Gambusia affinis (western mosquitofish): 122840340
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Entry
122840340 CDS
T07758
Name
(RefSeq) tubulin alpha chain
KO
K07374
tubulin alpha
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04145
Phagosome
gaf04210
Apoptosis
gaf04530
Tight junction
gaf04540
Gap junction
gaf04814
Motor proteins
gaf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122840340
09143 Cell growth and death
04210 Apoptosis
122840340
09144 Cellular community - eukaryotes
04530 Tight junction
122840340
04540 Gap junction
122840340
09142 Cell motility
04814 Motor proteins
122840340
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
122840340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122840340
03036 Chromosome and associated proteins [BR:
gaf03036
]
122840340
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gaf04812
]
122840340
04147 Exosome [BR:
gaf04147
]
122840340
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122840340
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
122840340
Cytoskeleton proteins [BR:
gaf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
122840340
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122840340
Exosomal proteins of other body fluids (saliva and urine)
122840340
Exosomal proteins of colorectal cancer cells
122840340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
122840340
NCBI-ProteinID:
XP_043988586
LinkDB
All DBs
Position
LG11:20776106..20778843
Genome browser
AA seq
481 aa
AA seq
DB search
MLVYISPASPFFLHFCLVSESSSSVEGQADKMRECISMHVGQAGAQMGNACWELYCLEHG
IQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVPRAIFVDLEPTVIDEVRTGTYRQLFHP
EQLITGKEDAANNYARGHYTIGKEIIDLVLDRTRKLADQCTGLQGFLIFHSFGGGTGSGF
TSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAI
YDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL
ATYAPVISAEKAYHEQLSVADITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVN
SAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWA
RLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGTDSMGDEDEEGEE
Y
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcttgtgtatataagccctgcctctcccttttttctgcacttctgccttgtgtctgaa
tcctcatcgtcagtcgaaggacaagcagacaaaatgcgtgagtgtatttctatgcatgtt
ggccaagctggagcccaaatgggcaatgcatgctgggagctgtactgtctggaacatgga
atccagccagatggtcagatgccttctgacaagactattggaggaggggatgactcattc
aacaccttcttcagtgagacaggggcaggaaagcatgtacccagggccatctttgtcgat
ctggaacctactgtcattgatgaggtgcgtacaggaacctaccgacagctgttccaccct
gagcagcttattacaggaaaggaagatgctgccaacaactacgcacgtggtcactacacc
atcggcaaggagatcatagaccttgttctagataggacacgtaaactggctgatcagtgc
actggtctgcaaggtttcctcatcttccactcctttggaggaggaactggttctggtttt
acctccctgctgatggaaagactctctgtcgactatgggaaaaagtccaaacttgaattt
gctgtctatccagcaccccaggtttccacagcagtagtggagccttacaactccattcta
accacccacaccacactggagcactccgattgtgctttcatggtggacaatgaggccatc
tatgatatctgccgcagaaatcttgacattgagagaccaacctacaccaacttgaacagg
cttattggtcagattgtgtcttcaatcacagcatccctgcgttttgatggagccctgaat
gttgacctgacagagttccagaccaacttggtgccttatcctcgtatccacttccctctg
gccacttacgctccagtgatctctgctgaaaaagcctaccatgagcaactatctgtggct
gacatcaccaatgcatgctttgaaccagctaatcagatggtgaaatgtgacccacgtcat
ggcaaatacatggcttgctgtctgctataccgtggcgatgttgtacccaaagatgtaaac
tcagccattgctgccatcaaaaccaaacgtaccatccagtttgtggactggtgtcccaca
ggtttcaaggtgggaatcaactaccagcctcctactgtagttcctggaggagaccttgct
aaggtgcaaagagctgtgtgcatgttgagcaacaccaccgccatcgctgaggcctgggcc
aggctcgaccacaagtttgatctcatgtatgccaagagagcctttgtccactggtatgtt
ggagagggaatggaggagggagagttctcagaggccagagaagatatggctgctttagag
aaggattatgaagaggtgggcactgacagcatgggagatgaagatgaagagggagaggag
tattaa
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