Gambusia affinis (western mosquitofish): 122840171
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Entry
122840171 CDS
T07758
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04145
Phagosome
gaf04210
Apoptosis
gaf04530
Tight junction
gaf04540
Gap junction
gaf04814
Motor proteins
gaf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122840171
09143 Cell growth and death
04210 Apoptosis
122840171
09144 Cellular community - eukaryotes
04530 Tight junction
122840171
04540 Gap junction
122840171
09142 Cell motility
04814 Motor proteins
122840171
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122840171
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122840171
03036 Chromosome and associated proteins [BR:
gaf03036
]
122840171
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gaf04812
]
122840171
04147 Exosome [BR:
gaf04147
]
122840171
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122840171
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
122840171
Cytoskeleton proteins [BR:
gaf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
122840171
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122840171
Exosomal proteins of other body fluids (saliva and urine)
122840171
Exosomal proteins of colorectal cancer cells
122840171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
DUF7281
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
122840171
NCBI-ProteinID:
XP_043988331
LinkDB
All DBs
Position
LG11:complement(20764189..20769454)
Genome browser
AA seq
448 aa
AA seq
DB search
MRECISVHVGQAGVQMGNTCWELYCLEHGIQPDGQMASSSPTGPDDSFTTFFSETCAGKY
VPRAIFVDLEPTVIDEVRTGKYRQLFHPEKLISGKEDAANNYARGHYIIGKEIIDPVLDS
IHKLADQCSGLQGFLVFHSFGGGTGSGFTSLLMERLSVDFGKKSKLEFAIYPAPQVSTAV
VEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRKLNIEYPTYTNLNRLISQIVSSITAS
LRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISSEKACHEQLSVAEITNTCFEPENQ
MVKCDPRHGKYMACCLLYRGDVVPKDVNVAISNIKTKRNIQFVDWCPTGFKVGINYQPPT
VVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEA
REDMAALEKDYEEVGIDSFEEEEEDDEY
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgcatctctgtccatgtgggccaggcgggtgtgcagatggggaacacctgc
tgggagctctactgtctggagcatggtatccagccagatggccagatggcaagcagttcc
cccacaggtcctgatgactccttcaccactttctttagtgagacatgtgctgggaaatat
gtcccaagggcaatttttgttgatctggagcccactgtcattgatgaagtgagaacagga
aaataccgtcaactcttccatcctgaaaagctgatctctggaaaggaggacgctgcaaac
aactatgctcgaggtcactacattattggcaaagagattattgatcctgtcctggacagc
atccacaaactggctgatcagtgcagtggtctccagggattcttggtattccactctttt
ggtggtggaacaggttctggttttacctctctgctcatggaaagactctctgttgacttt
ggcaagaagtccaaacttgagtttgcaatctacccggcaccccaggtttctacagcagta
gtggagccttacaactccatcttgactacccacaccacactggagcactccgactgtgct
ttcatggtggacaatgaggccatctatgatatctgccgcaggaagcttaatattgaatat
cccacctataccaatctgaaccgccttatcagccagattgtgtcctcaatcacagcatct
ctccgctttgatggagccctgaatgttgacctgacagagttccagaccaacttggtgcct
tatcctcgtatccacttccctctggccacctatgctccagttatatcttctgagaaagcc
tgccatgagcagctatctgtggctgagatcacaaatacttgttttgagccagaaaatcag
atggtgaagtgtgacccacgtcatggtaaatatatggcctgctgtctgctctatcgtggt
gatgttgtacccaaagatgtaaatgtagccatttctaatattaagaccaaacgcaacatc
cagtttgtggactggtgccccacaggtttcaaggtggggatcaactaccagcctccaact
gtggttcctggaggagaccttgctaaggtgcaaagagctgtgtgcatgctgagcaatacc
accgccattgctgaggcctgggccaggctcgaccacaagtttgatctcatgtatgccaag
agagcctttgtccactggtatgttggagagggaatggaggagggagagttctcagaggct
agagaagatatggctgctttggagaaggattacgaagaagtgggtattgactcatttgaa
gaagaggaggaagacgatgaatattaa
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