KEGG   Gambusia affinis (western mosquitofish): 122840340
Entry
122840340         CDS       T07758                                 
Name
(RefSeq) tubulin alpha chain
  KO
K07374  tubulin alpha
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf04145  Phagosome
gaf04210  Apoptosis
gaf04530  Tight junction
gaf04540  Gap junction
gaf04814  Motor proteins
gaf05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    122840340
  09143 Cell growth and death
   04210 Apoptosis
    122840340
  09144 Cellular community - eukaryotes
   04530 Tight junction
    122840340
   04540 Gap junction
    122840340
  09142 Cell motility
   04814 Motor proteins
    122840340
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    122840340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gaf03019]
    122840340
   03036 Chromosome and associated proteins [BR:gaf03036]
    122840340
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:gaf04812]
    122840340
   04147 Exosome [BR:gaf04147]
    122840340
Messenger RNA biogenesis [BR:gaf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     122840340
Chromosome and associated proteins [BR:gaf03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     122840340
Cytoskeleton proteins [BR:gaf04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    122840340
Exosome [BR:gaf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122840340
  Exosomal proteins of other body fluids (saliva and urine)
   122840340
  Exosomal proteins of colorectal cancer cells
   122840340
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 122840340
NCBI-ProteinID: XP_043988586
LinkDB
Position
LG11:20776106..20778843
AA seq 481 aa
MLVYISPASPFFLHFCLVSESSSSVEGQADKMRECISMHVGQAGAQMGNACWELYCLEHG
IQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHP
EQLITGKEDAANNYARGHYTIGKEIIDLVLDRTRKLADQCTGLQGFLIFHSFGGGTGSGF
TSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI
YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL
ATYAPVISAEKAYHEQLSVADITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVN
SAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWA
RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGTDSMGDEDEEGEE
Y
NT seq 1446 nt   +upstreamnt  +downstreamnt
atgcttgtgtatataagccctgcctctcccttttttctgcacttctgccttgtgtctgaa
tcctcatcgtcagtcgaaggacaagcagacaaaatgcgtgagtgtatttctatgcatgtt
ggccaagctggagcccaaatgggcaatgcatgctgggagctgtactgtctggaacatgga
atccagccagatggtcagatgccttctgacaagactattggaggaggggatgactcattc
aacaccttcttcagtgagacaggggcaggaaagcatgtacccagggccatctttgtcgat
ctggaacctactgtcattgatgaggtgcgtacaggaacctaccgacagctgttccaccct
gagcagcttattacaggaaaggaagatgctgccaacaactacgcacgtggtcactacacc
atcggcaaggagatcatagaccttgttctagataggacacgtaaactggctgatcagtgc
actggtctgcaaggtttcctcatcttccactcctttggaggaggaactggttctggtttt
acctccctgctgatggaaagactctctgtcgactatgggaaaaagtccaaacttgaattt
gctgtctatccagcaccccaggtttccacagcagtagtggagccttacaactccattcta
accacccacaccacactggagcactccgattgtgctttcatggtggacaatgaggccatc
tatgatatctgccgcagaaatcttgacattgagagaccaacctacaccaacttgaacagg
cttattggtcagattgtgtcttcaatcacagcatccctgcgttttgatggagccctgaat
gttgacctgacagagttccagaccaacttggtgccttatcctcgtatccacttccctctg
gccacttacgctccagtgatctctgctgaaaaagcctaccatgagcaactatctgtggct
gacatcaccaatgcatgctttgaaccagctaatcagatggtgaaatgtgacccacgtcat
ggcaaatacatggcttgctgtctgctataccgtggcgatgttgtacccaaagatgtaaac
tcagccattgctgccatcaaaaccaaacgtaccatccagtttgtggactggtgtcccaca
ggtttcaaggtgggaatcaactaccagcctcctactgtagttcctggaggagaccttgct
aaggtgcaaagagctgtgtgcatgttgagcaacaccaccgccatcgctgaggcctgggcc
aggctcgaccacaagtttgatctcatgtatgccaagagagcctttgtccactggtatgtt
ggagagggaatggaggagggagagttctcagaggccagagaagatatggctgctttagag
aaggattatgaagaggtgggcactgacagcatgggagatgaagatgaagagggagaggag
tattaa

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