Gambusia affinis (western mosquitofish): 122840332
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Entry
122840332 CDS
T07758
Symbol
lmo7a
Name
(RefSeq) LIM domain only protein 7 isoform X1
KO
K06084
F-box protein 20
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
122840332 (lmo7a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122840332 (lmo7a)
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122840332 (lmo7a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
PDZ_6
PDZ
PDZ_2
Motif
Other DBs
NCBI-GeneID:
122840332
NCBI-ProteinID:
XP_043988563
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All DBs
Position
LG11:9887636..9947938
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AA seq
1400 aa
AA seq
DB search
MMEWREQSSVSSEEAYLEAQRWIEAATKKKFGNGDFRSALENGVLLCDLINKIKPGTIKR
VNRLPTPIAGLDNLNVFLKACGKLGLKEAQLFHPGDLQDLSTRVTVKHQETNRRLQNVLI
TIYWLGRRAQSDRFYDGPYLNFKAFEGLLGTALYKALQESNSQKGSSVRDSGFGDSWYSE
REEIYSLRGGGGGGGGHRRDDSLDSLDSLGSRPHSISSDATLKGSSEGCCSDTEADSIFR
MADNKNSLSYRRSLVITPKASAQFNQFLPTKDKQSGYVPAPLRKKRAERNEDSRRSWASS
SFAEDEATLTRQQQTQESSDGSKSTSDIQVDPSIIRQNRFEELQKYREQIKESEDKWQDD
LSKWKNRRRSVNSDIVKKKEEREKIEQTTYGSDGRSKTFKEIQEERDTKKRNSIGSRLSS
LSYLDDDDNVFEKPAIRAPTRSLPARSYTIDVPSYSPEPSKPSPKVKEPPTASPRTRRPP
SPPTPQEPVDGPAAKNSPTTTTTTNTTTTTNTTTNQSTAPASYQKSPVEEREAIKYTEKT
TRDVPTHSSFASTQKELKPRPSLLGAPTVVEAPSSSSLDRQPQLSSMEPKPPTVSRVSAS
LPRSYQRSDSARLTSVVAPRPFGTQPSRISSLSRAHTMDESHKGVNGNVDVSKKASVPSR
YHQYMTSEDEAQSSSAHSSNDEEEEEEKEEENATAKGLSLTQSISSLLSPVESEVSVSPA
PSKETSKEDFCEMRISLNQKPNSSRDFGFQAAWDSTGARVTSIQPGSSAEMCQLQVRDEV
LTVNGLQVAQMSYAQWKSSLEEALQKGTLVMDVRRHGQHNWDRDQPSLPFKSHKTINLTS
TDHPTLLGPPETKTANSSLDFTSGSVTESVLAKQPPTLPLVDVASSRVNGDFQDQPVTMR
NKESEPISLKNLKRRSEFFEQGGSESAMPDIPVPAITPTSSSRWSWNPEEERKRQEKWQK
EQELLLQEKYKRDQEKLQEEWLKAQQEIVTSVGHQVNSHGVSPHSPPSSLQQPALWEEEE
RQRKVEQERQRQAEERRRREEEERELQRLQEERKRREMQAEEEREKREVELRMQRTREEE
LRKREEEQKREEEWEKKRRQQEEAAEQQRRQKAFEQQRWASASHDFDSAHPPLSFTDRTK
SQSSPQLDDDDKPQRRAVGSTAPDGKSQQPLSQAELERQQILNEMKKKTPLLTDSSWIRQ
RAANTAVNRDGDVPPMRRGESLDNLDSSYDSRRSSWTPRSSSFASNYSRPYSGYSGSSSF
YTGASGPRRPVSSTLPPSFSAGSLRGGAGTYSAPWSRPSLSPSTPSPVTSPEPAPDAYQQ
RNRSVSGRKTCTFCDTPLGKGAAMIIESLGLCYHLGCFKCIDCKSDLGGSEAGAEVRIRN
KQLFCNTCYMRVKIGQPTSM
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtggcgtgagcagtcctccgtcagcagtgaggaagcatacttggaggcgcaa
agatggatcgaggcagcaaccaagaaaaaatttgggaacggcgacttccgatcagccctg
gagaatggagttctgctgtgtgatctgataaacaagatcaagcctggcaccatcaaaagg
gtcaacaggctccctacacctattgctggactggacaaccttaacgtcttcctcaaggct
tgtgggaagcttggactaaaggaggcgcagctctttcaccccggggatctgcaagacttg
tccaccagagtgacagtaaagcatcaagagacaaacaggaggctgcaaaatgttttaatc
accatttactggctgggtaggagagctcagagtgatcgtttctatgatggaccttaccta
aatttcaaggccttcgagggattattaggcactgcactatacaaggctctgcaggaatca
aacagtcagaagggctccagcgttcgagacagtggttttggagacagttggtactctgag
cgagaggagatctattctctgagaggaggtggaggcggaggaggaggacacaggagggac
gactcgttggacagtttggactcgctgggctcgagaccccacagcatctcatctgacgcc
actctgaaaggcagcagtgagggttgttgcagcgacaccgaggcagactccatcttcagg
atggctgacaacaagaacagcctcagctaccgcaggtcactagtcatcacgcctaaagcc
agcgcccagtttaaccagttcctgcccactaaagacaagcagtcgggctacgtgccggct
ccgctgaggaagaaacgggctgagcgcaacgaggacagccggcgtagctgggccagctcc
agctttgcagaagatgaagccacactcaccagacagcagcaaacgcaagaaagttctgat
gggagcaaatcgacaagcgacatccaggtggacccctcaatcatccggcagaatcgcttc
gaagagcttcagaagtaccgcgaacagattaaagagagtgaggataagtggcaagatgac
ctgagcaaatggaaaaaccggcgccggagcgtgaactctgatatagtgaagaagaaggag
gagcgggagaagatagagcagaccacgtacggcagcgacggcaggtccaagaccttcaag
gagatccaagaggagagagacactaaaaaaaggaacagcatcggcagccgcctgtcgtct
ctctcctacttggacgacgacgacaacgtatttgagaaacccgcaattcgcgcaccgacc
cgatcacttccagccagaagctacaccatcgacgttccctcgtattccccagaaccctcc
aagccctctccgaaagtcaaggagccccccactgcttccccacgtactcgcagaccgcct
tcgcctcccactccgcaggaacccgtggacggtcctgcagccaaaaactcccccaccacc
accaccactaccaacaccaccaccactaccaacaccaccaccaaccagtctacagcacct
gcatcctaccagaagagtccagtggaggaacgcgaggccataaaatacacagagaaaact
acgagggacgtacccacccactcctccttcgcctccacccagaaggagctcaagccaagg
ccctcattgttgggagcaccgactgtggtggaggccccctcctccagctctctggacaga
caaccacagttgagctcgatggaacccaagcctcccaccgtgtctcgggtttccgcctct
ctccccaggagctaccagagatcggatagcgcgcggctaacctcggtcgtcgctccgagg
ccctttgggacccagccgtcccgcatctcctctctttccagagcccacacaatggacgaa
tcccacaagggtgtcaatggcaacgtcgatgtttctaagaaggcgtcagtgccgagccgg
tatcaccagtacatgacctcagaggacgaggctcagtccagttctgcacacagcagcaat
gacgaggaagaggaggaggaaaaggaagaggagaacgccacagcgaagggcctgtccttg
actcagagcatcagttctctcctgtctcctgtcgagagtgaagtctcagtcagtcctgct
cctagcaaagaaaccagcaaggaggatttctgtgagatgcgaatcagcctgaaccagaaa
cccaacagcagccgagactttggcttccaggctgcctgggactcaacgggagctcgggtc
acgtccatccaaccaggtagctcggccgagatgtgccagttgcaggtcagggacgaagtg
ctgacggtgaacgggctccaggtggcacaaatgagttacgcgcagtggaagtccagcttg
gaggaggctctgcagaagggcaccctggtcatggatgtgcgccgtcacggccagcacaac
tgggacagagatcaaccttccctgccttttaaaagccataagaccatcaatctgaccagt
acggatcatccgacacttctaggtccccctgagacaaagaccgccaactccagcctggat
ttcacttccggtagcgtcacagaatcggtgctggctaaacagccccccactcttcctctg
gtggacgtggcttcaagcagagttaatggggacttccaagaccaaccagtgaccatgagg
aacaaagaatcagaaccaatatctttgaaaaacttaaaacggagatcagagttttttgaa
caaggaggatcggagtctgcgatgccagatatccctgttcctgcaatcactccaacttcc
tccagccgctggtcgtggaacccagaagaagagcgcaagagacaagagaaatggcagaag
gaacaagagctcctcctacaggaaaaatacaagcgtgatcaggagaagctgcaggaggag
tggctcaaggctcagcaggagattgtcacaagcgtgggccaccaggtgaacagccatggt
gtcagcccacactcgcccccgtcttctctccaacagcccgctctgtgggaagaggaggag
aggcagaggaaggtggagcaggagcgccagcggcaggcggaggagaggaggaggagggaa
gaggaggagcgggagctccagcgactccaggaggagaggaagagaagagaaatgcaggcg
gaggaggagagggaaaaaagggaggtggaactgagaatgcaaaggacgagagaggaggag
ctaagaaagagggaggaggagcagaagagagaggaggagtgggagaagaagcggaggcag
caggaggaggcggcggagcagcagcgcaggcagaaagccttcgagcagcagagatgggcc
tctgcctcccacgactttgacagtgctcacccaccactgtcctttactgacaggacaaaa
tcccagtcgtctccccagctggatgatgacgacaagcctcagaggagagcggtgggaagc
acagctcctgacgggaagagtcagcagccgctgtcgcaggccgagctggagcgccagcag
atcctgaatgagatgaagaagaagacgccgctcctgacggacagcagctggatccgccag
cgcgccgccaacacggccgtcaacagggacggcgacgtgccgcctatgcgcagaggggaa
tctcttgacaacttggactcctcctacgactctcggcgttcatcctggactcccagaagc
agctcttttgcctcaaactactctcggccgtattctggctactctggcagctcttctttt
tacaccggcgcgtcggggccccgccggccggtctcctccaccctgcccccctccttctct
gcgggttccctccgcggtggggcaggaacttactcggccccttggtcccgtccgtccctc
tccccttccactccgtcaccagtcacctctccagagcccgcacctgacgcctatcagcaa
cggaacaggtcagtgagtggcaggaaaacctgcacgttctgtgacaccccgctgggaaag
ggagcagccatgatcatcgagtccctcgggctctgttatcatttgggctgtttcaagtgc
atcgactgcaagtccgacctcggcggctcggaggccggggccgaagtcagaatacgaaac
aagcaactcttctgtaacacctgctacatgcgagtcaaaattggccagccaacatccatg
tga
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