Gambusia affinis (western mosquitofish): 122840204
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Entry
122840204 CDS
T07758
Name
(RefSeq) aryl hydrocarbon receptor-like isoform X1
KO
K09093
aryl hydrocarbon receptor
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122840204
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
122840204
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
bHLH_NPAS4
HLH
bHLH_HIF1A
PAS_9
Motif
Other DBs
NCBI-GeneID:
122840204
NCBI-ProteinID:
XP_043988379
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All DBs
Position
LG11:1227919..1266313
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AA seq
961 aa
AA seq
DB search
MFNNLGTYANKKRKKPVLKQKKVADNNEVVKSNPSKRHRDRLNGELDRLMELLPFPDEVR
SRLDKLSVLRLSVGYLRVKSYFKASMKNGNGGRVPLGVSGQNMDSTGFSEGELLLQALNG
FVLVVTSEGMVFYTSPTIKDYLGFQQSDVVHQSVFELIHTDDRALFREQLHFALNPPADT
SDGDFSQNCGNAVMYNPEQLPPDNSSFLERSFFCRFRCLLDNSSGFLALKFHGRLKYLHG
QNFSRDSESCKSIQLALFAIAVPVQSPSIVEIRAKMLLFQTRHKLDFTPTGVDSRGKIIL
GYSEMELCVKGSGYQFIHAADMMYCADNHIRMIKTGESGLTVFRLLSKSNGWIWVSSNAK
LIFKGGRPEFIIAYQKALTNAEGEEYLRKRRLQLPFSCATGEAILYNTGPTMDISQFQFD
KMFDSRNTKRDLHPTSLLDCFMSQDENMYSQAVDNPLPVDEVFMDTHALVTVASNEWQEK
NSSEVPAEPVLMKKEGKQSVLAVIDSLEKLTHSGDFEDILGNLEVDDSELMELENCFKRF
HQEEDPQRSSGSDLDNFITDEIVDFIDSMFKEKGGECLNSLTSSCLTDVNNFSSSELCEP
QLFHTPDPSCSYSPVSSCYEHLDDSVLSGQSLAVSAPMGSRSHRQSQQGHTDSSLPPLQQ
LQLHDIFSPAIELPALTVPNNSVTEAFPSTQPCQNQQASIMPARCSQGTSAQAQQLLQLG
NRMEGPELATGQILQNSAQHLSNTAPGEKTVLPPTIPYSKFTSTPPGDPKFLQKGLVCEN
HSAPVQQWPKSQQQTLPHAGIIQNGHESMSTFQSQNPGSQTFPSSSFCPGNVSRLRHLEQ
GGLRPAGSQDPFSSWILQQHFSSNSAGVKLLSHYGSPDLNLANVPPDQSTNYLQWSHSEL
PVGPSAINQEMANIGPLALGMAPAEDSCNIQHYLDSNTQTQQNSGVSTQAQGIFINHVPM
E
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataatctggggacgtacgccaacaagaagaggaagaagcctgtcctcaagcag
aagaaggttgctgacaacaatgaagttgttaaatcgaacccttccaagcgccaccgggat
cggctaaatggggagctggaccggctgatggagctgctgcctttccctgatgaggttcgc
tcccgcctggacaagctctccgtcctgcgcctgagcgtgggatatctcagggtcaagagc
tattttaaagcttccatgaagaacggtaatggcggccgggtgcctctgggggtcagcggg
cagaacatggactccactggcttctctgaaggagagttgctgctgcaggcactgaatggc
tttgtgttggtggtgacgtctgaaggaatggtgttttacacctcccctaccatcaaagac
tatctgggcttccaacagtcagacgtggtccaccagagtgtgtttgagctcatccacact
gacgaccgagccttgttcagagagcagctccactttgccttaaaccctcctgcagacacc
tccgatggagacttctcccagaactgtggaaatgcagtgatgtacaacccggagcagctc
ccccctgacaactcctccttcctggagaggagctttttctgtcgcttccgatgtctcttg
gacaattcctccggcttcctggccctgaagttccatgggcgcttgaagtacctccatggt
caaaacttttccagggacagtgagagctgtaaaagtatccaactagctctgtttgccatc
gctgtgcctgtccagtctccgtcaattgtggagatcagagccaaaatgctgctcttccag
acacggcacaagctggactttacacccactggcgtcgacagcagggggaagataatcctg
ggttattctgagatggagctgtgtgtgaaaggctcaggctaccagttcatccatgctgca
gacatgatgtactgtgctgacaaccacatccgcatgattaaaacaggagagagcggtctg
actgtattcagactgctcagcaaatccaacggttggatatgggtgagctctaatgccaag
ctcatcttcaaaggagggagacctgagttcatcattgcataccagaaagctttaaccaat
gctgagggagaggagtacctaagaaagcggcggctgcagctgcccttcagctgtgccacg
ggagaggccattctctacaacacggggcccactatggacatctcgcagttccagtttgac
aaaatgtttgacagcagaaatactaagagggacttgcaccccacctcccttttggactgc
ttcatgagtcaggatgaaaacatgtacagccaggcggtggacaaccccttacctgtggac
gaagtgttcatggacacccacgctctggtcactgtagccagcaacgagtggcaggagaag
aactcatcagaggtgccagctgaacccgtgctgatgaagaaagagggcaagcagtcagtg
ctggctgtaatcgacagcctggagaagctgactcacagcggagactttgaagacattctg
gggaacctggaggtagacgattctgagctgatggagttggaaaactgctttaagaggttc
caccaggaagaggatcctcagagaagttctggctcggatctggacaacttcatcaccgat
gagattgtagactttattgactcgatgttcaaagagaaggggggggagtgcttgaacagc
ctcacctcgagctgccttacagatgtcaacaatttctcatcctctgaactgtgtgagcca
cagctcttccacactcccgaccccagttgttcttactctcctgtgagcagctgctatgaa
cacctagatgactctgtgctttcaggccagagtctggctgtgtccgctccgatgggcagc
aggagccacagacagtcccaacagggtcacactgacagcagtctgccgccgctgcagcag
ctgcagctgcatgacatcttcagcccggctatagagctcccagcgctcactgtacccaac
aactcagtgacagaggccttcccttctacccaaccctgccagaatcagcaggcatccatc
atgccagctcgatgttctcagggcacttcagctcaggcccagcagctcctgcagctggga
aacaggatggagggaccagaacttgcaactggccagatcctgcaaaattctgctcaacat
ctgagcaacacagcacctggtgaaaaaactgtcctgccacccacaattccctatagcaaa
ttcacctccacacctcctggtgatccaaagtttctgcagaagggtctggtgtgtgagaat
cacagcgctcctgtgcagcagtggcctaagagccagcagcagacgctgccacatgctggc
atcatccagaacggacatgagtccatgtccacattccagagccaaaatccagggagccaa
acattccctagttccagcttctgtccaggcaatgtcagcagactgagacacctggagcaa
gggggtctgagaccagccggcagccaggaccccttcagcagctggatactccagcagcac
ttctcctccaactcagcaggggtaaaacttctatctcactatggttccccagatctcaac
ttggccaatgtgcctccggatcagagtaccaactacctacagtggagccacagtgaactt
ccagtgggcccgtcagccatcaaccaggagatggccaacatcggccctctggctcttggc
atggcgcctgcagaggactcctgtaacatacagcactacctggacagcaacacacagaca
cagcagaacagcggagtatccactcaggctcaaggaatcttcatcaatcatgttcccatg
gagtag
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