Gambusia affinis (western mosquitofish): 122840431
Help
Entry
122840431 CDS
T07758
Name
(RefSeq) TBC1 domain family member 8
KO
K19951
TBC1 domain family member 8/9
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122840431
Membrane trafficking [BR:
gaf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122840431
Endosome - Golgi transport
Rab GTPases and associated proteins
122840431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
PH-GRAM_MTMR6-like
Motif
Other DBs
NCBI-GeneID:
122840431
NCBI-ProteinID:
XP_043988797
LinkDB
All DBs
Position
LG11:complement(7563667..7586252)
Genome browser
AA seq
1120 aa
AA seq
DB search
MWLNPEEVLLKNALKLWVTVRSNDFFLLQKRRGHGEHTNKITGLLVGALDTVLDSNARVT
PFRILLQVPGSQISWVIASGATIEEVNKHWDWLVHNLLQSLSVFENKEDAASFVKGKVKG
LIAEEVRGRQAAQEEDPEKFRDALLKFELHFGLPSSEKLVTYYSCCCWKGRVPRQGFLYL
SVNHMAFYSFLLGKEVKFVIPWAEVTRLERVSTALMPEAIRVTTRKRQREFSMFLNLDEA
FGVMGQLADITLRRLLDSVGLELDRVLQQTARITKRILEEQAIREYVLALFRLPRSEKLY
EVASCSVWTPHSRSHTAGTLYTTDGYLCFSSREEGSCTLLIPLSEVLSIEKAESTSSLPN
PVIVSMRTKKAFQLIDLQDRDDLVESMNSRLRTLQWKHSVFRSRKGSRRSVSSPTPYYTF
YYDTGEEEVEEQVLRNTVNSEALMTAFHQSRPGDNGNKSMELVKERLWEEHFTEFGRGVH
MFRTEKIQKLVAMGIPESLRGELWMTFSDACSELDSHQGYYAGLVQKSMGHSNLATDEIE
RDLHRSLPDHPAFQNPTGIAALRRVLTAYAHRNPKIGYCQSMNILASVLLLYAKEEEAFW
LLVAVCERMLPDYFNRRVIGAQVDQSVFEELIRERLAELAEQVPDLSTLSSVSLSWFLTL
FLSVLPFQSAVCVVDCFFFQGIKSIFQLGLAVLDANAAQLSACTDDGQALMILTSFLDQV
GSEESPCVSPPPSAAEENGCSDADAPAVRHTNITDLISEALAKFRDLTVRHIERLRCLHR
VRVLQAHEDTIKENTLRLVSPDVSISPENLSDLYDLFKTEHFITLYWGDSSSAAAAEAAA
WQHGDSGHSFVERQYRLDRPQFKSLYGLLAPWPSGSSQHADTLSNRTFTLLAPDRDNLVT
FKEFASWLDTLYCEELNEKIRLLYRLHIPPALTESDDEASLRSPLLSTNRPLYVNKETPG
REDDDLKDYQEQLKQMLQDLVKEKEKDADKPLPLMNQREFIQFCKTLYSMFHGDPEENDL
FQAIATVTSLVLQIGEAGHREQTKASAEKPAKPTASCDGALAAADEWTVSYAQILASLLT
EQALVNFFDKPADLTEMIAQAKRNQYQQRAGLLSLQSGTR
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgaacccggaggaagttctgctgaaaaacgctctgaagctctgggtgaccgta
aggagcaacgacttcttcctgctgcagaagaggagaggccacggagagcacacaaataag
ataacaggtctcctggttggggcgctggacacggtgctggactccaatgccagggtcacg
ccgttccgcatcctgctgcaggttcccggctctcaaatcagctgggtcatcgccagcgga
gccaccatagaggaggtgaacaagcactgggactggctggtccacaacctgctccagtct
ctgtctgtttttgagaacaaagaggatgctgccagcttcgtcaaaggaaaagtcaagggc
ctcatcgcagaggaggttcgggggcgtcaggccgcccaggaggaggatccagaaaagttc
agagacgcccttctgaagtttgagctgcacttcggcctcccttcgtcagagaagctggtg
acctattactcctgctgctgctggaagggccgggtgcctcggcagggcttcctctacctc
agcgtcaaccacatggccttctactcatttctgctgggaaaagaagtgaagtttgtgatt
ccctgggcggaggtgacgcggctggagcgggtctccaccgctctgatgcctgaagccatc
cgggtcaccacccgaaagcggcagagggagttctccatgttcctcaacctggacgaggcc
ttcggggtcatgggtcagctggctgacatcaccctcaggcggctgctggacagcgtaggc
ctggagctggaccgagtgctgcagcagacggcacgcatcaccaagaggatcttggaggag
caggcgatcagagagtacgtcttggccttgttccggctcccgcgctcagagaagctgtac
gaggtggcgtcgtgctcggtgtggacgccgcacagccgctcccatacggccgggacgctc
tacaccaccgacggctatctgtgtttctccagcagagaggagggcagctgcactctgctc
atccccctctctgaggttttgtccatagaaaaagcagagagcaccagctcccttcccaac
ccggtcatcgtgagcatgcggaccaaaaaggccttccagctgatagacctgcaggaccga
gacgacctggtggagagcatgaactcccggctgcgcacgctgcagtggaagcactccgtg
tttcgcagcaggaagggcagcaggaggagtgtgtcgtcccccacaccctactacaccttc
tactacgacactggcgaggaggaggtggaggagcaggtcctccgtaacaccgtcaacagc
gaagctctcatgacggccttccaccagagccggccaggagacaacggcaacaagagcatg
gagctggtgaaggagcggctgtgggaggaacatttcactgagtttggccgcggcgttcac
atgtttcgcaccgagaagatccagaagctggttgccatggggatcccggagtcgctgcga
ggggagctgtggatgacgttttctgacgcgtgctccgagctggactcccaccagggctac
tacgccggcctggtgcagaagtcgatgggccacagcaacctggctacggatgagattgag
cgcgacctgcaccgttcgctgccggaccacccggctttccaaaaccccaccggcatcgcc
gcgctcaggcgagtcctcaccgcctacgctcaccgcaacccaaagatcggatactgtcag
tctatgaacatcctcgcgtccgtcctgctgctgtacgccaaagaagaagaagctttctgg
ctgttggtggccgtttgtgagaggatgctgccagactactttaaccgcagggtcatcgga
gcccaggtggaccagtctgtgtttgaagagctgatcagggagcgcctggcggagctggcg
gagcaggtcccggatttgtccacgctctcctccgtctccctatcctggttcctcaccctc
ttcctcagcgtcctgcccttccaaagcgccgtctgcgtggtggactgcttcttcttccag
gggatcaagtccatcttccagctgggcctggccgtgctggacgccaacgccgcgcagctg
tccgcctgcaccgacgacggacaggcgctcatgatcctcaccagttttcttgatcaggtc
gggagtgaggagtcgccttgtgtttccccgccgccgtccgccgcagaggaaaacggctgc
agcgacgccgatgctcctgctgtgagacacacaaacatcactgacctcatcagcgaggcc
ttggcgaaattccgagacctgacggtgcggcacatcgagcgtcttcgctgtctgcacaga
gtccgggttctgcaggcccacgaggacaccatcaaggaaaacactctgcgcctggtgtct
ccggacgtctccatctctcccgagaatctgtccgacctgtacgacctctttaagacggag
cacttcatcactctgtactggggcgacagcagctccgccgcggcggcagaagctgcggcc
tggcagcacggcgactccggtcactctttcgtggagcgacagtatcggctggaccggccg
cagttcaaaagcctctacgggctgctggcgccgtggccgtccgggtccagccagcacgcg
gacacgctctccaaccgcaccttcaccctgctggccccggaccgggacaacctggtcacc
ttcaaggagttcgccagctggctggacacactgtactgtgaggagctgaacgagaaaata
cggctcctctaccgcctccacatccctccagctctgacagagagcgatgatgaagcgtcc
ctcaggagccccctgctgtccactaacaggcccctctacgttaacaaagagactccagga
agagaagacgacgacttgaaagactaccaggagcagctgaagcagatgctgcaggatttg
gtcaaggagaaggagaaagacgcagacaaacctctgccgctgatgaatcagcgagagttc
atccagttctgcaagacgctctacagcatgttccacggcgacccggaggagaacgacctc
ttccaggccatcgccacggtaaccagcctcgtgctgcagatcggcgaggccggtcaccgc
gaacagaccaaagcgtcggcggagaagccggcaaaacccacggcgtcgtgcgacggggct
ctggccgccgccgacgagtggacggtgagctacgctcagatcctggcctcgctgctcacc
gagcaggcgctggtgaacttcttcgacaagccggccgacctgacggaaatgatcgcacag
gccaaacggaaccagtaccagcagcgggcgggtttgctctcgctgcagagcgggaccagg
tga
DBGET
integrated database retrieval system