Gambusia affinis (western mosquitofish): 122840074
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Entry
122840074 CDS
T07758
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122840074 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122840074 (mid1)
Enzymes [BR:
gaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122840074 (mid1)
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122840074 (mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
PRY
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
Ig_DSCAM-DSCAML_C
zf-RING_5
Pur_ac_phosph_N
Inhibitor_Mig-6
NDNF
Phage_T7_55
Motif
Other DBs
NCBI-GeneID:
122840074
NCBI-ProteinID:
XP_043988135
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All DBs
Position
LG11:14125607..14166343
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AA seq
689 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCTPSEPIQSISAFQCPTCR
YVITLNQRGLEGLKRNVTLQNIIDRYQKASLSGPNSPSETRRERVIPEGKAMTSPADRVQ
CQFCEQDPPQDAVKTCVTCEVSYCEECLKATHPNKKPFTGHRLIEPLQDSHLRGLMCLEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHQVAALSDRYDKLKTSPGRLLCAGNDQSYQEA
DQQALDSNLSSLIKRTSELESLMGKLIQTCQNVEVNASRQENKLQEECDLLINIIQHRRQ
IIATKIKEGKAMRLRKLAQQIAGCKQCVERSSSLITQADQTLKESDHARFLQTAKSICER
VSMATASSQILLPEINLNDAFDTFALDFTREKKMLESLDYLTAPNPPSIREELCTASYDT
ITVHWTSDDEFSVISYELQYAIFTSQSNVVSLCNSVDSWMIVPNIKQNQYTVHGLQCGTN
YIFIVKAINQAGSRSSAPGKLKTNSQPFKLDPKSAHRKLRVSHDNLTVERDETSSKKSHS
QERFSSHSSYGVTGNVYIDSGRHYWEALIGGSTWFAVGIAYKSAPRHEWVGKNSASWVLS
RCNNSWVVRHNSKEIPIEPSPHLRRLGILLDYDSGSLSFYDAVASQHLYTFDIDFVHPVC
PVFNVWNRCLTVLSGLPIPDHLESTDFNH
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactagagtctgagctgacctgcccaatctgtctggagctttttgaggaccca
ctgctgctgccctgtgctcacagtctttgtttcaactgtgcccatcgtatcttggtctcc
cactgcacccccagcgagcctatccagtctatcagcgccttccagtgtccaacttgtcgc
tatgtcattactctcaaccagagaggcctagagggactcaaacgcaacgtgaccctacag
aacatcatcgaccgctaccagaaagcctctctaagtggacccaactcccctagtgagact
cgtcgtgagcgagtgatcccagaaggcaaagccatgacatctcctgcggaccgagtgcag
tgtcagttctgcgagcaggacccccctcaggatgcagtgaagacctgcgttacctgtgag
gtatcgtactgcgaggaatgcctcaaggccacccacccaaataagaaacccttcacgggc
caccggctgattgaacccttgcaggactcccatctccggggactcatgtgtctggagcac
gaggacgagaaagtcaacatgtactgtgtaacagacgaacagttgatctgtgccttgtgc
aaacttgtcggccgacatcgagaccaccaagtggcggcccttagcgaccgatacgacaaa
ctcaagacgtctcctggccgccttctctgtgcggggaatgatcaatcataccaggaggcg
gaccagcaagcattggactccaacctcagcagcttaatcaaacggaccagtgaattagaa
agtttgatggggaaactcatccaaacctgccagaatgtggaggtaaacgcctcgcggcaa
gaaaacaagctacaggaggagtgtgacctgctgattaatatcatacagcatcgaagacaa
ataatagcaacaaagataaaggagggaaaggccatgaggctgaggaagctcgctcaacag
atagcaggctgcaagcagtgcgtcgagagatcgtcctccctcatcactcaggctgaccaa
acccttaaggaaagcgaccacgcccgcttccttcagacagctaaaagtatctgtgagaga
gtctctatggcaacagcatcctctcagatactgttaccagaaattaacctgaatgatgca
ttcgatacgtttgctttggacttcacgagggaaaagaaaatgctagaaagtctggattac
ctcacagcaccaaatccaccgtcaattcgtgaggaactgtgtacagcttcgtacgacacc
atcacggttcactggacatcagacgatgagttttctgttatttcatatgagcttcagtat
gccatcttcaccagccagtctaatgttgtcagtctgtgtaactctgttgatagttggatg
attgtcccaaacattaagcaaaatcaatacaccgtgcatggactccaatgtggcaccaac
tacattttcatagtgaaggccataaaccaggctggaagccgcagtagcgccccggggaaa
ctcaaaaccaacagtcagccattcaaattggacccaaagtctgctcatcggaagctaagg
gtatcccacgataaccttacggtggagagagatgagacatcatctaaaaagagccacagt
caggagcgcttctccagtcacagcagctacggggttactgggaatgtatacatagacagc
ggccgccattactgggaagctctgattggaggaagcacatggtttgctgtggggattgct
tacaagtctgcaccaagacacgagtgggttggcaagaactcagcctcctgggtactctcc
cgctgcaacaactcgtgggtggtgcgccacaacagcaaggaaatccccatcgagccttcg
ccccacctgcggcgccttgggattttgttggattatgattcaggatcgctctccttctac
gatgcggtggcctcgcagcacttgtacacatttgacattgattttgttcatccagtctgc
ccggtgttcaatgtttggaatagatgtttgacagtcctcagtggactgcccatacccgat
catttagagagcacagactttaaccactga
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