Gambusia affinis (western mosquitofish): 122840316
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Entry
122840316 CDS
T07758
Symbol
dync1i2a
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04145
Phagosome
gaf04814
Motor proteins
gaf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122840316 (dync1i2a)
09142 Cell motility
04814 Motor proteins
122840316 (dync1i2a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122840316 (dync1i2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122840316 (dync1i2a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gaf04812
]
122840316 (dync1i2a)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
122840316 (dync1i2a)
Cytoskeleton proteins [BR:
gaf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
122840316 (dync1i2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML
Dynein_IC2
WD40
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_HPS5
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_IP5PC_F
Beta-prop_WDR11_1st
Motif
Other DBs
NCBI-GeneID:
122840316
NCBI-ProteinID:
XP_043988539
LinkDB
All DBs
Position
LG11:15222535..15247414
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AA seq
592 aa
AA seq
DB search
MSDKSELKAELERKKLRLAQIREEKRRKEEERKKADQQQKEVSQQQDDSDLEKKRREADA
LLQSMGITPDAAVAPPSTTPAPKSAETPSETGSQDSDGAVGPRRVTPKLGMAKVTQVDFP
PRETVSYTKETQTPAPAQAKEEEEEEEEIAPIAQPVVEDQTENLDQKEEEEAPPHELTEE
EKLQILHSEEFANFFDQSTRVIERALSEHVDIFFDYSGRDLEDKEGEIQAGAKLSLNRQF
MDERWSKNRVVTCLDWSPQVIFSDNCSLDLGTFSSSLFVSLATPAGSAVMSAAFAKFHPN
VIVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVNIVGTQNAHNLISISTDGK
ICSWSLDMLSQPQDSMELVFKQSKAVAVTSMSFPLGDVNNFVVGSEDGSVYMSCRHGSKA
GISEMFEGHHGPITGIHCHTAAGPLDFSHLFVTSSFDWTVKLWSTKNNKPLYSFEDNSDY
VYDVMWSPTHPALFACVDGVGHLDLWNLNNDTEVPTASVVVEGSPALNRVRWAHTGREIA
VGDSDGRVLVYEVKEQIAVPRNDEWTRFVCTLAEINENRDDAEELAAQRLAA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaaagtgagctgaaagcagaactcgaaaggaagaagctacgtttggcacaa
atccgggaggagaaaagaaggaaggaggaggagcgaaagaaggcggaccaacagcagaaa
gaagtttcacaacagcaggatgactccgacctggagaaaaaaagacgagaagctgacgct
cttctgcaaagtatggggataacaccagatgctgcagttgcccctccttccacgactcct
gctcccaaatcagcggaaactcctagtgaaaccggcagccaggactctgatggagccgtg
ggacccaggcgtgtgactccaaaactgggaatggccaaagtcacacaggtggacttccca
ccacgtgaaacggtgtcctacaccaaggagactcagacaccagcccctgcccaggctaag
gaagaggaagaagaggaggaagaaattgctccaattgctcaaccagtagtcgaggatcaa
actgagaacctggaccagaaagaagaagaagaagccccgccgcatgagctgaccgaggag
gaaaaactccagatcctccactccgaggagtttgctaacttcttcgaccagagcactcgc
gttatcgagcgagcgctctccgagcatgtggacatcttctttgactacagcggtcgtgac
ctggaggataaggaaggggaaatccaggcgggagcgaagctttcactgaacaggcagttt
atggacgagcgctggtccaaaaatcgggtcgtcacctgtctggactggtctccacaggtg
attttctctgacaattgcagtctggatctggggacgttcagcagtagtttgtttgtgagc
cttgcaactccagctggatcggccgtgatgtctgcagcgtttgcaaagtttcacccgaat
gtcatcgttggagggacgtactctggccagatcgttttgtgggacaacaggagcaataag
aggacccctgtgcagaggactccgctctcagcagcagcacacacgcacccggtgtattgt
gtgaacatagtcggcacgcagaacgcccacaacctgatcagcatctcaacggacggcaag
atctgctcctggagcctggatatgctctcccagccgcaggacagcatggagctcgtcttc
aagcagtccaaagccgtcgccgtcacctccatgtccttccctctcggagacgtcaacaac
tttgtggtgggcagcgaggacggctccgtctacatgtcgtgtcgtcatggaagcaaagcg
gggatcagcgagatgtttgagggccaccacggccccatcaccgggatccactgccacaca
gctgcaggaccgctggacttctcccacctgtttgtcacctcgtccttcgactggaccgtc
aaactgtggagcaccaagaataacaagccgctctactcatttgaagacaactccgactac
gtgtatgacgtcatgtggtctcccactcacccggctctctttgcatgcgtggacggcgtc
ggccacctggacctgtggaacctgaacaacgacaccgaggtccccactgctagcgttgtg
gtggaggggagcccggccctcaacagggtcagatgggctcataccgggagagagatcgca
gtgggagactccgatggacgcgttctggtttatgaggttaaagagcaaattgcagttccg
cgaaacgacgagtggacgcgcttcgtctgcacgctggcagagatcaacgagaacagagac
gacgcggaggagctggccgctcagcgtctggctgcgtga
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