaaacgaagtt
aacaaggtgatctccagcgtctcctactacactcatcggcataaccctgaggaggaggag
tggctgacggcagagcgcatggcggaatggatccagcaaaaccacatcctttctattgtg
ctgagggacagcttgcatcagccgcagtatgtcgagaagctggagaagatccttcgcttc
gttataaaagagaaagctcttaccatgcaggacttggacaacatctgggctgcacaggct
ggtaagcatgaggctattgtgaagaatgtccatgatctcttggccaagctggcttgggac
ttctcacccgagcagctcgatcatcttttcgactgcttcaaggcaagctggaccaatgct
agcaagaagcagcgtgaaaaactgcttgagctaatccggcgcttggccgaggacgataag
gacggtgttatggcccacaaggtcctcaacctgctctggaacctggcgcacagcgacgac
gttcctgtagacatcatggatcaggctcttagtgctcacatcaagatattggactacagc
tgctcacaggacagagacacgcaaaagattcagtggattgatcgcttcatagaagagctt
cgtaccaatgacaagtgggttatccctgccttgaagcaaatcagggaaatctgcagcctc
tttggagaagctcctcagaacctgagaaagaaaatgccaattaacatacaaacgaactta
gtgagtcaaacgcagagaagccctcatgtgttttaccgccacgacctgatcaaccagctg
cagcacaaccacgctttggtcaccctggtggctgagaatctctcggcctacatggagaca
atgaggcagctgtccaaagaagaccaagcagagtttgacccgcaaacagtcagaccggga
agccgctacagtcacgtccaagaagtacaggagcggcttaactttctgaggttcctatta
aaagacggccagctgtggctgtgtgctcctcaggcgaagcagatctggaagtgtctggct
gagaacgctgtgtttctgtgcgaccgcgaggcctgcttcaaatggtactcaaagctgatg
ggggacgagccagacctagacccagacatcaacaaggacttctttgagaacaatgtgcta
cagttggacccgtcgcttctgacagagaacggcatgaagtgcttcgagaggttcttcaag
gccgtcaactgcagggaggggaagctggtagcgaaacgcagggcctacatgatggacgac
ctggaactaattggcttggactacctgtggagggtggtgattcaaggaagtgacgacatt
gcaagccgagccatagacctgctgaaagaaatctacaccaatctcggaccaaaactgcaa
gtcaaccaggttgagattcatgaagatttcatccagtcttgtttcgaccgtctgaaggcg
tcctacgacaccctgtgtgtgttagatggagacaaagacagcattaactgtgctcggcag
gaggccatccgcatggtgcgggttctcactgtgcttaaggaatacattaatgagtgcgac
agcgactaccacgaggagaggactatactgcctatgtcaagagctttccggggcaagcat
atcacactgatcgtccgtttcccaaaccaaggacgtcaggtggatgatttagacatctgg
tcacacaccaatgacaccatcggttcggtccggcggggaatcctaaacaggataaaggcc
aacgccgcacacacgaagattgagctgtttattggtggggagatcgttgatcctgctgat
gacaggaagctgattggacagcttaatttgaaggacaaaacgctgatcacagccaagctg
acccaggtgagtgccaacatgccctccagcccagacagctcatccgactcatccactggc
tcccctggtaaccatggaaaccactacagtgatgggcccaacccagaagttgagagctgt
cttcctggtgtgattatgtcgctacacccgcgctacatctcctttctgtggcaagtagcc
gacctcgggtgcagcctcaacatgcctcaactaagagatggagctcgagttctcatgaag
ctcatgcctccagataacaccactgtggagaatcttagagctgtgtgtttggaccatgcc
aagctaggagagaacagtctgagtccgtcactagactcccgtttcttcggcccttcacct
tcacaagtgctctacctcattgaggttgtgtatgctttgctgatgccagctagtgccact
ctgggtgaggatgctagtgacttccagtacaacttcctgaaaagcggcggcctgccactg
gtgctaagcatgctcaccaggaacaacttcctcccgtccgcggacatggagacgcgccga
ggcgcttacctcaacgctctgaagatcgccaagctcctcctgactgcggtcggcttcggc
cacgtgaaggctgtggccgaggcctgccagcccaacgctgacggaaatattcccgtctct
ccgataaatcaggcgactcacgaccaggcgctggttcttcaaagtgccctgcaaaacatt
cccaaccctacctctgaatgtatgttgcgcaatgtagctatccgtctggcccagcagatt
tctgatgagaatttcttccaggcatcaaagtacatcccagacatttgcgtgatccgagca
gtgcagaaaatcgtgtgggcatcgggttgtggcacagtgcagctggtatttagtaataat
gatgaaatcagtaaaatatacgagaagactaatgcagctaaggagccggatggagaagat
gagcaggtgtgctgcgaggctttggaagtgatgacgctgtgttttgccctcatgcccacg
gctctcgacacgctcagtaaggagaaagcttggcagaccttcatcatagacttgttgcta
cactgccacagcaagtccgttcgtcagatggcccaagagcagtttttcctaatggcgact
aggtgctgcatggggcatcggcctcttcttttcttcatcaccctcctcttcacagtgctc
gggagcacagccaaagagcgagccaaacacgcaggggactacttcacgttgctccgacat
ctgctcaactatgcctacaacagtaacatcaacctgccaaacgccgaggtgctgctcaac
aacgagatcgactggctcaaacggatacgggatgaggttaagaggacaggagaaactggt
gtggaagaaaccatcctggagggccaccttggtgtcaccaaagagcttctggccttccag
acgcctgaaaagaaatactacattggctgtgagaagggaggagcaaatctcattaaggag
ctgatcgacgacttcatcttcccagcatctaatgtttacctgcagtacatgaagagtggg
gagttccccacagagcaggccatcccagtgtgtagcactcctgcatccatcaacgccggc
ttcgagctcctggtggcgctagcagtcggctgcgtccgcaacctcaaacaaatagttgac
accctaactgacatgtactacctgggttgcgagacactgacagagtgggagtacctgcct
cccgtgggaccgcgccctaacaaaggctttgtcggcctgaagaacgccggtgctacttgc
tatatgaactctgttatccagcagctttacatgatccctccaatccgcaacggcatcttg
gcgatcgagggtacaggcaccgacgtggacgatgacatgtctggcgatgagaagcaggaa
aatgagagtaatgtagaccctcgtgatgaagttttcagctaccaccaccagtttgatgac
aaaccctccagtaaatcggaggacaggaaagagtacaacatcggggtgctgcgtcaccta
caggtcatcttcggtcacctggctgcatccagactgcagtactacgtcccaagaggcttc
tggaaacagttcagattatggggagagccagtaaatttgagggagcagcatgacgctttg
gagttcttcaactctttggtggacagtttggatgaagctctgaaagctttgggtcaccct
cccatgctcagcaaggtgttgggagggtccttcgctgaccaaaagatttgtcaagggtgt
ccccatagatatgagtgtgaggagtcatttacaacgttaaacgtggacattagaaaccac
cagaacttgttggactcgatggagcaatatgttaaaggagatctgctggaaggagccaat
gcctaccactgtgagaaatgcaataagaaggtggacacagtgaagcgtctgctgatcaag
aagctgccgcctgtcctggccatccagctgaagcgcttcgactacgactgggagagggag
tgcgccatcaagttcaacgactactttgagttcccgcgggagctggacatggagccgtac
acggtagcaggcgtggccaagctggagggcgacgacgtgaacccggagaaccaggtgatc
caacagaacgagccgtccgagcccacgccgccgggcagctccaagtaccgactggtggga
gtgctggttcactcgggccaggcgagcggcggacactactactcctacataatccagcgg
aacgggggcgacggcgagaagaaccgctggtataagttcgatgatggcgacgtgacggaa
tgcaagatggacgacgaggaggagatgaagaaccagtgcttcgggggagagtacatgggc
gaggtgttcgaccacatgatgaagcggatgtcgtatcggaggcagaagcgatggtggaac
gcctacatcctgttctacgagcgtatggactcgctggacaaggacagcgaacttgtcaaa
tatatctcagagctgaacctgtcctccaccaagccccatcaggtcaagatgccgagcgtc
atcgagtgcagcgttcgcaagcagaacgtccagttcatgcacaaccgaatgcaatacagc
ctggaatatttccagttcattaagaaacttctgacctgtaacagtgtctatttaaaccct
cctccaggacaagaccaccttctgccagaggcagaggagattgctatgatcagtgctcag
ctggctgctcggttcctcttcagcacaggttttcacaccaagaaattagtacggggtcct
gccagtgactggtatgacgccctctgcatcctgctgagacacagtaagaatgtacgctat
tggtttgcacacaatgttctctttgcttaccccaatcgcttctccgagtacttgctcgag
tgcccgagcgcagaggtccgtggggcattttccaagctcatagtcttcatcgctcacttt
tccctgcaagacggaccgtgcccctcacccacagcttcgccaggatcctccactcagggc
tgtgacaatctcagccttagtgaccatctgttgagagctgtactcaacctgctcaggaga
gaggtttctgaacatggccgccacctccagcagtactttaacctctttgtcatgtacgcc
aatctgggtctggcagagaagactcagctgctgaagctaaatgttcccgccacgttcatg
ttagttgctctggacgagggtcccgggcctcccattaagtaccagtatgctgagctgggc
aagctctacactgtggtctcccagcttgtccgctgctgcgacgtctcctcccgtatgcag
tcctcaattaatggtaatcctcctcttcctaacccgtacggggacaccaacctgacggct
cccgtcatgccggtgcagcagctagtggcagagattctgtttgtgcggactagttatgtg
aagaagatcattgaggactgcagcaactctgaggagacggtgaagctgcttcgcttctgc
tgctgggaaaaccctcagttttcctccactgtgctcagtgaactgctctggcaggtggca
tattcctacacctatgagctgaggccttacctagacttgttgctacaaatcttactcatc
gaggactcctggcaaacgcacaggatccacaatgtgctgaaaggcatccctgatgacaga
gatgggctatttgacaccattcagcgctcgaaaaaccactaccagaaacgggcctatcag
tgcatcaagtgcatggtggccctctttagcaactgctctgtggcttatcagatcctgcag
agcaatggtgacttgaagcgaaagtggacatgggcagtggagtggttaggggacgagttg
gagaggcggccgtacacgggaaacccccagtacacgtataacaactggtcccctccagtt
cagagcaacgagacctccaatggatattttcttgagcgctcccacagtgcacgcatgaca
ctggccaaggcttgtgaactctgtcctgaagagctcaagtgtactcaggaaagcccaggg
aaggagccggatgaacaggaagcacctgatgatcaagactcgtctccacctgaggacacc
tctctgtaccctcattctcctggaaccacccagttccagcagaacaaccatccccatggg
cagccgtacaccgggcccgctgctcagcacatgaacaaccctcagcgtcccggtccagcc
tccgccccgactccaggcccgacccagactccgaccccgggccccggtaccactcccacc
tcgggcccgcgagcacaagagacctgggacggcaccgaggaggtggccccggccccggcc
ccggccccagcacccgccccagccccaaccccggccccggcctcgacctccacctccacc
ccagcacccgcccctcccaaggagtaa
DBGET
integrated database retrieval system
