Gambusia affinis (western mosquitofish): 122840312
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Entry
122840312 CDS
T07758
Symbol
trim33
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase TRIM33
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
gaf01001
]
122840312 (trim33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122840312 (trim33)
Enzymes [BR:
gaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122840312 (trim33)
Protein kinases [BR:
gaf01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
122840312 (trim33)
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122840312 (trim33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
PHD-1st_NSD
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
122840312
NCBI-ProteinID:
XP_043988537
LinkDB
All DBs
Position
LG01:14500817..14530398
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AA seq
1196 aa
AA seq
DB search
MRAPGSRTYAGRAAVVRGRKMADNKDEEEMEPSSNADPVPSGQAEKQSSTESEDNVIAIE
ADSKGDPETESPKDANEELNTSSEGVDDSTDGATEATXAAAAAVVAAEEADGNASNAASP
TETSNGNSEPSAVDAVPAADAPVSGNTTETSPAPTAPAAAATPVSTPINLLDTCAVCKQS
LQTRDCEPKLLPCLHSFCLKCIPQPDRQISVQVPGPHGQTDTHIVNVMRCSVCHQDYKQS
DIIDNYFVKDTTEATSTSDEKAAQVCTSCEDNAGTVGFCVECGEWLCKTCVEAHQRVKIT
KDHKIRTKEDADAASDSVTTGQRLVFCPIHKQEPLKLFCETCDTLTCRDCQLLEHKEHRY
QFLEEAFQNHKGIIEANMAKLQEKKNYVHYSVSQLQNRLKELGETHRKVEHEIKIAVFTL
INEINKKGKALLQQLESVNKERSLRLMGQHKDTTQLAQQIHHVLNFCNWAITSGSSTALL
YSKRPIMYQLRQLFKARLEPAPQSNGVVRFFCDPTFWAKNVVNLGNLVIEKPPPVPQPPG
VMVGGPAISPGQSHPGKHPGQINLAQLRLQHMQQAAYAQQKHQQHQQQQQQQQQQQQIQQ
QMRIASQMSQQHARPGGPPLVQQQPPRLISMQQLQRAGAINGGTNPSMYPSSHHMRLAGP
PQGRMPTAQPRHNGQQYAPMMQPQLQRQHSNPGHAGPFPVASLHNASPTSPTSASMAGAH
AHRGPASPIIGPIELIPSVTNPENLPCLPEIPPIQLEDAGSSNLGYLLSRCISASQQHQL
GSTDMNPSPGLSTLSPGSSGLSNAHTPARPSSTSSTGSRGSSSSAGRAGTGGGSAAEQLK
VKKEPCTEDDYSCSSSVKTERAKDAGRSACMMSSPESSPLGAPSAGPDSYRDVGERVKTE
PMSETSCSGLNGTSSSTSTATSQTGSALTNGSVVKRSGSHDAAQGGGGKDDDPNEDWCAV
CINGGDLLCCDRCPKVFHMKCHVPTIKIFPQGEFLCTFCRSIADPEIEYCDESKRIKGDQ
SLSPEDQRRCERLLLYIFCHELSMGFREPVASSVPNYYKIIKQPMDLKKVKKKLQLRSSQ
YYKSTQEFVNDMRLIFKNCAKYNEMSRIIQVYDEEKEINTQAGSEMAISGKAVSLYFEEK
LQDIFPDQHFPDSPEPGSSDEKEKEREDVDTEDSEEDFIQPRRKRLKTDDKLVHIK
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgctcccggttcgagaacttacgcaggacgtgcagcggttgtaagaggaaggaag
atggcggataacaaagacgaggaggagatggaaccgtcatctaatgcggacccagtgcct
tcagggcaagccgagaagcagtctagcacagaaagcgaagacaacgtaatagctatagaa
gcagattcgaagggagatccagaaaccgagtctcctaaggacgctaacgaggagctcaat
accagcagtgaaggagtggacgatagcactgacggggcaaccgaggctactnctgctgct
gctgccgctgttgttgcggcagaggaagctgacggtaacgctagcaacgcagctagcccc
accgagaccagcaacggcaactcagaaccgtcggcagttgacgctgttcctgccgcggat
gctcctgttagcggaaacacaactgaaacatctccagctccgactgccccagcggcggcg
gcaacgccggtgtccactcctattaatttactggatacgtgcgctgtgtgtaaacaaagt
ctccagactcgagactgtgaaccaaaacttctcccctgcctacactcgttttgcctgaaa
tgtatcccgcagccggacagacagataagcgtacaggtgcctggtccacacggtcaaacg
gatacgcatatagtaaatgtcatgcggtgttcggtttgccaccaggactacaagcaaagt
gacattatcgacaattactttgtcaaagacacaacggaagctaccagcacatctgatgaa
aaagctgcgcaggtgtgcacaagctgtgaagacaacgctgggacagtaggcttttgtgtg
gagtgcggagaatggttgtgtaaaacctgcgtggaggcccatcagagagtgaaaattacc
aaagaccacaaaatccgtacaaaggaagatgctgatgctgcgtctgattctgtcacgaca
ggacagaggctagttttctgtcccatccacaagcaggaacctctgaaacttttctgcgag
acatgcgacactctaacgtgtcgggactgtcagcttctggagcacaaggagcacaggtac
cagtttctggaagaagctttccagaaccataaaggaatcatcgaagccaacatggccaaa
ctacaggaaaaaaagaactacgtccattactctgtgtctcaattgcaaaacaggttaaaa
gagctgggtgagactcatagaaaagtggaacatgagatcaagattgctgtattcactctt
ataaatgaaatcaacaaaaagggcaaagcgttacttcagcagttagagagcgtgaacaaa
gagaggagcttgaggctgatgggtcagcataaggacaccacccagctggctcaacagatc
caccatgtgctcaacttctgcaactgggccatcacttcaggcagcagcactgcattgctt
tatagcaagaggccgatcatgtaccagcttcgccagctcttcaaggcgagactggagcca
gccccacagtccaatggagttgtacggttcttctgtgacccaacgttttgggctaagaat
gttgtcaatttaggtaatttggttattgaaaaacctcctccagtcccacaacctcccggt
gtgatggtaggcggaccggccatttcaccaggccaaagtcaccccggcaaacatccaggg
cagatcaacctggctcagctcaggctgcaacacatgcaacaggctgcatacgcacagcaa
aaacatcaacagcatcagcagcaacaacagcagcaacagcagcagcagcagattcagcaa
caaatgcgaatagcctcccaaatgtcccagcagcatgccaggccaggcggcccgcctttg
gttcagcagcagcctccaaggctcatcagcatgcagcagctacaaagagctggagctatc
aatggtgggaccaacccttctatgtacccctcctcccatcatatgcgtctggctggtcca
ccacaaggccggatgcccacagctcagcccagacataacggacagcagtatgccccgatg
atgcagcctcaattacaaagacagcattccaaccccggacacgctggcccctttccagtg
gcgtccctgcataacgccagtcccacgagtccgaccagcgccagcatggccggtgcccac
gcacaccgcggccctgccagccccataattggtcccatcgaactcatcccctccgtcact
aatcctgagaacctgccctgcctccctgagataccgcccatccagctggaagatgctggt
tccagcaatctcggatacctcctctctcgttgcatctccgccagccaacaacaccagctg
ggctcaacagacatgaacccctctcccggactgtcgactctttctcctggatcgtcaggt
ctatccaacgctcacacaccggcgcgaccttccagtacgtcaagtacaggcagcagaggc
agttctagctctgctggcagagcggggacaggtggtggatctgctgcagagcagctgaag
gtgaagaaagaaccctgcactgaggatgactacagctgctcctcttctgtgaagactgag
cgagccaaagatgctgggaggagcgcctgcatgatgagcagtccagagagcagcccactg
ggcgctccgtccgcagggccagattcttacagggacgttggcgaacgcgtcaaaacggag
cccatgtctgagacgtcttgctctggactgaacggcacgtcgtcttccaccagcactgcg
acaagccagacgggctctgcgctcaccaatggaagcgtagtcaaaagaagtgggtcgcat
gatgcagcgcagggcggtggcgggaaagatgacgaccccaacgaagactggtgtgctgtt
tgtatcaacggcggcgaccttctctgctgcgaccgctgtcctaaagtattccacatgaaa
tgccacgtacccaccataaaaatcttcccacaaggtgaatttctctgcacattctgccgg
agtatagctgacccagagatcgagtattgtgatgaaagcaagaggatcaaaggagatcag
agcctgagtcctgaagaccagcggagatgtgaacgcctgcttctgtatattttctgtcat
gagctcagcatgggctttagggaacctgttgcaagctctgtgcccaactactacaagata
attaagcagcccatggacctaaagaaggtgaagaagaagctgcagctgcgaagctcccag
tattacaagtccacacaggagtttgtgaacgatatgcgccttatcttcaaaaattgtgca
aaatacaacgagatgtctcgaataatccaagtttatgatgaggagaaagagattaatacc
caggcgggatcagagatggcgatatctggtaaggcggtgagcctgtactttgaggagaag
ctgcaggacatattcccggatcagcacttccccgactcgccggagcccgggtcctccgac
gagaaggagaaggagagggaggacgtggacacggaggactccgaggaggacttcattcag
ccgcgacgcaaacggttgaaaacggacgacaagcttgttcacatcaagtaa
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integrated database retrieval system
