Gambusia affinis (western mosquitofish): 122840095
Help
Entry
122840095 CDS
T07758
Symbol
chaf1b
Name
(RefSeq) chromatin assembly factor 1 subunit B
KO
K10751
chromatin assembly factor 1 subunit B
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122840095 (chaf1b)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
122840095 (chaf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
B-prop_COPA_B_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
CAF-1_p60_C
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
Beta-prop_EML
Beta-prop_SCAP
eIF2A
WDR90_beta-prop_4th
Beta-prop_HPS5
Ge1_WD40
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
122840095
NCBI-ProteinID:
XP_043988190
LinkDB
All DBs
Position
LG11:complement(13223267..13233416)
Genome browser
AA seq
615 aa
AA seq
DB search
MKVVTCEIAWHNKEPVYSLDFQHNTEGRFHRLATAGVDTTVRLWQVEQGPDGKAVVEFLS
NLARHSKAVNVVRFSPNGELLASGGDDAAILLWKLNDSKEPEQATVFQDEEDAQLNKESW
SVVKTLRGHLEDVYDICWTRDGNFMISGSVDNTAIMWDISKGQKVCMLNDHKSYVQGVTW
DPQGQYVATLSCDRLMRVYSTHTKKKAFCISKMSSGPLADGEVKQYRMFHDDSMRSFFRR
LSFTPDGSFLLAPAGCVEVGENIINTTYIFSRKSLKRPIAHLPCPSKATLAVRCCPVYFE
LRTKKGEDGSPQALPNLFQLPYRMVFAVASEDSVFLYDTQQSLPFGLVSNIHYHTLSDLT
WSSDGSFLAVSSTDGYCSFLSFSPGELGTPLKEPPVLEIFVPNSGVEKKGKKTSAGKNSS
PVSQPSSSTPNPASQTSSGKRDSPCPTPTDEKKTSPKPRSTPQPRRITLNTLEGWGKPTT
PKPSTPSASQTPASGSTSAPSTPQPSVTPLTPTSSSRTQPRLAPLTPSTSKVLNTAGSTT
PKGPTTPKGPTPRRVSLTPLGSRPPAVSSLFSSAAAAEKAKHERPSPPSDSVCQPPESKR
AKTSNTPVKTRTCKD
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtggtgacttgtgagattgcctggcacaacaaggagccggtgtacagtctggac
ttccaacacaacacagagggacgttttcatcgactggccacagctggagtggacaccacg
gttaggctgtggcaggtggagcaaggtccagatgggaaggccgtggtggagtttttgtct
aacctggccagacacagcaaggcggtcaatgtggttcgctttagccctaatggagagctg
ctcgcttcagggggagacgatgcagctattcttctgtggaagctcaacgactccaaggag
ccggaacaggccactgtgtttcaggatgaagaagacgctcagctcaacaaagagagctgg
tcggtggtcaaaacgctcagaggacatttagaggacgtgtatgacatctgctggacgcga
gacggaaacttcatgatttctggatctgttgacaacactgctattatgtgggacatcagc
aaaggacaaaaggtgtgtatgctgaatgaccacaagagctacgtgcagggggtgacctgg
gatccacagggccagtatgtcgccacgctcagctgtgacagactgatgcgtgtctacagc
actcacacaaagaagaaggccttctgtatcagcaaaatgagctctgggcctcttgctgat
ggagaggtgaagcagtacagaatgtttcacgacgacagcatgaggtccttctttcgtcgt
ctttcttttacaccagatgggtcgttccttctcgctccagctggatgtgttgaggtggga
gaaaacatcataaataccacttacattttctccaggaaaagcctaaagaggccgatcgcc
cacctgccctgtccgtctaaagccaccctggctgtgcgatgctgtccggtctactttgaa
ctcaggaccaaaaagggagaagacggatctccccaggctctccccaacctcttccagctg
ccgtaccgcatggtgtttgccgtggcctccgaggactctgtcttcctgtacgacactcag
cagagccttccctttggcctggtgtccaacatccactaccacacactcagtgacctcaca
tggtctagtgatggttccttcctggccgtgtcgtcaacagacggctactgctccttcctc
tccttctctcctggggagctgggcactccgctcaaggagcctcccgtcttggaaatcttt
gtcccaaacagcggcgtcgagaaaaaagggaagaagacgtcagcgggcaaaaactcctct
ccggtttcccagccgtcgagctccaccccgaacccggcatcccaaaccagcagcggtaaa
agagactccccgtgtcccaccccaacggacgaaaagaagacctccccgaaacccagatcg
acgcctcagcctcgcaggatcacccttaacacgctggagggctgggggaagcccactact
cccaaaccttcgactccctcagcaagtcagactccggcatctggaagcacgagcgctccc
tcgactccccagccctccgtcactcccctcaccccgaccagctcctccaggacccagccc
cgcctcgcacctctcactccctccacatcaaaggttctcaacactgctgggtccacaacc
cctaaaggtccgaccaccccaaaaggacccaccccaaggagagtgtctttgactcccctt
ggatctcggcctccagctgtcagctcactgttcagcagcgctgcagccgcagagaaggcc
aaacacgagcgtccatctcccccctccgattcagtttgccaacctccagaatccaaacgg
gccaagaccagtaacaccccagtaaaaaccagaacatgtaaggattag
DBGET
integrated database retrieval system
